Acipenser ruthenus (sterlet): 117430831
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Entry
117430831 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase XIAP-like
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04120
Ubiquitin mediated proteolysis
arut04210
Apoptosis
arut04217
Necroptosis
arut04510
Focal adhesion
arut04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117430831
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117430831
04217 Necroptosis
117430831
09144 Cellular community - eukaryotes
04510 Focal adhesion
117430831
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117430831
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
arut01002
]
117430831
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117430831
03029 Mitochondrial biogenesis [BR:
arut03029
]
117430831
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117430831
Peptidases and inhibitors [BR:
arut01002
]
Peptidase inhibitors
Family I32: IAP family
117430831
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117430831
Mitochondrial biogenesis [BR:
arut03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117430831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
UBA_BIRC2-3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
117430831
NCBI-ProteinID:
XP_033907228
LinkDB
All DBs
Position
20:complement(1913688..1923261)
Genome browser
AA seq
465 aa
AA seq
DB search
MAYSQSDNDLESDNCGDMSEIHTRLQSFHNFPKDNLVSHQRLARAGFFFTGNSDRXRCFS
CNHTVENWSSGDAPVERHQQVSPCCTYLSCTQRVPSQPATLNGHAAPSTNSAAYDEERED
LEYRLRTGEVVDETDYPKHPDMCREEARLDTFQSWPPSAPVRPRELAQAGFYYTNSRDRV
ECFCCGGMLGNWEPGDEAWMEHERHFSNCFFILGHEVGNIPCQQPPEMDTVPYMGSYEER
LRSFTGQQHPVDPERLARAGFYSTGELDKVMCFQCAGGLKGWQADEDPWEEHAKYYPGCN
FLIAEKGQAFVNSIQLGNPCRNSAVSAERVPNGLAVRQEDSGIMQSSVVQRALEMGFDAA
EVERTARERVCKTGMEYDSVEALISDLTRAESESEETQDKEEEDPMEKLRKLQQEKLCKV
CMDKNIAIVFIPCGHLVTCKKCSEVLSKCPICCAPIIQKVKTYLS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcttattcccagtctgacaacgaccttgaatcggacaactgtggggacatgtctgaa
atccacacacggctccagtcattccataacttccccaaggataacctggtatctcatcag
aggctggccagagctggctttttcttcacaggcaactccgaccggntcaggtgcttcagc
tgcaatcacactgtggagaactggagcagtggagacgcccctgtagagaggcatcaacag
gtgtccccttgctgcacctacctgagctgcacgcagagagtcccctcccagccagccacg
ctcaacggacacgcggccccatcaaccaacagtgctgcgtacgacgaggaaagagaggat
ctggagtaccgcctgcgaacgggagaggttgtggacgagactgactatccgaaacaccct
gacatgtgcagagaggaagccaggctggacaccttccaatcgtggcccccgtctgcccct
gtgaggccccgggagctggcccaggccgggttctattacaccaactccagggaccgggtc
gagtgcttctgctgtggtggcatgctggggaactgggagcctggagatgaagcctggatg
gagcacgagaggcacttcagcaactgcttcttcatcctgggccacgaagtggggaacatt
ccttgccagcagccccctgaaatggatacagttccgtacatgggatcctatgaggagcgt
ctccgcagcttcactggccagcagcatcccgtcgacccagagaggctggcgagggctggg
ttttacagtacaggtgagctggacaaggtgatgtgtttccaatgtgcagggggtctgaag
ggctggcaggctgatgaggacccctgggaggaacatgccaaatactatccagggtgtaac
tttcttattgcggagaaaggccaagcgtttgtgaacagtatccagttgggaaatccctgc
aggaactctgctgtaagtgcagaacgtgttccaaatggactggcagtacgacaagaagat
tcgggcatcatgcagtcctctgtagtgcagagggctctggagatgggcttcgatgctgca
gaagttgagagaacagcccgggagagggtttgtaagactgggatggagtatgattcagtg
gaagctctgatcagtgacctgaccagggctgaaagtgagtcagaggaaacacaagataaa
gaggaggaggaccctatggagaagctgaggaaactacagcaggagaagctctgtaaagtc
tgcatggacaaaaacattgccatagtcttcatcccctgtggacacctggtcacctgcaag
aagtgttccgaggtccttagtaaatgccccatatgctgcgcacctatcattcagaaggtt
aaaacctacctctcgtga
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