Acipenser ruthenus (sterlet): 117421414
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Entry
117421414 CDS
T07327
Name
(RefSeq) pro-epidermal growth factor-like isoform X1
KO
K04357
epidermal growth factor
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04010
MAPK signaling pathway
arut04012
ErbB signaling pathway
arut04020
Calcium signaling pathway
arut04068
FoxO signaling pathway
arut04510
Focal adhesion
arut04540
Gap junction
arut04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117421414
04012 ErbB signaling pathway
117421414
04068 FoxO signaling pathway
117421414
04020 Calcium signaling pathway
117421414
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117421414
04540 Gap junction
117421414
09142 Cell motility
04810 Regulation of actin cytoskeleton
117421414
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
arut04052
]
117421414
Cytokines and neuropeptides [BR:
arut04052
]
Cytokines
Growth factors (RTK binding)
117421414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
cEGF
FXa_inhibition
EGF_CA
EGF_3
EGF
Vgb_lyase
DUF5050
EGF_MSP1_1
hEGF
EGF_LRP2
Plasmod_Pvs28
U6-snRNA_bdg
DUF4736
Motif
Other DBs
NCBI-GeneID:
117421414
NCBI-ProteinID:
XP_033891721
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All DBs
Position
1:39860446..39918448
Genome browser
AA seq
1250 aa
AA seq
DB search
MLLAIFLTVVVNVALANPSLALESTCLDGYQLTTDNSTCIDIDECLEGGLGTCGQICHNT
PGSYICSCLPGYTLDDNTWSCYVDAPVPYLIFSHGNAIFRIDREGTNHKRLVTNTGISVL
LDFHYNEERIYWVDSDKGLVQRVFMNGTKREKVCSVGNGISGFTLNWIQKSIIWTNHQKG
SIEVADIDGRNSRVLLENVSQPSSITVDPNQRFIFWISDGLVPSINRANVDGGKVITVLS
TTEKVKTLSLDFIDKRLFWIQYGVDDESAIGSCDYNGDAVHIMKQLTQSQPFGMSLFAEY
IYYSELKTGTIRRANKYTGKDVVVINPKPSFLPPADVKVVHPLKQPAPSQTAEQGCDATK
EDCLSVCTRDADKVQCECRGGYVLSKDGRSCEDVNECAFWNHGCTLGCENIPGSYFCTCP
GGFALLSDMKTCHEIVPCLKNYTECSHSCVQTAIGPVCVCPEGSVLRPDGRTCTGCTAPD
NGGCSQVCVALSPVKWECKCMPGYRLKPDGKHCSSTGPRPYLLFANIQDIRRINFDGTAY
HSLLDKQMGRVLALDYDPVQSKVYFAHTGLKWLERANLDGSEREVLLREDLDYPEGLAVD
WINRKLYWTDRGLSRIERSDLNGVHREVIISEGVNKPRGIAVHPLAKKLFWTDWGEKPCI
ESSSLEGDVRLVIANTTLVSPSGITIDYLADKLYWCDAKRSVIEVADLDGSNRRILTQNE
VGRPFDVAVFEDHVWFTDWEKPSVMRVDKWTGQNRVRLRGNMLRPSSLVVVHPLAKPGAD
PCLYENGGCSQICENRFGVARCLCHEGFVKHADGGVCHPINIALTTPVSRATLSHSQLLM
SNTTLRDEGIPLANPSPSAATEEAAVHKEEQPKSIQVAEIMVSDQDDCSALECDVNAQCF
PAQGGAVCQCLEGFTGDGKACNDIDECAVGIALCSMQLADCINTEGSYVCRCHVGYSGDG
LYCSDIDECKFETHSCDKHADCVNTEGNYTCTCRTGYSGSGFICEEVVAPTSTVRTSSSS
ETTTHWRNDHLEDCPSSYEDYCLHGAVCFHIPEIGSYACNCVTGYMGERCQYSDLEWWEL
QHKEEEKRRNLTIAVCMIILIVLLSVGACVTYCYRSKKYPMKSQYADDMSKTCSSDDSVT
EISTSSGQRFYVVLEHGSRGDGKVIHVVGCNSRRVCHSCSSETGESVVSEEAWNLQRDGK
GLVFVPQVPCSHVQQDTNRTVLHLRQEENLIYLEDSESDVSGESRTPQPV
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgttacttgctatttttttgacagtggtggtcaatgttgctttggcaaacccctctttg
gctctggaatcaacatgcttggatggataccagttgactactgacaattccacttgtata
gacattgatgaatgccttgaaggaggactggggacttgtgggcaaatctgtcacaacact
ccaggctcctacatctgttcctgcttacctggttacacactggatgataacacatggtcg
tgctatgttgatgcccctgtgccctacctcatcttcagccatggaaacgccatcttcagg
attgacagagaaggaaccaatcacaagagactggtgacaaacacagggatctctgtcctg
ttggacttccactataatgaagaaagaatatactgggtagactctgacaagggtcttgta
caaagggttttcatgaatggcaccaaaagggagaaagtatgttcagttggaaacgggatt
tctggatttactctgaactggattcagaaaagcattatctggaccaatcatcagaaggga
agcattgaagttgcagacatagatgggaggaattctagggtacttttagagaatgtatcc
cagcccagtagcatcactgttgatcccaaccaaaggtttatattctggatttcagatgga
ctggtaccaagcatcaatcgagcaaacgttgatggcggaaaggtcatcacagttttgagc
actactgagaaagtaaaaacactgtctctggattttatcgacaaaagactgttttggatc
caatatggcgtggatgatgagagtgccattggatcttgtgactacaatggtgatgcggtt
catattatgaaacaattaacacagtcccagccttttgggatgtctttatttgctgagtat
atatactattcagagttgaaaactggtaccattagaagagccaacaaatacacaggcaag
gatgtcgtcgtcatcaaccccaagccttcatttcttcctcctgctgatgtgaaagtcgtg
caccctctcaaacagcctgcaccctcccaaacagctgagcaggggtgtgatgctacgaaa
gaagactgcttaagtgtgtgcaccagagatgcagataaagtgcaatgtgaatgtagaggc
ggctatgtcctcagcaaagatgggagatcttgtgaagatgtgaacgaatgtgctttctgg
aaccatggctgtactttaggctgtgaaaacatcccaggctcctatttctgtacctgtcct
ggaggtttcgctcttctttctgacatgaaaacctgtcacgagattgtcccatgcttgaag
aactacactgaatgcagccatagttgtgtccagacagctataggacccgtgtgtgtgtgt
ccagaaggatcggtgttaagaccagatggaagaacatgcacaggttgcactgcaccagat
aatggaggctgtagccaggtctgtgtggctttgagtccagtgaagtgggaatgcaagtgc
atgccaggctatcgactgaaaccagatgggaagcattgtagttcaacaggtcccagacct
tatttgctttttgcaaatatccaagacattcggcgcatcaattttgatggcacagcttac
cacagtctactagataagcagatggggagagtcttagctttggactatgaccctgttcaa
agtaaggtttattttgcgcacacaggtctgaagtggctggaaagagctaacctggacggg
agtgaacgtgaggtgctgctgcgtgaagacctggattatcctgaagggctagctgtagac
tggattaaccgtaaactgtactggactgaccgagggctgtccagaattgaaagaagtgac
ctaaatggtgttcacagagaagtgatcatcagtgagggtgttaacaagccaagaggaata
gctgtgcacccactggcaaagaagctgttctggacggactggggtgaaaagccttgtata
gaaagctcttccttggaaggtgacgtccgactggttattgccaacaccacccttgtttca
ccgagtggaatcaccatagactacctggcagacaagctgtactggtgtgatgccaagcga
tcagtcatcgaagtggcagatctggatggctccaaccgacggatcctgacacagaacgaa
gtaggacgcccttttgatgtagccgtgtttgaagatcacgtttggttcactgattgggag
aagccatccgttatgagggttgacaagtggacagggcaaaaccgggtgcgtcttcgaggg
aatatgcttagaccctcctccttggttgttgttcacccattagccaaaccaggtgctgat
ccctgcctgtatgaaaatggtggctgtagccaaatttgtgagaacaggtttggagttgct
cgctgcttgtgtcacgagggctttgtaaagcatgccgatggtggagtctgccaccctatc
aacattgccttgacaactccagtgtctcgtgcgaccctttctcacagtcagctcttgatg
tcaaacaccacattaagagatgaaggcattccactggctaatcccagcccatcagcagcc
actgaggaggctgctgtacacaaagaggagcagcccaaaagcatccaggtggcagagata
atggtatcagatcaagatgattgctctgctcttgaatgtgatgttaatgctcagtgtttc
ccagcacaagggggcgctgtttgtcaatgtttggaaggatttaccggcgatggcaaagca
tgcaatgacattgatgaatgtgctgttggcattgctctgtgcagcatgcagcttgcagac
tgcattaacacagagggtagctatgtctgcaggtgccatgttggctacagcggggatggc
ttgtattgctcagatatcgacgagtgtaagttcgaaacccacagctgtgacaaacatgcc
gattgtgtcaatacagagggaaactacacctgcacatgtaggactggatattctggatca
ggcttcatctgtgaagaagtggttgctcctacctctacagtgaggaccagcagttcctct
gaaactaccacccactggcgcaatgatcacctggaggactgcccgtcttcatacgaggac
tactgtctccacggagcagtgtgcttccacattccagagatcggatcctacgcatgcaac
tgtgtgacaggctacatgggggaacggtgccagtacagtgacttggagtggtgggagttg
caacacaaggaagaggagaagaggcgcaaccttactattgcagtctgcatgatcatactg
atcgtactcctgtctgtaggagcctgcgtaacgtactgctacaggtctaagaagtaccca
atgaagagtcagtatgctgatgacatgagtaagacctgcagcagtgacgacagcgtaacc
gaaatttccaccagcagtgggcaacggttctatgttgtcctggaacatggctcaagaggg
gatggcaaagttatccacgtggttggttgtaacagcagacgggtttgccattcctgttcc
tcagaaacaggagaaagtgtagtgtctgaggaagcttggaatttgcagagggatgggaaa
ggcctggtttttgttccccaggtgccttgcagccatgtgcagcaggacaccaacaggact
gtcctccatcttagacaggaggagaacctcatatacctggaagatagtgaatcggatgtg
agtggggagagcaggacacctcagcctgtttga
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