Acipenser ruthenus (sterlet): 117962601
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Entry
117962601 CDS
T07327
Name
(RefSeq) TNF receptor-associated factor 3-like isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04620
Toll-like receptor signaling pathway
arut04621
NOD-like receptor signaling pathway
arut04622
RIG-I-like receptor signaling pathway
arut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117962601
04621 NOD-like receptor signaling pathway
117962601
04622 RIG-I-like receptor signaling pathway
117962601
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117962601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
Sina_ZnF
ATG16
CCDC22_CC
MscS_porin
CALCOCO1
zf-C3HC4
zf-TRAF_2
Fez1
DUF1664
DUF724
ATG17_like
AAA_13
MAD
DUF4201
Exonuc_VII_L
Seryl_tRNA_N
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
117962601
NCBI-ProteinID:
XP_034774307
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MLKLTNITPNFTELCSQKQALHHIRKVMSAGRNVDLPLELQTQLQRLNPARPPPASRPGS
MRLELSPPPSSFMPLHRGFKDRFVQPLEPKYCCESCKLALCNPRQTECGHRFCESCIRDL
LCLQPPICPADGEPLYEDKIFTDVCCRREIMGLKVFCRNEKNGCQEQMTLQLLLEHLQDC
PYYEITCPRAECKDTFLRKDVSDHLETKCKYRDTICTYCKRTVLLADQKKHEESVCPAFP
VTCPNKCSYSSVLRSQLTNHRHECPNAQANCMFSRYGCTFKGLNQDMKEHESRFMSEHLK
LMVARNSSLETKMEDVKTELQERYKVLPSLNTRIIELENRYEEVREKSKEMEQKISNVQK
LLGSHSEKVMEMEMELRLLRQAKDDVETLKSTVESIRSRVAVLEGSGRGGGGAGTHALGP
LETQLARHDDMLSVHEIRLADMDLRFQVLETASYSGTLVWKIRDYKRRKQEAVMGKTLSL
YSQPFYTGYFGYRMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMD
QGPARKHLGDAFKPDPNSSSFKRPAGDMNIASGCPLFVAQTVLENGTYIKDDTIFIKVVV
DASDLPDP
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagctgacaaacattacacccaacttcacagaactttgctcacaaaaacaggca
ctccatcacattagaaaggtcatgtcagctggtaggaatgtggacttgcctctggaactg
cagacccagctgcagcggctcaacccggcccgccccccccctgcatcgcggccgggctcc
atgcgcttggaactgagcccccccccctcctccttcatgccgctccacagggggttcaag
gaccgcttcgtccagccgctggagcccaagtactgctgcgagtcctgcaaactggccctg
tgcaacccccggcagaccgagtgcgggcaccgcttctgtgagagctgcatccgggacctg
ctctgcctccaacccccaatctgtccagctgatggcgagcctctctatgaggacaaaata
tttactgatgtgtgctgcaggagagagatcatggggctcaaagtgttctgtcggaatgaa
aagaacggctgccaagagcagatgacgctgcagcttcttctagaacatttacaagactgc
ccgtattacgagatcacgtgtccccgggctgaatgtaaagacacatttctacgaaaagac
gtgtctgaccacctagaaacaaaatgcaaatatagagacacaatatgcacttactgcaag
aggacggtgttgttagcagatcagaagaaacatgaagaatcggtctgtccagcctttcct
gttacttgcccaaacaaatgtagctatagctctgttttacgaagtcagctaactaaccac
cggcatgaatgccctaacgcccaagcaaactgtatgttcagtcgctatggatgcaccttt
aagggattaaaccaagacatgaaagagcatgagtcacgcttcatgagcgagcatctcaaa
ctgatggtggcaagaaactccagtctagagaccaagatggaggatgtgaagactgaactg
caggaaagatacaaagtccttcccagtctgaacactcgaatcattgagctagaaaacaga
tacgaggaagtgcgggaaaaatcaaaggaaatggaacagaagatcagtaacgtacagaag
ctgctgggctctcactcggagaaggtgatggagatggagatggagctgcgcttgctcagg
caggcgaaggatgatgtggagactctgaagagcacagtggagtcgatccgcagccgtgtg
gctgtgctggaggggagcggcagaggaggaggaggggccgggacacacgcactgggccct
ctggagacgcagctggcgaggcacgatgacatgctgagcgttcacgagatccgtctggct
gacatggacctgcgcttccaggtgctggagacggcgagctacagcgggacgctggtctgg
aagatcagggactacaagcggaggaagcaggaggcagtgatggggaagaccctgtcgctg
tacagccagcccttctacaccggatacttcggctacaggatgtgtgcgcgggtctacctc
aacggggacgggatgggcaaaggcacccatctgtccttgttcttcgtggtgatgcgaggg
gagtacgatgccttgttgccctggccattcaaacagaaagtcaccctcatgctgatggac
caggggcccgccaggaaacatttaggggatgccttcaagccagaccccaacagcagcagc
tttaagcggccggcaggggacatgaacatcgcttctggttgcccgctgtttgttgcccaa
actgtgttagaaaatgggacgtatatcaaagatgacaccatatttattaaagtggtggtt
gatgcttcagacctgccagatccatga
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integrated database retrieval system
