Acipenser ruthenus (sterlet): 117966046
Help
Entry
117966046 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: plakophilin-1-like
KO
K10387
plakophilin 1
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
arut04812
]
117966046
Cytoskeleton proteins [BR:
arut04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
117966046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_EZ
HEAT
Adaptin_N
Atx10homo_assoc
Arm_2
Nipped-B_C
PriA-like_WH
Motif
Other DBs
NCBI-GeneID:
117966046
NCBI-ProteinID:
XP_034767316
LinkDB
All DBs
Position
37:3091428..3112250
Genome browser
AA seq
718 aa
AA seq
DB search
MSSRNLTQMSTYFKTATVPESFPRVDSTSLALPSDKTMLSGGALGQQRVAEQVFSTLKRN
KTIQRTESSSTKESTTRQNGFNFKMSPTTPTGSAFFSNNVNGNQYSTYSSKKQFYNQHSL
PAVKYRNNSMVSSKRQFSSNSQRESQFSPTSPSNGFQSYKTMTTSRSEPDIPQIIKSSTL
PNYQSKRHSTYRVKNGYMTMPYSVNGNQVQTAANQYNSQQTMVDGGMAASRLTLREAVDC
LEQRDENLQYCGASFIQHASFQEDKTKQEVYSLGGIPKLVALLNSRSPQVQQAASGALRN
LVFKYQTNKMEVKRNNGIYEALKLMRQTDCPETQKQLTGLLWNLSSADELKPELVRDALP
ILTEKVVVPFAGWSEQGIQLNNRLDPEIFYNATGCLRNLSSANQSDRDAMRNCRGLIDSL
VSYVQTCVSADRPDDKSVENCVCILHNLSYQLEKEAPAQFSHISALASSPTRDLATNDSS
SMGCFSPRSSQVPQENSIALPVPEDSNPRGMGWLFNSKTMQTYLSLMGXEQEDATLEACT
GALQNITANNGIVSNVMSQAIVQKLNGLPEVSRLLKSSNPGVQKTATSLLGNLSRNPSLQ
SVMSRQILPDITQVLTSGAHNAAGSDDMMATACHTIRNLVVSNPESAKGVMGNNVLSTLR
DLSRNGYSPKSSKAAAILLYDLWGQKELQSFFKKQGVNKNIFVNDITNSAYKTLQGVM
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccagaaacttgacacagatgtcaacttattttaagacggcgacggtccccgag
agtttcccccgggtggatagcacgtccctggcgctgccttcggacaagaccatgctatca
ggaggtgccctcggacagcagcgcgtagctgagcaggtttttagtacgttaaagagaaac
aagacaattcagagaactgaaagcagctccacaaaagaaagcacaacacggcagaatgga
ttcaatttcaagatgtcccccacaacgcctactggaagtgctttcttttcaaacaatgtc
aacggaaaccaatacagcacttacagttcgaaaaaacagttttataaccagcatagcctg
ccggctgtgaaataccgcaataacagcatggtctcctcaaagagacagttcagctccaac
agccagagggagagccagttctcacccaccagcccaagtaatggcttccagtcttacaag
accatgactaccagtcgaagcgagcctgatataccacagatcatcaagtcgtccacactg
cccaactaccagagcaaacgccacagcacgtacagggtcaagaatgggtatatgaccatg
ccctactctgtaaatggaaaccaagtccaaactgcggccaaccagtacaactcccagcag
acaatggtagacggtggcatggcagcttcgagactcacccttcgcgaggctgtggattgc
ctagagcaaagagatgagaacctgcagtactgtggagcctctttcatccagcacgccagc
ttccaggaggacaagacaaagcaggaggtgtactctcttggtgggattcccaaactcgtg
gccctgctcaacagcagaagcccccaggtccagcaggcagcctccggcgcgctccgcaac
ctggtcttcaaataccagaccaacaagatggaagtgaagaggaacaacggcatctatgag
gctctgaagctgatgaggcaaaccgactgcccggagacacagaaacaactcacagggctg
ctgtggaacctgtcctcggctgatgagctcaagccagagctggtcagagacgctctcccc
atcctcactgagaaagtggtggtgcccttcgcaggctggtcagagcaaggcatccagctc
aacaaccgcctggacccagagatcttttacaatgccacaggctgcctcagaaacctgagc
tcggcaaaccagagtgaccgtgacgccatgcgcaactgccggggtctgattgactctctg
gtcagctacgtccagacctgtgtgagtgctgaccgtcccgatgacaagtcagtggagaac
tgcgtttgcattctacacaacctgtcgtaccagctggagaaggaggcccctgcccagttc
agccatatcagcgccctggccagctccccgacccgggacctcgccaccaacgactcctcg
tccatgggctgcttcagcccacgtagcagccaggtcccccaggagaactccattgctctc
cctgtcccggaggacagcaaccccagagggatgggctggctgttcaactccaagaccatg
cagacgtacctgtcactgatggganaagagcaagaagatgctacactggaggcctgtacc
ggggcgctgcagaacatcactgccaacaacggaatagtgtccaacgtgatgagccaggcc
atcgtgcagaagctcaacgggctaccagaggtatcacggctcctcaagtccagtaaccca
ggcgtccagaagactgccacgtcgctgctggggaacctgtcccgaaaccccagcctgcag
agcgtcatgagtcgtcagattctccctgacatcacgcaggtccttaccagcggagcacac
aacgcggccggctcggacgacatgatggccacagcctgccacaccatccgcaaccttgtg
gtctccaacccggagtcagccaagggagtaatgggcaacaatgtgttgtccacgctccgc
gacctcagcagaaacggatattccccgaaatccagcaaagccgctgccatcctgctgtat
gacctctggggacagaaggagcttcagagcttctttaaaaagcaaggggtgaacaaaaat
atctttgtgaatgacatcaccaattcagcttataaaaccctgcagggggtgatgtga
DBGET
integrated database retrieval system
