KEGG   Acipenser ruthenus (sterlet): 117968748
Entry
117968748         CDS       T07327                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DP beta 1 chain-like
  KO
K06752  MHC class II antigen
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut04145  Phagosome
arut04514  Cell adhesion molecules
arut04672  Intestinal immune network for IgA production
arut05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:arut00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    117968748
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117968748
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    117968748
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117968748
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:arut04147]
    117968748
Exosome [BR:arut04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117968748
  Exosomal proteins of epithelial cells
   117968748
  Exosomal proteins of breast milk
   117968748
SSDB
Motif
Pfam: C1-set MHC_II_beta Ig_3 C2-set_3 C2-set_2 Psg1 ETRAMP Ig_2
Other DBs
NCBI-GeneID: 117968748
NCBI-ProteinID: XP_034772436
LinkDB
Position
Unknown
AA seq 266 aa
METSSLQISSLYTQCLRGLVLVSLMSCCRKTSFGVEGYLMQTMRDCDYSDSSMTDMVFSL
RYVFNQEEFIHYDTKIQKFVGKTACGVMNAERMNKDKDQLAVLLRQRDQVCKPNAELDLS
FTTDRKIPPSVRVRSMKPFSSQHQTMLVCNAFGFYPREIKMTWLRNGVKVTADVSSSELL
SDGDWTYQIHSYLELTPQSGDSYTCRVEHSALAEAIEEKWDPAMPESKRNKIIIGTSGIV
LGLVIAAAGLIYYKKKATGRILVPSD
NT seq 801 nt   +upstreamnt  +downstreamnt
atggaaacctcttcattgcagatctccagcctgtacacacaatgcctgcgggggctggtt
ctggtctctctgatgtcttgttgtaggaaaaccagctttggagtcgaaggttacttgatg
cagacgatgagagactgtgactacagtgacagcagcatgacggacatggtgttttcgctt
agatatgtttttaaccaggaggagtttattcactacgacaccaagatccagaagtttgtc
gggaagacagcctgcggggtgatgaatgcggagaggatgaacaaggataaggaccagctg
gcagtgctgctgagacagcgggatcaagtttgcaaacccaacgcggaactcgacctgagc
ttcacaacagataggaaaattccaccctctgtcagagtccgttctatgaaacccttcagc
tctcagcaccagaccatgctggtctgcaacgcgtttggcttctacccacgtgagataaag
atgacctggctgagaaatggagtgaaggtgacagctgatgtatcctcctcagagctgctc
tctgatggagactggacctatcaaattcactcgtacctggagctcaccccccagtccgga
gactcctacacctgcagggtggagcacagcgccctagctgaggctatcgaggagaagtgg
gatccagcgatgcctgaatctaagaggaacaagatcatcatcggaacttctggaatcgtt
ctgggcctggtcattgcagccgctggactgatctactacaagaagaaggctacaggtcgc
attttggtgccatcagattaa

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