Acipenser ruthenus (sterlet): 117433520
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Entry
117433520 CDS
T07327
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117433520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117433520
Spliceosome [BR:
arut03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
117433520
Complex C
U5 SnRNP specific factors
117433520
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Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
117433520
NCBI-ProteinID:
XP_033911734
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All DBs
Position
31:5833658..5867517
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AA seq
970 aa
AA seq
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METDLYDEFGNYIGPELDSDEEDDLDRDPRDADEEDEDDEEEPADQDEEHPGMEVVLHED
KKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQELPSTVYDMEFLADL
MDSPELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDQDLRYTDILFTEQERGVGIK
STPVTMVLPDSRDKSYLFNIMDTPGHVNFSDEVTSGIRISDGIVLFIDAAEGVMLNTERL
IKHAVQERLAVTICINKIDRLMVELKLPPTDAYYKLRHIVDEVNSLLSMYSTDENLIVSP
LLGNVCFSSSQYSICFTLGSFAKIYSDTYGDISYNEFAKRLWGDIYFNPKTRKFTKKAPN
SNSQRSFVEFVLEPLYKILAQVVGDVDTSLPRVLDELGIHLTKEELKLNIRPLLRLVCKK
FFGEFTGFVDMCVQHIPSPQDGAKNKIEHSYNGGLDSDLGEAMAECDPDGPLMCHTTKMY
STEDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTIGRLWISVARYQIEVN
RVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELPK
MLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTF
CETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKY
DWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDE
PIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADC
VSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFH
HWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELA
KQDVVLNYPM
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgatctgtatgatgagttcgggaactacatcggaccggagctggactcggac
gaggaggatgacctggaccgcgacccccgcgatgcagacgaggaggacgaggatgatgag
gaggagccagctgaccaggatgaggagcaccctgggatggaggtggtgctccacgaggat
aagaagtactaccccactgcggaggaggtgtacgggccagaggtggagaccatagtccag
gaggaggacacacagcccctcacagagcccatcatcaaaccagtcaagacaaagaagttc
acactgatggagcaggagctgcccagcactgtctacgacatggagtttctggctgatctg
atggacagtccggagctgatcaggaacgtcaccctctgtggacacctgcaccacggcaag
acgtgcttcgtggattgcctaatcgagcagacccacccagagatcaggaagagggacgac
caggatctccgctacactgacatcctcttcacagagcaggagaggggggttgggatcaaa
agcaccccggtgaccatggtgctgccggactccagagacaagtcctacctgttcaacatc
atggacacaccaggtcatgtgaacttctctgatgaggtgacctctgggattaggatctcc
gatggcatcgtgctctttattgatgcggccgagggggtgatgctgaacacggagcggctg
attaagcatgctgtgcaggagcgtctggccgtcaccatctgcatcaacaagatcgaccgg
ctcatggtggagctgaagctgccgcccactgatgcctactacaaactgcggcacatcgtg
gacgaggtcaacagcctgctcagcatgtactccacggatgagaacctgatcgtgtctccc
ttgctggggaacgtgtgcttctccagctcccagtacagcatctgcttcacgctgggctct
ttcgccaagatctactccgatacctacggtgatatcagctacaatgaattcgctaagagg
ctctggggagacatctacttcaaccccaaaacgagaaagttcaccaaaaaggctccaaac
agcaactcccagcgcagtttcgtggagtttgtcctggagccactatacaagatcctggcc
caggtggtgggtgatgttgacacctccctccctcgggtgctggatgagctggggatccac
ctgaccaaggaggagctcaaactgaacatccgcccgctgctgcgcctcgtctgcaagaag
ttcttcggggagttcacaggttttgtggacatgtgtgtgcagcatatcccttctccacaa
gatggcgctaaaaacaagattgagcactcgtacaatgggggcctggactctgatttgggg
gaggccatggcagaatgcgaccctgacggtccgctgatgtgccacaccactaagatgtac
agcacggaggacggggtgcagttccatgccttcgggagggtgctgagcggcactatccac
gcgggacagcccgtcaaggtgctgggggagaactacaccctggaggacgaggaggactcg
cagatctgcaccatcggccgcctctggatctccgtggccaggtaccagatcgaagtgaac
agggtgcccgctggcaactgggtgctgatagaggggtgcgaccagcccatcgtcaagact
gccaccatcacagagccgcggggcaacgaggaggctcagatctttaggcccctgaagttc
aacactgcctctgtgatcaagatcgctgtggagcccgtcaacccctccgagctgcccaag
atgctggacggcctgaggaaggtcaacaagagctacccctccctcaccaccaaggtggag
gagtcgggggagcatgtgatcctgggcactggagagctctacctggattgtgtgatgcac
gacctccgcaagatgtactctgagatcgacatcaaggtggcggaccctgtggtgacgttc
tgcgagacggtggtagagacgtcctccctcaagtgtttcgctgagacccccaacaagaaa
aacaagatcaccatgattgcagagcctctggagaaagggctggctgaggacatcgagaac
gaagtggtccagatcacatggaacaggaagaagctaggagaattcttccagacgaagtat
gactgggatctgctagcggctcgttcgatctgggcgttcggacctgacaccacgggtccc
aatattctggtcgatgacacgctaccttcagaggtggacaaggccctgctgggctccgtg
aaggacagcatcgtgcagggcttccagtggggaaccagagaagggccgctgtgtgacgag
ccgatccgcaatgtgaagtttaagatcttggacgctgtgattgctcaggagccgctgcac
agaggaggagggcaggtcatccccacagcccgcagagtggtgtactccgctttcctcatg
gccacccctcgtctgatggagccctactactttgtggaggtccaggctccggctgactgt
gtctctgctgtctacaccgtgctggctcgcaggagaggtcatgtgacccaggacgccccc
atccctggctcccctctctacaccatcaaggctttcatcccggccatcgattcgtttggt
ttcgagacagacctgcggactcacacccagggacaggctttctccctgtctgtattccac
cactggcagattgtgccgggtgaccccctggataagagcatcgtgatccgtcctctggag
ccccagccggcccctcacctggccagagaattcatgatcaagacccgccgacgcaagggt
ctcagcgaggacgtcagcatcagcaagttcttcgatgatcccatgttgttggagctggcc
aagcaggacgtggtgctcaactatcccatgtag
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