Acipenser ruthenus (sterlet): 117430198
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Entry
117430198 CDS
T07327
Name
(RefSeq) short transient receptor potential channel 5-like isoform X1
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
arut01009
]
117430198
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117430198
Protein phosphatases and associated proteins [BR:
arut01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117430198
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117430198
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
117430198
NCBI-ProteinID:
XP_033905898
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All DBs
Position
20:12963054..13046599
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AA seq
977 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAEAELSTQEKAYLIAVEKGDYASVKQALEEAEIYYN
ININCMDPLGRSALLIAIENENLEIMELQLSHNIYVGDALLYAIRKEVVGAVELLLSHRK
PSGEKQVSSLMMDNQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTCFRLGWELKELSKVENEFKAE
YEELSQQCKRFAKDLLDQARSSRELEIILNHRDDQSEELDPHECHDLAKLKLAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRRHWAVKLLTCFTIGLLFPVFSVVYLLAPKSSLGLFI
KKPFIKFICHTASYLTFLFLLLLASQHIVRTDLHMQGPPPTIVEWMILPWVLGFIWAEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETSAAEEPHNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIVSPKSIWYLCMWLHRQLCPGKSRDEEHKKHENFKTFTERHADILIQNQHYQEVIRN
LVKRYVASMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRKPPRRTYSSSSDATL
KDEMNDEGEGKCKSKNVSFNQADKKRDAFSVSALFRSMSGIDIAEEKPKSNGLKKSFVKN
GNRLQRISSSKKDSFKRMGLLFSKMNGHVSEPSSSEPMYTISDGLIQPKHMWQDFKYSRS
EVHLNAVGMDEPAKVNGMDGLLPPVCGNSLHCASSITASSSKLINSTEDVFDGWEAGCSV
LINNWKAGQEDSVTTQL
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagctctactacaagaaggtgaactactctccttaccgggaccgcatcccactg
cagatcgtccgggcagaggccgagctctctacccaggagaaggcctacctgattgcggtg
gagaagggggactacgccagcgtgaagcaggccctagaggaggcagagatctactacaac
atcaacatcaactgcatggaccccctggggcgcagcgccctgctcatcgccatcgagaac
gagaacctggagatcatggagctgcagctgagccacaacatctacgtgggggacgcgctg
ctctacgccatccgcaaagaggtggtgggggccgtggaactgctgctgagccaccgcaaa
cccagtggggagaagcaggtctcttccttaatgatggataaccagttttcagagttcact
cccgacatcacccctatcatgctggcagcccataccaacaactatgagatcatcaaactc
ctggtccaacgcaaggtcaccatcccgcggccgcaccagatccgctgcaactgcgtggaa
tgcgtgtcgagctccgaggtggacagcctgcgtcactcccgctcccgcctcaacatctac
aaggctctggccagcccctccctcatcgccctgtccagcgaggaccccatcctcacctgc
ttccggctgggctgggagctcaaggagctgagcaaggtggagaacgagttcaaggcggag
tacgaggagctttcccagcagtgcaagcgctttgccaaggatctcctggaccaggcccgc
agctcccgggagctggagatcatcctgaaccatcgggatgaccagagcgaggagctggac
ccgcacgagtgccacgacctggccaagctcaagctggccatcaaataccaccagaaagag
tttgtggctcagccgaactgccagcagctcctggcgactctgtggtacgacgggttccct
ggctggcgccggcggcactgggctgtcaagctgctgacctgcttcaccatcgggctgctc
ttcccggtcttctcggtggtttacctgttagctcccaagagcagcctgggcctgttcatc
aagaagccgttcatcaagttcatctgccacaccgcctcctacctgacattcctgttcctg
ctgctcctcgcctcccagcacatcgtccgcacagacctgcacatgcagggccctccaccc
accatcgtcgagtggatgatactgccctgggtgctgggattcatttgggctgaaattaaa
gaaatgtgggacggggggttcaccgagtatatccatgactggtggaacctgatggatttc
gcaatgaactccctgtatctcgccaccatctcattaaagattgttgcatatgtcaagtac
aatggctctcgtccccgggaggagtgggagatgtggcaccccaccctaatcgcagaggcc
ctgtttgccattgccaacatcttcagttccctgcggctcatctccctgttcactgccaac
tcccacctggggcccctgcagatctcgctgggccgcatgctgctggacatcctcaagttc
ctcttcatctactgcctggtgctgcttgccttcgccaatggcctgaaccagctgtacttc
tactatgagaccagcgctgcagaggagccccataactgcaagggcatccgctgtgagaaa
cagaacaatgccttctcaacgctatttgagaccctgcagtccctgttctggtctgtgttt
ggtttgctgaatctctacgtcaccaatgtgaaagcccgacatgagttcacggaatttgtt
ggcgccaccatgtttggcacgtacaatgtgatctctctcgtggtgctgctcaacatgctg
atagccatgatgaacaactcctaccagctcattgcagaccacgccgatatcgagtggaag
tttgcccggacgaagctgtggatgagctattttgatgaggggggcaccctgccgcccccc
ttcaacatcatcgtgagccccaagtccatctggtacctgtgcatgtggctccaccggcag
ctctgccctgggaagagccgtgacgaggagcacaagaaacatgagaacttcaagacattc
acggaacgccatgctgacatcctcatccagaaccaacactaccaggaagtcataagaaat
ttggtgaaacgatatgtagcctccatgataaggagtgccaagacagacgagggtctaacg
gaggagaatttcaaggagctgaagcaggacatttccagtttccgctatgaagttctcgac
ctgctgggtaacaggaagcccccgcggcggacctactcctccagcagcgatgccaccctg
aaagacgagatgaacgacgagggtgagggcaagtgcaaatccaagaatgtctccttcaac
caggccgacaaaaagagagacgccttcagcgtgtcggctctgttccgctccatgtcggga
atcgacatcgcggaggagaaaccaaagagcaacggcctcaagaagtccttcgtcaagaac
ggcaaccgactgcagagaatctctagctccaaaaaggactctttcaagagaatgggcctg
ctgttctccaagatgaacgggcatgtttcggagcccagctcctcagaacccatgtacacc
atctcggacgggcttattcagcccaagcacatgtggcaggacttcaagtactctcggagc
gaggttcacctcaatgcggttggcatggacgagccggccaaggtcaacggcatggacggt
ctcctgcctcccgtctgtggcaactcccttcactgtgcttccagcatcaccgcttccagc
tccaagctcatcaactctacagaggacgtgtttgatggctgggaggcgggttgcagtgtg
ctcattaacaattggaaagcagggcaagaggacagcgttaccacccagttatga
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