KEGG   Acipenser ruthenus (sterlet): 117432260
Entry
117432260         CDS       T07327                                 
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B'
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117432260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arut03019]
    117432260
   03041 Spliceosome [BR:arut03041]
    117432260
   03032 DNA replication proteins [BR:arut03032]
    117432260
Messenger RNA biogenesis [BR:arut03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     117432260
Spliceosome [BR:arut03041]
 Complex A
  U1 snRNP components
   Sm proteins
    117432260
  U2 snRNP components
    117432260
 Complex B
  U1 snRNP components
    117432260
  U4/U6.U5 tri-snRNP components
    117432260
 Complex C
  U2 snRNP components
    117432260
DNA replication proteins [BR:arut03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     117432260
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 117432260
NCBI-ProteinID: XP_033909819
LinkDB
Position
28:complement(9709003..9714505)
AA seq 237 aa
MTVGKSSKMLQHIDFRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQPE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGVAGGPGVGRAAGRGVPAGAPM
PQAPAGLAGPVRGVGGPSQQVMTPQGRGAAAAAAAGASIAGAPTQYPPGRGGPPPMGRGA
PPPGMMGPPPGMRPPMGPPMGMLPGRGAPMGMLPPGMRPPPPGMRGPPPPGMRPPRP
NT seq 714 nt   +upstreamnt  +downstreamnt
atgactgtggggaagagcagcaagatgctgcagcacatagacttcaggatgcgctgcatt
ctccaggacggcagaatcttcatcggcaccttcaaagcttttgacaagcatatgaatctc
atcctgtgtgactgtgacgagttcaggaagatcaagcccaagaactcgaagcagcctgag
cgagaggagaagcgtgtgctgggcctggtgcttctgcgtggagagaacctggtctccatg
actgtggagggacctccccccaaagacactggcattgccagagtgcccttggctggtgtt
gcaggaggaccgggtgtgggcagggctgctggcagaggagtcccggcaggagcgcctatg
ccccaagccccagcaggactggcaggccccgttcggggagtgggtggcccttcacagcag
gtcatgaccccccagggtcggggtgcagcagcggccgcagcagcaggtgccagcatcgcc
ggagcccccacccagtacccacctggaagagggggacccccacccatgggtagaggagcg
ccaccaccaggaatgatgggtcctcccccaggaatgaggccgcccatgggccccccgatg
ggcatgcttcccggccgcggtgctcccatgggaatgctccctcctggaatgagaccccca
ccccctggaatgagaggcccccctcctcctggaatgcgcccccccagaccctga

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