Acipenser ruthenus (sterlet): 117430915
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Entry
117430915 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: telomerase-binding protein EST1A-like
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117430915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117430915
03032 DNA replication proteins [BR:
arut03032
]
117430915
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
117430915
mRNA cycle factors
Common to processing body (P body) and stress granule
117430915
DNA replication proteins [BR:
arut03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
117430915
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
117430915
NCBI-ProteinID:
XP_034759176
LinkDB
All DBs
Position
20:23417487..23482185
Genome browser
AA seq
1594 aa
AA seq
DB search
MEMKMAEELERVRISAAELRGAAPGTSRDQSLRAGEPPDSGKDQCDGQQRRDGKRPDLRL
YQPGMSRLRPRRETSGSSEGDGRPEHCPREEEEEEEEERGTGPEAAHAAETTGTARTPEI
PARDSPASVAAAAAPAGSPKQARKTRKPDRQIYQPGGRRLQQPARPSKETGVSKDLTVSK
ETSKETGVSKDLTVSKETSKETGVSKDLTVSKETSKETGVSKDLTVSKETSKETGVSKDL
TVSKETSKETGVSKDLTVSKETSKETGVSKDLTLSKETGVSKDLTLSKETGVSKEPAADK
ETTDNKNPGVSKAGGAAKDSAETLIRKTEGMNISEGVSRPAFGEEGEGGRKKAGSEGRRN
KAGGEGAQGRKEKGGGGVSSKRYSKSDKRRNRTYSTSSASSGTSFDGPGNGGGSARVGES
RRKQHQQQGARDRGGRVSGTSRSAVTAGGGDRRERARAPKKQASISSTDSYDDFEQEDRE
EREGEGWSPDRSSNNRRRGGGSSSSSDRRAGGILRVSFDRESNSLVTTANSAEQKRRDEP
RGRGRGILILPAHTDLTAPPESGSRLLVGSRGARGQGRGGATRRLWDPNNPEQKPALLKG
QQQQQQQHLGLQQHLHLQQAVYSQPQLHFLDTDDETTGSPPAHQXEAFQGYRAAAQQAVA
SCYYKFQNSDNPYYYQPTTAPRYPYPYQLPYQIQGTNGVCPPAAPGYYAGYPGVGAAPSS
LQQHGYISSPLTPEEAELQAKGMQQQELIKLLRIADKQELQLSNLLSRDRLSPEGLDRMA
QLRAELLSVYERVILSDLEYSDTHNLDQALWKNAFYQVIEKFRQMLKDPASETGHQIRAM
LLTLLDEGAAFFDSLLMKLQAVFQFKLEDYMDGMAIRSRPLRKTVKYALISAQRCMICQG
DIARYREQANDTANYGKARSWYLKAQQIAPKNGRPYNQLALLAIYTKRKLDAVYYYMRSL
AASNPILTAKESLMSLFEETKRKADQMERRRQQQQQREREEVSECSAGPRGRGGAGGGGR
STLGDDAARVEIWVRPARKGQSRAGSESGKESEQDSELSHLIPSDLNKRFILSFLYAHGK
LFTKIGMETFPVVAARVLQEFRALLQHSPSLIGNTRMLQLITINMFAVHNAQSRDGGSEA
RSVIQDQATSLGLSVFALLVERCTELLKDTPRAPPSASEDDDGDEEEDVKVSSFHADLRE
LLPSVKVWSDWMLGQPDQWNPPPSLLFPNGCCLDVWQTLAQFCNTLAGVNQGAVPLYKDP
DEDLRLLVLEEDRLLSGFIPLLGAPQEPCYVETASDKAIAADCKRVTVLKYFLEALCGQE
EPLLAFKGGKYVSMATVPDTMGKETGSQEGKQADNQDEDVLVEAMEEDSESDASGSEDDF
RELRARKHALTVKVAEQQRRRDKIQAVLQPCRQLEIEITPVFLVPDTNGFIDHLNGLAKL
LSCKAYILVVPLIVITELDGLARGQETEYRTGSHARQVQEHARSAISFLERGFENREPCL
RALTSRGNELESISFRSEDPTGQQGNNDDLILSCCLHYCKDKAKDFMPTQKDEPIRLRRE
VVLLTDDRNLRVKALTRNVPVRDIPAFLKWAKVG
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaagatggcggaggaactagagagggtccgaatttcagccgcggaactacgg
ggcgccgctcccgggactagccgggaccagagcctgcgagccggggagccgccagacagc
ggaaaggaccagtgtgacggtcagcagcgccgggatgggaagcggccggacctgcggctc
taccagcccggcatgtcgaggctccgaccccgcagagagacctcagggagtagcgagggg
gacgggcggccggagcactgcccacgagaggaggaggaggaggaggaggaggagcggggg
acagggccagaggcagcccacgctgctgaaaccacggggaccgcaaggacccccgaaata
ccagctcgggacagcccagcctccgtcgctgctgctgctgctcctgcggggtccccaaaa
caggcacgcaaaacccgcaaaccggaccggcagatctaccagcccgggggccgccgtctg
cagcagccagcgcgtccgagcaaagagactggggttagcaaagacctgaccgtgagcaag
gagactagcaaagagactggggttagcaaagacctgaccgtgagcaaggagactagcaaa
gagacgggggttagcaaagacctgaccgtgagcaaggagaccagcaaagagactggggtt
agcaaagacctgaccgtgagcaaggagactagcaaagagactggggttagcaaagacctg
accgtgagcaaggagactagcaaagagactggggttagcaaagacctgaccgtgagcaag
gagactagcaaagagacgggggttagcaaagacctgaccttgagcaaggagactggggtt
agcaaagacctgaccttgagcaaggagactggggttagcaaagaacctgcagccgacaag
gaaactactgacaacaaaaatccaggggttagcaaggcgggaggggctgccaaggactct
gcagagaccttaatcaggaaaacagaggggatgaacatttccgagggtgtcagtcgtcca
gccttcggggaggagggcgagggagggagaaagaaggcggggagcgagggcaggagaaac
aaagcagggggagagggagctcaagggaggaaagagaaggggggcggtggtgtctcatcg
aagcgctactccaaatcagacaagcgccgcaatcggacctacagtaccagctcggccagc
agcggtaccagtttcgatgggcctgggaacggaggggggtctgcgagagtcggggagagc
aggagaaagcagcaccagcagcagggagccagggacagaggagggagggttagtggaaca
tcccgttctgccgttacagctgggggaggcgacaggagagagagggcccgggctcccaaa
aaacaggccagcatttcatccacggactcttacgatgacttcgaacaagaggacagagag
gagagagagggtgaagggtggagcccagataggtctagtaataacagaaggagaggggga
ggaagcagcagcagcagcgatagaagggcaggcggcatcttaagggtgagcttcgacagg
gaaagtaattctctggtcaccaccgcgaacagcgcggagcagaagaggagagacgagccc
agagggagagggaggggcatcctcatactccccgcccacacagacctgactgcaccccct
gagtcggggtcacgcctcctggttggaagccggggagccaggggacagggccggggcggg
gctaccagaaggctgtgggatcccaacaatccagagcagaagccagctttattaaagggc
cagcagcagcagcagcagcagcaccttggcctacagcagcacctacacttgcagcaagca
gtatactcccagcctcagcttcacttcttagacacagatgacgaaaccacaggcagcccc
cctgcccaccagnaggaagcctttcaaggctaccgcgccgccgctcaacaggcagtcgct
tcttgttactacaagtttcagaactcggacaacccttactattaccagcccaccaccgcc
ccccggtacccctacccttaccagctaccctatcagatccaaggcactaatggggtgtgc
ccccctgctgctcctggctactacgcagggtaccctggtgtcggagcggccccttcctct
ctgcagcagcacggatacatctccagccccctcaccccggaggaggctgagctccaggcc
aaggggatgcagcagcaggagctgatcaagctgctccggatagcagacaagcaggagctg
cagctcagcaacctgctgtcccgggaccggctcagcccagaggggctcgacaggatggca
cagctcagggctgagcttctctctgtgtacgagcgtgtgatcctgagcgatctcgagtat
tcggacactcataatctagaccaggctctgtggaagaacgctttctaccaggtgatagag
aagttcaggcagatgctgaaagacccagcctcggagaccggccatcagatcagagccatg
ctgctcacactgcttgacgagggagctgcgttcttcgactccctcctgatgaagctgcag
gccgtgttccagttcaagctggaggattacatggatgggatggcgattcgcagccgaccc
ctgcgcaagacggtgaagtacgcgctgatcagtgcccagaggtgcatgatctgccaggga
gacattgccaggtaccgagagcaggccaacgacacagccaactacgggaaagcacgcagc
tggtacctgaaggcgcagcagatcgctcccaaaaacggacgcccgtacaaccagcttgca
ctgctggctatctacacgaagcggaagctggatgcagtgtattactacatgcgcagcctg
gctgccagtaaccccatcctgactgccaaagagagcctgatgagtctgttcgaggagacc
aagcgcaaggcggaccagatggagcggcgcaggcagcagcagcagcagcgagagcgggag
gaagtctccgagtgcagtgcagggcccaggggccgggggggagcaggagggggaggcagg
tccactctcggggacgacgcggctcgagtggagatctgggttcgaccggccaggaaaggc
cagtccagagcgggcagcgagtccggcaaagagtctgagcaagacagtgagctgagccac
ctcatccccagtgacctcaataagcgtttcatcctgagtttcctctacgctcacgggaag
ctcttcacaaagatcgggatggagacgttcccagtggtggcggctcgggtccttcaggag
ttccgcgccctcctgcagcacagcccctccctcatcgggaacacgcgcatgctgcagctc
atcaccatcaacatgttcgcagtgcacaacgcgcagagcagggacgggggcagtgaggct
cgctcagtgatccaggatcaggctacctctctggggctgtcagtgttcgccctgctggtg
gaacgctgcacggagctgctcaaggacactccgagagcaccccccagtgccagcgaggat
gatgacggggatgaagaggaagacgtcaaggtgtcttccttccacgcggacctcagggag
ctgctgcccagcgtcaaggtctggtcggattggatgctaggccaaccggaccagtggaac
ccgcctcccagcctgctctttccaaacgggtgctgcctggatgtgtggcagaccctggcg
cagttctgtaacacgctggcgggggtgaaccagggcgcggtgccactctacaaagaccca
gacgaggacctgcgtctgctggtgctggaggaggaccggctgctctcaggcttcatcccc
ctgctgggggcgccgcaggagccctgctatgtggagacagcgtccgacaaggccatcgct
gcggactgtaagcgggtcacggtgctcaagtatttcctggaagcgctctgtggacaagaa
gagcctctgctggcattcaagggtggaaaatatgtgtcgatggcaaccgtcccagacacc
atgggaaaggaaacgggaagccaggagggaaaacaagccgacaatcaggatgaggatgtg
ctggttgaagcgatggaggaggactctgagtcggacgccagcggcagcgaggatgatttc
cgagagctgagagcacgcaagcatgccctgactgtgaaagtggcggagcagcagaggaga
cgagacaagatccaggcagtgctgcagccctgcaggcagctggagattgagatcactccc
gtgttcctggtccccgacaccaacggcttcattgaccacctgaacggtctggccaagctg
ctgagctgcaaggcttacatactggtggtgcccctcatcgtgatcacggagctggacggg
ctggcacgggggcaggagacggagtaccgcactggcagccacgcccggcaggttcaggag
cacgcccgcagtgccatcagcttcctggagcgcgggttcgagaacagagagccctgcctg
agagctctgaccagccgggggaatgagctggagtccatctccttccgcagcgaggaccct
acgggacagcagggaaacaacgatgacctcatcctgtcctgctgcctgcactactgcaaa
gacaaagccaaggacttcatgcccactcagaaagacgagcccattcgtctgcgcagggag
gtggttctgctgacggacgaccggaacctgcgagtgaaagcgctgacccgaaacgtgcct
gtccgggacatcccagccttcctcaagtgggccaaagtgggatga
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integrated database retrieval system
