KEGG   Acipenser ruthenus (sterlet): 117426610
Entry
117426610         CDS       T07327                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 2B-like
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    117426610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:arut03000]
    117426610
   04121 Ubiquitin system [BR:arut04121]
    117426610
   03036 Chromosome and associated proteins [BR:arut03036]
    117426610
Enzymes [BR:arut01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     117426610
Transcription factors [BR:arut03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    117426610
Ubiquitin system [BR:arut04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     117426610
Chromosome and associated proteins [BR:arut03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117426610
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     117426610
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD F-box JmjC Cupin_8 RPA43_OB
Other DBs
NCBI-GeneID: 117426610
NCBI-ProteinID: XP_034781146
LinkDB
Position
12:complement(4872719..4919812)
AA seq 1285 aa
MEAHAESGRRLRTISRRMYDENEDLSDVEEIANIRSFNLEEKLRSESYNASYVMSMEGKD
FTYGYVQREALRVPLIFKAKDGLGINMPDSDFNVSEVKGLVGSRRAVDVMDVSTQKGTEM
SMAQFVRYYETPEAERDRLFNVISLEFSHTKLENLIKRPIVVDLVDWVDNMWPQHLKEKQ
IEATNAISEMKYPKVQKYCLMSVKGCYTDFHIDFGGTSVWYHIHRGGKVFWLIPPTPHNL
ELYEEWVLSGKQSDVFLGDRVDGCERIELKQGYTFFIPSGWIHAVYTPEDTLVFGGNILH
SFNIPMQLTIYEIENRTKVHAKFRYPFYYEMCWYVLERYVYCLTKRSHLIKDFRRDSMLI
DAERKPSTESFSSDSRLDMDEESGDAQVTEEGLEKSVRSSLDDSCSPETKDKKHKPSGGG
GRHLKRTLSNDSDDSTKSTTPLDFPKTPSGSPVSEASNKWTHLTEFELKGLKALVEKLES
LPENKKCVPEGIEDPQVLLEDMKVVLKEHADDDPKLAITGVPVVCWPKKTVKQRGGGRPK
GKLGASAAVKLAANRASAGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSC
IMRQCIAPVLPHTAVCLVCGEAGKEDTVEVEEDKFNVMLMECSICNEIVHPGCLKVKDAG
GVVNDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPGSLLKEQRVSRDTKEETEAAAP
ARRKVECEETPKRKAQEEPAKKRAPPTPDALPRRKTDEGPLRRKRRQFDDSTEPSIRKKR
RSWKTPDDRALIPKPLRQIKTEPEEEEEEEEEEEEEEEEEEEQEREEEEEEGCWEGGGDL
SDRTLKTRESDQSRSSSPRAGPSSEGGNEPHEKGRLRARRKRRLANKELSKELSKELNLE
IQKTEDCLAHENCQALKSEPESESEEPKRNNGSSRSARLHRSARENGNTRELRNHRRLQQ
LSPPSTPVSPVSARPPSSHSPPKCMQMERHVIRPPPISPPPDSLPLEDGEVHVMRREVWM
GVFGYLSHKELCVCMRVCKTWNRWCCDKRFWTKINLNRCKSITPLMLSGIIRRQPVTLDL
SWTNISKKQLSWLINRLPGLRVLLLSGCSWVAVSALCTSNCPLLRTLDVQWVEGLKDTQM
RDLLSPPTDNRPGQIDNRSKLRNVVDLRLAGLDITDASLRLIIRHMPLLSKLDLSYCNHI
TDQSINILTAVGTTTRDSLTEINLSVCNRVTDQCLTYFKRCGNICHVDLRYCKQVSKESC
EQFIAEMSVSVQFGLVEEKLLQKLS
NT seq 3858 nt   +upstreamnt  +downstreamnt
atggaggcgcatgcagaatctggacgcagactgcgcaccatcagtagaagaatgtacgac
gaaaacgaagacctctctgatgtggaggagatcgcaaacatccgaagttttaatttggaa
gagaagcttagaagcgaatcttacaacgccagctatgtgatgtcgatggaaggaaaagat
tttacctatggttacgtgcaaagggaagcactccgggttcctctcatatttaaagccaaa
gatggactggggataaatatgcctgacagtgactttaacgtcagtgaagttaaaggacta
gtaggaagccgtcgagcggtggacgtgatggacgtcagcacccagaaggggacggagatg
agcatggcgcagttcgtcagatattacgagacccccgaggctgagagagaccggctcttc
aatgtcatcagcctggagttcagccacactaaactggagaacctgatcaagcggcccatt
gtggttgatttggtcgactgggtggacaacatgtggccacagcacttaaaggagaaacag
attgaagccacaaatgccatttcagagatgaagtaccccaaagttcaaaagtactgcttg
atgagtgtgaagggctgctacactgactttcacattgatttcgggggcacatctgtgtgg
taccacattcacaggggagggaaggtgttctggttaattcctccaacgcctcataatttg
gagctgtacgaggagtgggtcctgtccgggaagcagagcgatgtgtttctgggagaccga
gtcgatgggtgcgagaggattgaactgaagcaaggatacacgttcttcatcccatcagga
tggatccatgcagtctacactccggaggacactttggtgtttggaggcaacattctgcat
agctttaacattcccatgcagctgaccatctatgagattgaaaacaggacaaaggttcat
gccaaattccgctaccctttctactatgagatgtgctggtatgtcttggagagatacgtg
tactgcttgactaaacgctctcatctcatcaaggacttccggagggattcaatgctaatt
gatgcagagaggaaaccgagcacagagagcttctcttcggattctcgactagacatggac
gaggagtcgggcgacgcccaggtgacagaggaggggctggagaagagcgtccggtcctcg
ctggacgactcctgctccccagagaccaaagacaagaaacacaaaccatcgggtggcggt
ggtcgccacttgaaacggactctgtcaaacgactcggacgacagcaccaagtcaaccacg
ccgctggactttcccaagactccgtcgggatcccccgtttcagaagcgtcaaacaagtgg
acccacctgacggagttcgagctcaaagggctgaaggcgctggtggagaagctggagtcc
ctgccggagaacaagaagtgtgtccctgaggggatcgaggacccgcaggtgctgctggag
gacatgaaggttgttctgaaggagcacgcagatgacgaccccaagctggctattacgggg
gtgcctgtggtgtgctggcccaagaagacagtgaagcagaggggcggggggaggccgaag
gggaagctgggtgcctcggcggcggtcaagctggccgcaaacagagcctctgcgggggcg
cggcggaggaggacgcgatgccgcaagtgtgaggcctgcctgcggaccgagtgcggggag
tgccacttctgcaaggacatgaagaagttcgggggtccgggcaggatgaagcagtcctgc
atcatgaggcagtgcatcgcgcctgtgctcccccacaccgccgtgtgtctggtctgtgga
gaggctggcaaggaggacactgtggaggtcgaggaggacaagttcaacgtcatgctgatg
gaatgttccatttgtaacgagatcgtgcaccctggctgcctgaaggtgaaggacgcaggc
ggagtggtgaacgacgagcttcccaactgctgggagtgtccgaaatgcaaccatgccggg
aagacagggaaacaaaagagaggtccagggtttaagtacgcctccaacctgcctggatca
ctgctgaaggagcagagagtgagccgggacaccaaggaggagacggaggctgccgcgcct
gccagaaggaaggtggagtgcgaggagactcccaaacgcaaagcccaagaggagccggcc
aagaaacgagcgcctccaacgccagacgccctgcccaggaggaaaactgatgaggggccg
ctgaggaggaagaggaggcagtttgatgacagcaccgagcccagcatcaggaaaaagagg
agatcttggaagaccccagacgaccgcgcactgattcccaaacctctgcggcagatcaaa
accgagccggaggaggaggaggaagaggaggaggaggaggaggaggaggaggaggaggaa
gaggagcaggagagggaggaggaggaagaggaaggctgctgggagggagggggggatctc
tccgatcgcaccctgaagacgagagagagcgaccagtcccgctccagctctccgcgggcc
gggcccagcagcgagggaggcaacgagccccacgagaagggcaggcttcgggcgcggcgg
aaacgcaggctggccaacaaggaactgagcaaagagctgagcaaggagctcaacctggag
atccagaagacagaggactgcctggcccacgagaactgccaggcgctgaaatcggagccg
gagagcgagagcgaagagcccaagaggaacaatggcagcagcaggagcgcgcggctgcac
aggagtgcccgggagaacgggaacacgagagagctgaggaaccatcgccgactccagcag
ctttccccccccagcacccccgtgtctcctgtgtctgcccgccccccctcctctcactcc
cccccgaagtgcatgcagatggagcgtcatgtgatccggccgccgcccatcagtccgcct
cccgactccctgccgctggaagacggggaggtgcacgtgatgcgcagggaggtgtggatg
ggcgtgttcgggtacctgtcccacaaggagctgtgtgtctgcatgagagtctgcaagacc
tggaatcgatggtgttgtgacaagaggttctggacaaaaatcaatctgaaccggtgcaaa
tcaatcactcctctgatgctcagcggcatcatcaggagacagcctgtgaccctggacctc
agctggacgaatatatcaaaaaaacaattaagctggctcattaatagattaccaggtctg
cgggtgctgctgttatcggggtgctcctgggtggcagtgtctgcactttgcacgtctaac
tgccccttgctgcggaccttggacgtccagtgggtcgaagggttaaaagacactcagatg
agagacctgctctcgcccccaactgacaacagaccaggtcaaatagacaatcggagtaaa
ctgcggaatgttgtagacttgcgtctggcgggattggatattacggacgcttcgcttcgt
cttataatcagacacatgcctttactttccaaactggatctcagttactgtaaccacata
actgaccagtctattaacattctaactgcagtgggtaccaccactcgggattccctaaca
gagattaatctgtcagtttgcaatagggttactgaccagtgcctgacctacttcaaacgc
tgtggaaacatctgtcacgttgacttgcggtactgcaaacaagtgagcaaggaaagctgt
gaacagttcatagcagagatgtctgtaagcgtacagtttggactggtagaggaaaaacta
ctgcaaaaactgagctag

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