KEGG   Acipenser ruthenus (sterlet): 117428465
Entry
117428465         CDS       T07327                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 2B-like
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    117428465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:arut03000]
    117428465
   04121 Ubiquitin system [BR:arut04121]
    117428465
   03036 Chromosome and associated proteins [BR:arut03036]
    117428465
Enzymes [BR:arut01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     117428465
Transcription factors [BR:arut03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    117428465
Ubiquitin system [BR:arut04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     117428465
Chromosome and associated proteins [BR:arut03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117428465
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     117428465
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD F-box JmjC Cupin_8
Other DBs
NCBI-GeneID: 117428465
NCBI-ProteinID: XP_034757906
LinkDB
Position
19:24773909..24818936
AA seq 1281 aa
MEAHAESGRRLRTISRRMYDENEDLSDVEEIANIRSFNLEEKLRSESYNANYVMSMEGKD
FTYGYVQREALRVPLIFKTKDGLGINMPDSDFNVSEVKGLVGSRRAVDVMDVSTQKGTEM
SMAQXVRYYETPEAERDRLFNVISLEFSHTKLENLIKWPIVVDLVDWVDNMWPQHLKEKQ
IEATNAISEMKYPKVQKYCLMSVKGCYTDFHIDFGGTSVWYHIHRGGKVFWLIPPTPHNL
ELYEEWVLSGKQSDVFLGDRVDGCERIELKQGYTFFIPSGWIHAVYTLEDTLVFGGNILH
SFNIPMQLTIYEIENRTKVHAKFRYPFYYEMCWYVLERYVYCLTKRSHLIKDFRRDSMLI
DAERKPSTESFSSDSRLDMDEESGDAPMTEEGLEKSVRSSLDDSCSPETKDKKLKPSGGG
GRHLKRTLSNDSDDSTKSTTPLDFPKTPSGSPVSEASNKWTHLTEFELKGLKALVEKLES
LPENKKCVPEGIEDPQVLLEDMKVVLKEHADDDPKLAITGVPVVCWPKKTVKQRGGGRPK
GKLGASAAVKLAANRASAGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSC
IMRQCIAPVLPHTAVCLVCGEAGKEDTVEVEEDKFNVMLMECSICNEIVHPGCLKVKDAG
GVVNDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPGSLLKEQRVSRDTKEETEAAAP
AKRKVECEETPKRKAQEEPAKKRAPPTPDALPRRKTDEGPLRRKRRQFDDSTEPSIRKKR
RSWKTPDDRALIPKPLRQIKTEPEEEEEEEEEEEEEEEEQAREEEEEGCWEGGGDLSDRT
LKTRESDQSRSSSPRAGPSSEGGNEPHEKGRLRVRRKRRLANKELSKELSKELNLEIQKT
EDCLAHENCQALKSEPESESEEPKRNNGSSRSARLHRSARENGNTRELRNHRRLQQLSPP
STPVSPVSARPPSSHSPPKCMQMERHVIRPPPISPPPDSLPLEDGEVHVMRREVWMGVFG
YLSHKELCVCMRVCKTWNRWCCDKRFWTKINLNRCKSITPLMLSGIIRRQPVTLDLSWTN
ISKKQLSWLINRLPGLRVLLLSGCSWVAVSALCXSNCPLLRTLDVQWVEGLKDTQMRDLL
SPPTDNRPGQIDNRSKLRNVVDLRLAGLDITDASLRLIIRHMPLLSKLDLSYCNHITDQS
INILTAVGTTTRDSLTEINLSVCNRVTDQCLTYFKRCGNICHVDLRYCKQVSKESCEQFI
AEMSVSVQFGLVEEKLLQKLS
NT seq 3846 nt   +upstreamnt  +downstreamnt
atggaggcgcatgcagaatctggacgcagactgcgcaccatcagtaggagaatgtacgac
gaaaacgaagacctctctgatgtggaggagatcgcaaacatccgaagttttaatttggaa
gagaagcttagaagcgaatcgtacaacgccaactacgtgatgtcgatggaaggaaaagat
tttacctatggttacgtgcaaagggaagcactccgggttcctctcatatttaaaaccaaa
gatggactggggataaatatgcctgacagtgactttaacgtcagtgaagttaaaggacta
gtaggaagccgtcgagcggtggacgtgatggacgtcagcacccagaaggggacggagatg
agcatggcgcagnttgtcagatattacgagacccccgaggctgagagagaccggctcttc
aatgtcatcagcctggagttcagccacactaaactggagaacctgatcaagtggcccatt
gtggttgatttggtcgactgggtggacaatatgtggccacagcacttaaaggagaaacag
attgaagccactaatgccatttcagagatgaagtaccccaaagttcaaaagtactgcttg
atgagtgtgaagggctgctacactgactttcacattgatttcgggggcacatctgtgtgg
taccacattcacaggggagggaaggtgttctggttaattcctccaacgcctcataatttg
gagctgtacgaggagtgggtcctgtccgggaagcagagcgatgtgtttctgggagaccga
gtcgatgggtgcgagaggattgaactgaagcaaggatacacgttcttcatcccatcagga
tggatccatgcagtctacactctggaggacactttggtgtttggaggcaacattctgcat
agctttaacattcccatgcagctgaccatctatgagatcgaaaacaggacaaaggttcat
gccaaattccgctaccctttctactatgagatgtgctggtatgtcttggagagatacgtg
tactgcttgactaaacgctctcatctcatcaaggacttccggagggattcaatgctaatt
gatgcagagaggaaaccgagcacagagagcttctcttcggattctcgactagacatggac
gaggagtcgggcgacgccccgatgacagaagaggggctggagaagagcgtccggtcctcg
ctggacgactcctgctccccagagaccaaagacaagaaactcaaaccctcgggtggcggt
ggccgccacttgaaacggactctgtcaaacgactcggacgacagcaccaagtcgaccacg
ccgctggactttcccaagactccgtcgggatcccccgtttcagaagcgtcaaacaagtgg
acccacctgacggagttcgagctcaaagggctgaaagcgctggtggagaagctggagtcc
ctgccggagaacaagaagtgtgtccctgaggggatcgaggacccgcaggtgctgctggag
gacatgaaggttgttctgaaggagcacgcagatgacgaccccaagctggctattacgggg
gtgcctgtggtgtgctggcccaagaagacagtgaagcagaggggcggggggaggccgaag
gggaagctgggtgcctctgcggcggtcaagctggctgcaaacagagcctctgcgggggcg
cggcggaggaggacgcgatgccgcaagtgtgaggcctgcctgcggaccgagtgcggggag
tgccacttctgcaaggacatgaagaagttcgggggtccgggcaggatgaagcagtcctgc
atcatgaggcagtgcatcgcgcctgtgctcccccacaccgccgtgtgtctggtctgtgga
gaggctggcaaggaggacactgtggaggtcgaggaggacaagttcaacgtcatgctgatg
gaatgttccatttgtaacgagatcgtgcaccctggctgcctgaaggtgaaggacgcaggc
ggagtggtgaacgacgagcttcccaactgctgggagtgtccgaaatgcaaccatgccggg
aagacagggaaacaaaagagaggtccagggtttaagtacgcctccaacctgcctggatca
ctgctgaaggagcagagagtgagccgggacaccaaggaggagacggaggctgccgcgcct
gccaaaaggaaggtggagtgcgaggagactcccaaacgcaaagcccaagaggagccggcc
aagaaacgagcgcctccaacgccagacgccctgcccaggaggaaaacggatgaggggccg
ctgaggaggaagaggaggcagtttgatgacagcaccgagcccagcatcaggaaaaagagg
agatcttggaagaccccagatgaccgcgcgctgatccccaaacctctgcggcagatcaaa
accgagccggaggaggaggaggaagaagaggaggaggaggaggaggaggaagaagagcag
gcgagggaggaggaagaggaaggctgctgggagggagggggggatctctccgatcgcacc
ctgaagacgagagagagcgaccagtcccgctccagctctccgcgggccgggcccagcagc
gagggaggcaacgagccccacgagaagggcaggcttcgggtgcggcggaaacgcaggctg
gccaacaaggaactgagcaaagagctgagcaaggagctcaacctggagatccagaagaca
gaggactgcctggcccacgagaactgccaggcgctgaaatcggagccggagagcgagagt
gaagagcccaagaggaataatggcagcagcaggagcgcgcggctgcacaggagcgcccgg
gagaacgggaacacgagggagctgaggaaccatcgccgactccagcagctctccccaccc
agcacccccgtgtctcccgtgtctgcccgccccccctcctctcactcacccccgaagtgc
atgcagatggagcgtcacgtgatccgaccgccgcccatcagcccgcctcctgactccctg
ccgctggaagacggggaggtgcacgtgatgcgcagggaggtgtggatgggtgtgttcggg
tacctgtcccacaaggagctgtgtgtctgcatgagagtctgcaagacctggaatcgatgg
tgttgtgacaagaggttctggacaaaaatcaatctgaaccggtgcaaatcaatcactcct
ctgatgctcagcggcatcatcaggagacagcctgtgaccctggacctcagctggacgaat
atatcaaaaaaacaattaagctggctcattaatagattaccaggtctgcgggtgctgctg
ttatcggggtgctcctgggtggcagtgtccgcactttgcnnatctaactgccccttgctg
cggaccttggacgtccagtgggtcgaagggttaaaagacactcagatgagagacctactc
tcgcccccaactgacaacagaccaggtcaaatagacaatcggagtaaactgcggaatgtt
gtagacttgcgtctggcgggattggatattacggacgcttcgcttcgtcttataatcaga
cacatgcctttactttccaaactggatctcagttactgtaaccacataactgaccagtct
attaacattctaactgcagtgggtaccaccactcgggattccctaacagagattaatctg
tcagtttgcaatagggttactgaccagtgcctgacctacttcaaacgctgtggaaacatc
tgtcacgttgacttgcggtactgcaaacaagtgagcaaggaaagctgtgaacagttcata
gcagagatgtctgtaagcgtacagtttggactggtagaggaaaaactactgcaaaaactg
agctag

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