KEGG   Acipenser ruthenus (sterlet): 117969055
Entry
117969055         CDS       T07327                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DR beta 3 chain-like
  KO
K06752  MHC class II antigen
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut04145  Phagosome
arut04514  Cell adhesion molecule (CAM) interaction
arut04672  Intestinal immune network for IgA production
arut05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:arut00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    117969055
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117969055
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    117969055
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117969055
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:arut04147]
    117969055
Exosome [BR:arut04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117969055
  Exosomal proteins of epithelial cells
   117969055
  Exosomal proteins of breast milk
   117969055
SSDB
Motif
Pfam: C1-set MHC_II_beta Ig_3 C2-set_3 C2-set_2 Ig_2 Cna_B
Other DBs
NCBI-GeneID: 117969055
NCBI-ProteinID: XP_034772850
LinkDB
Position
Unknown
AA seq 227 aa
MGTSSLQISSLYTQCLRGLVLVSLMMCSSKTSIGVDGYLMQVMSDCEYSDSSMTDMVFSR
SYVFNKKEFIHYDTKIQKYVGNTACGVKNAEEWNKDKAQLAGMLGQVDGYCKPNAELDLS
FTTDRKIPPAVRVRSMKPFSSQHQTMLVCYAFGFYPREIKVTWLRNGAKVTADVSSSELL
HDGDWTYQIHSYLELTPQSGDSYTCRVEHSTLAEAIEKKWGEFKLPR
NT seq 684 nt   +upstreamnt  +downstreamnt
atgggaacctcttctttgcagatctccagcctgtacacacagtgcctgcggggactggtt
ctggtctctctgatgatgtgcagtagcaaaaccagcattggagtcgacggttacttgatg
caggtgatgtctgactgcgagtacagtgacagcagcatgacggacatggtgttttcccgg
agctatgtttttaacaagaaggagtttattcactacgacaccaagatccagaagtacgtc
gggaacacagcctgtggggtgaagaatgcggaggagtggaacaaggataaggcccagctg
gcagggatgctgggtcaggtggatggatattgcaaacccaacgcggaactcgacctgagc
ttcacaacagataggaaaattccacccgctgtcagagtccgctctatgaaacccttcagc
tctcagcaccagaccatgctggtctgctacgcgtttggcttctacccacgtgagataaag
gtgacctggctgagaaacggagcgaaggtgacggctgatgtatcctcctcagagctgctc
catgatggagactggacctatcagatccactcgtacctggagctcaccccccagtccgga
gactcctacacctgcagggtggagcacagtaccctcgctgaggctatcgagaagaagtgg
ggtgagttcaaactgcctcgctga

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