Acipenser ruthenus (sterlet): 117431977
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Entry
117431977 CDS
T07327
Symbol
agrn
Name
(RefSeq) LOW QUALITY PROTEIN: agrin
KO
K06254
agrin
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04512
ECM-receptor interaction
arut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117431977 (agrn)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117431977 (agrn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
arut00535
]
117431977 (agrn)
Proteoglycans [BR:
arut00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
117431977 (agrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Kazal_2
Kazal_1
NtA
EGF
EGF_laminin
SEA
Kazal_CFAI
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
117431977
NCBI-ProteinID:
XP_034760649
LinkDB
All DBs
Position
23:4486720..4648008
Genome browser
AA seq
2092 aa
AA seq
DB search
MGTKWRRIADFSCWTLILVAVLFKRCHGSCAEKELESREEEASVVLTGTVEEIMNMDPVH
NTYSCKVRVWRYLKGKTTVTNEILLDGGNKVMIGGFGDPGICDNQVSTGDTRIFFVNQAP
EYMWPAHKNELMLSSSLMRITLRNLEQVEHCVEDHRMHIADKPVHFTAPQPADVCRGMLC
GFGAVCEKDVADPSKGACVCKKVSCPSVVAPVCGSDYSTYSNECELEKAQCSTQRRLKVI
KKGPCATKNPCSEVTCSYGSTCIQSSDGLSAKCMCPISCTKQPEKVVCGSDGKDYRNECE
MNEFACDHQKNINKQFDGPCDPCKDNQNNRDEGCRVIPRSRQIVRFPLPENCPPIKEPLC
GSDGTTYPNECSMLRTASQKGIQLFKVRSDSCQPQDKCKEECKYNAVCLNRKPAPRCSCE
PIECDGTYKPVCGRDSKTYSNDCQRQKAECIQKTHIPVKHEGPCDLSAPSPCHKKTCEFG
ATCVVENGKPVCECLSVCPQVQDLVCGDDHHTYSSLCEKNKLKHGPCGEXLCGKCQFGAI
CESETGRCVCPTECVASNQPVCGTDGNTYQNECELHVRACTQQQSIEVAGQGECKTCGTV
TCAFGAQCMNNRCVCPRCDKQSFAPVCGSDSITYDNPCEMQAASCQLKKKIEVSQSGSCD
EECGSGGSGSGEDSVCEQERCKRFGGSWDEDTEDDRCVCDFSCDNVPRNPVCGSDGKTHS
NECELKKTRCEEQDDVQVMNQGPCEAVPAPLAPTAMSQHCSQTVYGCCLDNTTAALGVGL
AGCPSTCLCNQYGSYGGTCDPSSGQCSCKPGLGGQKCDRCEPGFWNFRGIVTENKSGCTP
CNCDVTGSVRDDCEQMSGLCSCKTGVIGMKCNQCPDGREMGVNGCDKGPSAVASCTGVQC
EFGASCVEVNGNAFCECPSSDCDEKNKTKVCGSDGVTYGDQCQLKTIACRQSMKITIKHT
GQCRENIPHGSIAVPTSTPSTPTTRAKRPTTTLSDPIEEEEEEEEEDAVTASQVLVEALP
VLTTSASRLTTRPPSTTKSPSRSTKPPLPTPRDAPTARPTTSSPTVTPSPSTLSFEDSGS
GEPSGEPSGDDDLEASGAAETSGDEPIGKPAVPKPTVRPTTTASPAERSPCDNTAFGCCP
DSKTAATDTEGANCPPTKEFHAVLILEEVEGQEVFYTPEMADPKSELFGETARSIESALN
ELLRKSDVEKDFKSVRVRDLGPSGSIRATVEAHFDPATTYTSQDVQKALLKQLKMSKKKA
IAVKKPEEEHIRVLDFDWVPNPFATTTTTTTAATTVPPTTTTITTTTARLLSSTRRRPAT
TARTTRRPSTARRATTPAPTTTTPTPTTPGKVFFPPRQTPCDSHPCRHGGTCEDDGQDFT
CICPAGRGGSVCEKAIKYYIPAFGGKSYLAFKTIKAYHTVRISMEFRASELSGLLLYDGQ
NRGKDFISLALINGFVELRFNTGSGTGIITSKIRIEPGKWHQVLVNRNRRNGMLSVDGEP
HVNGESPAGTDGLNLDTDLFIGGAPEDQMAVVQERTSAASGLVGCIRMLDVNNLVYKLQE
KEGDVLYGTGVGECGNNPCHPNPCKNGARCQVKEAEMFHCQCINGFSGPTCADEHNPCDP
NKCHSSATCLVLPEGGYKCECPMGREGKHCEKEMHDQTKAFIPEFKGDSYMELNGLHAFG
IDLMQKLSITVVFLAKDLTGLIFYNGQKTDGKGDFISLALNDGTLEFRYDLGKGPAVIRT
KNKIQLDVWNVVTLERNGRKGVITVNNGEAERGESPKSRKDQHTALNLKQSLFVGGAPDF
STLARAASVNNGFTGAIQKISLMGIVVLKKDYVLKAVDVSVYRAHPCSKSPSVCHNAGIC
HPKLDSYECVCQHGFSGTRCENAIVEKSAGETEAIAFDGRTFMEYHNAVTKSQVTNEIPD
PESVDDPLDQSEKALQVNSFELSIKTEATQGLILWSGKGVERSDYIALAIVDGHVQMAYD
LGSKPVVLRSTIPVNTNKWIKIKASREQRDGTLQVGNEAPVTGSSPLAATQLDTDGALWL
GGLERLSVAHKLHKAYSTGFMGCMKEVIVDSQELHLVEDALNNPKILHCSSK
NT seq
6279 nt
NT seq
+upstream
nt +downstream
nt
atgggcacaaagtggagacggattgcagacttttcctgttggactttaatattggtcgcg
gttttgttcaaacgctgtcatggaagttgtgcggaaaaagagttggaaagcagggaagaa
gaagccagtgttgttttaactggaactgttgaagaaatcatgaacatggatccagtgcac
aatacttactcttgcaaggtgagagtctggcgctatctaaaaggcaaaacaacggtgacc
aatgaaattctcctggacggcgggaataaagtcatgattggaggattcggggaccctggg
atctgtgacaatcaggtgtctaccggcgacacgcggattttctttgtcaaccaggctcct
gaatatatgtggcctgctcacaagaatgagctgatgctgagctccagcctgatgaggatt
actctgaggaacctggagcaggtggagcactgcgtggaagatcacaggatgcatattgct
gataaaccagttcactttacagcaccccagccagcagatgtgtgtcgagggatgctgtgt
gggtttggagcggtctgtgagaaggacgtggctgatccatccaaaggagcgtgtgtctgt
aagaaagtgtcttgcccgtccgtggtggccccggtgtgtggatctgattactccacctat
tccaatgagtgcgagctggagaaagcacagtgcagcacacagaggaggctcaaggtgatc
aagaagggaccgtgtgctacaaagaacccttgttccgaagtgacctgcagttatggcagc
acctgcatccagtcttctgacggcctgtctgccaagtgtatgtgcccgatctcctgtacc
aagcagccagagaaggtggtgtgtggcagtgatggcaaggactacaggaatgagtgtgag
atgaacgagttcgcctgcgaccaccagaagaacatcaacaagcagtttgatggcccgtgt
gacccctgtaaagataaccagaacaaccgggatgagggttgccgtgtgattcccaggagc
cggcagattgtgaggttccctttgccagagaactgcccccccataaaagagccactgtgt
ggcagcgacgggaccacctatccaaatgagtgcagcatgctgcgcactgccagtcaaaag
ggcatacagcttttcaaagtccgttctgactcctgccagcctcaggacaagtgcaaggag
gaatgtaaatacaacgctgtatgccttaaccgcaaacctgcgccccgctgctcctgtgag
cccattgagtgtgacggcacctacaaacccgtctgcggtcgagacagcaagacctacagc
aacgactgccagcgccaaaaggcagagtgcatccagaaaacccacattccagtgaaacac
gaggggccttgcgatctcagtgccccaagcccctgccataaaaagacctgtgagtttggt
gccacctgcgtggtggagaacggcaagccggtatgcgagtgcttgagtgtgtgccctcag
gttcaggacctggtctgcggagatgaccaccacacctacagcagcctttgtgaaaaaaat
aaactcaagcacggaccatgcggtgagtaactctgcggcaagtgccagttcggggctatc
tgtgagtctgagactggcaggtgtgtgtgcccgactgagtgtgtggcttccaaccagcct
gtgtgtggcactgacggcaacacctaccagaacgagtgtgagctgcatgtgcgagcttgt
acccagcaacagagcattgaagtggccgggcagggagagtgcaagacctgcggtacagta
acctgcgccttcggtgcccagtgcatgaacaatcgctgcgtgtgtccccgctgtgataag
cagtccttcgccccagtctgtggcagcgacagcatcacctacgacaacccctgcgagatg
caagccgcctcctgccagctcaagaagaaaattgaagtctcccagtctggaagctgtgat
gaagaatgtggctctggtggttctggctcaggagaggacagtgtgtgcgagcaggagcga
tgcaagaggttcggaggctcctgggatgaagacactgaggacgaccgctgtgtctgcgat
ttctcctgtgacaacgtcccccgaaacccggtctgtggaagtgatggaaagacacacagc
aatgagtgtgagctgaagaagacacgctgtgaagaacaagacgatgttcaagtcatgaac
caggggccctgcgaggctgttcctgcacctttagcccccacagcgatgagccagcactgc
agccaaacagtttatggctgttgccttgacaacacgactgctgcccttggagttggcctg
gcaggctgccccagtacctgtctgtgtaatcagtatgggtcgtatgggggtacctgtgac
cccagctctggtcagtgctcttgtaaaccaggactgggtggacagaagtgtgaccgctgt
gaaccaggattctggaatttccggggaatcgtcacggaaaacaagagcggctgcaccccc
tgtaactgtgatgtcactggctcagtccgagacgactgtgaacagatgtccggactgtgc
tcctgcaagacaggggtgattggcatgaaatgcaaccagtgtccagacggcagagaaatg
ggagtgaacggctgcgacaaaggtccctctgctgtcgcatcgtgcaccggggtgcagtgt
gagttcggtgcttcctgcgtggaggttaatgggaatgctttttgcgaatgcccttcatct
gactgtgacgaaaaaaacaagaccaaggtctgtggttctgacggagtgacctatggtgac
cagtgccagctgaagactattgcctgccgacagtccatgaaaattaccattaaacacacg
gggcagtgcagagaaaacatccctcatggatcgattgctgttcccacgtccaccccctcc
actcccacaacccgtgccaaacgaccaaccaccaccctctcagatcccattgaagaagag
gaggaggaggaggaggaggacgctgtcaccgcctcacaggtccttgttgaagcgctgcca
gtgttaactaccagcgctagcaggctgacaacaagacctcccagcaccaccaaatcaccc
tcccgctccaccaagccacccctccccacccccagagacgcacccacagctcgccccacc
accagctctcccaccgtcaccccctccccatcaactctctccttcgaggactctggcagc
ggggaacccagtggggaacccagcggggacgatgaccttgaggctagcggagcagccgaa
actagcggagatgagcctatcggtaaacctgctgttccaaagcctactgttcgccccacg
acgactgcaagcccagcagagaggtcaccctgcgacaatacagccttcgggtgctgtcct
gacagcaagaccgctgccactgacacagagggagccaactgccctccaaccaaggagttc
catgcagtcctcatcctggaggaagtggaaggtcaggaagtgttctacaccccagagatg
gccgaccccaagtcagagctgtttggagaaacggccagaagcattgagagtgcactcaac
gagctgctaagaaagtctgatgtggagaaagatttcaagagcgtccgtgtccgagaccta
ggcccgagcggctccatacgtgccacagtggaagcccactttgacccagcaaccacctac
acttcccaggatgtgcagaaggccctcctcaaacagctgaagatgtccaagaagaaggcc
attgctgttaagaaaccagaagaggagcatatcagagtcctggacttcgactgggtacca
aatccatttgccacaaccaccacgacaaccacagcagccaccactgtcccccccactacc
accaccatcaccaccaccaccgcccggctcctgagcagcacacggaggaggccagccact
acagcacgcaccaccagacgaccttccacggccaggagagccaccacgcctgcccctacc
accaccaccccaactcccactacccccggcaaggtgttctttcctccccgtcagacaccc
tgtgattcccatccctgccgacacggaggaacctgcgaggatgacggccaggatttcacc
tgcatctgcccagccgggagaggagggtctgtctgtgagaaagctattaaatactacatt
cctgcttttggtggcaagtcttatctggccttcaagactataaaggcctaccacacggtg
cgcatctccatggagttccgtgcctccgagctcagtggcctgctgctctacgacggacag
aaccgcggcaaggacttcatctcgctggctctcatcaacggctttgtggagctcagattc
aacaccggttcaggcactggcatcatcaccagcaagatccggatcgagcctggtaaatgg
caccaagtcctggtgaatcgcaaccgtcgcaatggcatgctgtctgtggacggagagccg
catgtcaatggagagagcccggctggaacggacgggctgaacctggatacagacctcttc
atcgggggagcccctgaggaccagatggctgttgtacaggagaggacttcagctgcttca
ggccttgtgggctgcatacgcatgctggacgtcaataacctggtctacaagctccaggag
aaagagggggatgtgttgtatggcactggggtcggagagtgtggcaacaacccttgccac
cccaacccttgtaagaacggagctcgctgccaggtgaaggaggcagagatgtttcattgc
cagtgcatcaacggcttctcgggccctacctgtgctgacgagcataacccatgtgacccc
aacaagtgccattcttcagccacttgtctggtgctgcctgagggcgggtacaagtgtgag
tgcccaatgggacgagagggaaagcactgtgaaaaagaaatgcatgaccagaccaaggct
ttcatcccagagttcaaaggggattcttacatggagctgaatggactgcacgcctttgga
attgatctgatgcaaaagctgagcatcactgtggtgttcctggcaaaggatctcacaggc
ctgatcttctacaacggacagaagacagacggcaaaggagacttcatctcgctggcactg
aacgacggcacgctggagttcagatacgacctggggaaaggccctgcagtgatcaggact
aagaacaagattcagctggacgtctggaatgtggtaactttggaacgaaacggtcgtaaa
ggtgtgataactgtgaacaatggggaagcagagagaggagagtcgccgaaatctcgcaag
gaccagcataccgctctcaacctgaagcaatccctgtttgtgggcggagctcctgatttc
agtacactggcccgggctgcttctgttaacaatgggttcactggagccattcaaaagatt
tcactgatgggcattgtggttctgaagaaggattatgtcctgaaagccgtggatgtctcg
gtgtaccgtgctcacccctgctctaagagccccagtgtgtgtcacaacgcagggatctgc
caccccaaactggactcctatgagtgtgtgtgccagcatggcttctccggcacgcgctgt
gaaaatgcaatcgtcgagaagtcagcaggagagactgaagcgatcgcattcgatggccgg
acattcatggagtatcacaacgcagtgacaaagagccaagtgaccaatgagatcccagat
cctgaatctgtggacgatcctttggaccaaagtgagaaggcccttcaggtgaacagcttt
gagctcagtatcaagacagaggccacacagggtctgattctctggagtggcaaaggagtg
gaaaggtccgactacatagccttggccattgtggacgggcacgtgcagatggcctatgat
cttgggtccaagccagtggtcctcagatcaaccatcccggtcaacacaaacaaatggatc
aaaattaaagccagcagggaacagagagatggcacgctacaggtcggcaatgaagctcct
gtcaccggatcatctcctctggcagcaacgcagcttgatactgacggagcactctggctt
ggtggactggaaaggctgtctgtggctcacaagcttcacaaagcctacagcacaggcttc
atgggatgcatgaaggaggtgatcgtggacagccaggagctgcatcttgtggaggacgct
ctaaacaaccccaaaatattacactgttcgtccaaataa
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integrated database retrieval system
