KEGG   Acipenser ruthenus (sterlet): 117433981
Entry
117433981         CDS       T07327                                 
Name
(RefSeq) tumor necrosis factor-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut04010  MAPK signaling pathway
arut04060  Cytokine-cytokine receptor interaction
arut04150  mTOR signaling pathway
arut04210  Apoptosis
arut04217  Necroptosis
arut04350  TGF-beta signaling pathway
arut04620  Toll-like receptor signaling pathway
arut04621  NOD-like receptor signaling pathway
arut04622  RIG-I-like receptor signaling pathway
arut04625  C-type lectin receptor signaling pathway
arut04920  Adipocytokine signaling pathway
arut05132  Salmonella infection
arut05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:arut00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    117433981
   04350 TGF-beta signaling pathway
    117433981
   04150 mTOR signaling pathway
    117433981
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    117433981
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    117433981
   04217 Necroptosis
    117433981
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    117433981
   04621 NOD-like receptor signaling pathway
    117433981
   04622 RIG-I-like receptor signaling pathway
    117433981
   04625 C-type lectin receptor signaling pathway
    117433981
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    117433981
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117433981
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117433981
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:arut04052]
    117433981
   00536 Glycosaminoglycan binding proteins [BR:arut00536]
    117433981
Cytokines and neuropeptides [BR:arut04052]
 Cytokines
  Tumor necrosis fators
   117433981
Glycosaminoglycan binding proteins [BR:arut00536]
 Heparan sulfate / Heparin
  Cytokines
   117433981
SSDB
Motif
Pfam: TNF Asp_Glu_race_2
Other DBs
NCBI-GeneID: 117433981
NCBI-ProteinID: XP_033912352
LinkDB
Position
Unknown
AA seq 234 aa
MDSQKTTLDLENGSKVLLRDTQHRTRVNMMCAVSLLGLALVGTLLFAGLHNRGSSTGADS
QNDELLRVKDELEENAFKVRTLKQLASKPSKAAAHLIADVTDDKKAVTWLNDVDQAFANG
IENTEDKIVVPRSGLYFVYSQVSFKGQCKKGQPVYLSHNIERLAMSYTEKRNLLSASKTA
CVETHGSSKDIWYKSIYQGAVFKLEKGDTLSTKTGGVDKLVVDGGNSFFGVFEL
NT seq 705 nt   +upstreamnt  +downstreamnt
atggactctcagaaaacgactctcgacctggagaatggaagcaaagtgctcttaagagac
actcaacacagaacccgtgtaaatatgatgtgcgctgtctcgctgcttggtctcgcactg
gtcggtacgctgctgttcgccggacttcacaatagggggagctctaccggtgccgactct
cagaatgatgaacttttgcgagtcaaggatgaattggaagagaatgcttttaaggttcga
acactaaaacaactggcgagcaagcccagcaaagcagccgcacatttaatagctgatgtt
acagacgacaaaaaagcagtgacgtggctgaatgacgtcgaccaagcgtttgcaaacggg
attgagaataccgaagacaagattgtggtgcccaggagcggtctctacttcgtgtactcg
caggtgtcgttcaagggacagtgtaagaaagggcagcccgtatatctgtcgcacaacatc
gagcgacttgccatgtcctacactgaaaaacgaaatctcctgagcgcctcaaagaccgcg
tgcgtagagacgcacgggtcctcgaaggacatctggtataaatccatctaccaaggagcc
gtctttaaactggaaaagggcgacacgctgtccaccaaaactggaggggttgacaaactt
gtagtcgatgggggaaactctttctttggagtttttgagctctaa

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