Arthrobacter sp. YC-RL1: ATC04_11945
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Entry
ATC04_11945 CDS
T04187
Symbol
kgd
Name
(GenBank) alpha-ketoglutarate decarboxylase
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
ary
Arthrobacter sp. YC-RL1
Pathway
ary00020
Citrate cycle (TCA cycle)
ary00630
Glyoxylate and dicarboxylate metabolism
ary00785
Lipoic acid metabolism
ary01100
Metabolic pathways
ary01110
Biosynthesis of secondary metabolites
ary01120
Microbial metabolism in diverse environments
ary01200
Carbon metabolism
ary01210
2-Oxocarboxylic acid metabolism
Module
ary_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ary_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ary00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
ATC04_11945 (kgd)
00630 Glyoxylate and dicarboxylate metabolism
ATC04_11945 (kgd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
ATC04_11945 (kgd)
Enzymes [BR:
ary01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
ATC04_11945 (kgd)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
ATC04_11945 (kgd)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
ATC04_11945 (kgd)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
ATC04_11945 (kgd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ALQ32405
LinkDB
All DBs
Position
2580556..2584290
Genome browser
AA seq
1244 aa
AA seq
DB search
MPEQAHHRLTEEFGGNEWLVDELFEQYLVDKNSVDKKWWEIFESLAAEKSAPAAPASKPA
AAAPAAPAAPVVKGAPRAAAEARASEPAPASAAPVKKAEPSPKTAPIPAQAPKPTPSTGL
FGEEKRTALRGPMKAIATNMDASLTVPTATTVRAVPAKVMIDNRIVINNHLKRARGGKIS
FTHLIGFAVIRALKQIPSMNVTYDVIDKKPTAIQPAHVNFGIAIDMPKPDGTRMLAVPNI
KAAETLSFNEFWATYEDLIKRARGNKLTADDYAGTTVSLTNPGGIGTVHSVPRLSKGQAA
IIGVGALEYPAEFRGSAETTVARMGIGKHITLTSTYDHRVIQGAGSGEFLKLVESLLLGE
QGFYDEIFEQLRIPYEPVRWAVDNQVDIDLQVNKVARIQHLINSYRVRGHLMADTNPLEY
VQRKHPDLDIKSYGLTLWDLDREWISGGLGGKDRAQLRDILGILRDAYCRTIGTEYMHLQ
NPVEREWFQSKLERGYAKPTREEQLRILSKLNSAEAFETFLQTKFVGQKRFSLEGGESLI
PLLDAIISDAADEQLDEVAIGMAHRGRLNVLTNIAGKTYAQVFREFEGTATPGSVQGSGD
VKYHLGTEGSYTSDAGNETKVYLAANPSHLEAVDPVLEGITRAKLDRLGSGNAVLPILVH
GDAAFAGQGVVSEVLAMSQLPGYKTGGTVHVIVNNQIGFTTAPSSSRSSVYASDVARTVQ
APIFHVNGDDPEAVVHVGQLAFEYRQKFGKDVVIDLMCYRRRGHNEGDDPSMTQPIMYNL
IEAKRSTRKLYTEALVGRGDITQEEADNALAEYKANLERIFAETHAAQTSPIPIITPGST
INDLEKPFAQAADENTMDGARPSAISAQTLAHIGDAHSAIPEGFVMHTKLKSLLERRTKM
SREGGIDWGFAELAALGSLSMEGVPVRLAGQDSRRGTFVQRHAVFHDRENDNEWYPLKNL
SEDQASMWIYDSLLSEYAALGFEYGYSVERPDALVMWEAQFGDFVNGAQTVIDEFISSAE
QKWSQSSSLVMLLPHGYEGQGPDHSSARIERFLQLCAENNMVVAQPSTGANHFHLLRRQA
YARPRKPLIVFTPKQLLRLKAAASAVEDFTSGGFQEVIGDASITDANAVDKVLLCSGRVY
YDLLAARTKAGDSKTAIVRVEQLYPAPVEQIAAELAKYPNATASWVQDEPANQGPWPFFG
LYVAPNLDQKINLVSRPASAATSAGTAKRHEAENAVLIQQAFAR
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
gtgccagagcaagcacaccaccggctgactgaagagttcggtggaaacgaatggctagta
gatgagctgttcgaacagtatctcgttgacaagaactcggtagacaagaagtggtgggag
attttcgagtccctcgctgcggagaagtcggccccggccgcaccggcatcgaagccggca
gccgccgctccagccgcaccagcagctcctgtcgtcaagggcgctccgcgcgcggccgca
gaagcccgcgcctcggagccggccccggcatccgcagcaccagtcaagaaggccgagccg
tcgccgaagaccgctccaattccagctcaggccccgaagccgaccccgtcgaccgggctg
ttcggcgaggaaaagcgcaccgcgctgcgcggcccgatgaaggccatcgcgaccaacatg
gacgccagcctcaccgtgccgaccgccacgaccgtgcgcgccgtgccggccaaggtgatg
atcgacaaccgcatcgtcatcaacaaccacctcaagcgcgcccgcggcggcaagatctcc
ttcacccacctgatcggcttcgccgtgatccgtgcgctgaagcagatcccttcgatgaac
gtcacctacgacgtgatcgacaagaagccgaccgccatccagccggcccacgtcaacttc
ggcatcgctatcgacatgcccaagcccgacggcacccgcatgctggcggtgccgaacatc
aaggccgccgagaccctgagcttcaacgagttctgggccacctacgaggacctgatcaag
cgcgcccgcggcaacaagctgaccgccgacgactacgcaggcaccaccgtgtcgctgacc
aacccgggcggcatcggcaccgtgcactcggtgccccgcctgtccaagggccaggccgcc
atcatcggcgtcggcgccctggaatacccggcagagttccgcggttcggccgagaccacc
gtggcccgcatgggcatcggcaagcacatcaccctgacctccacctacgaccaccgcgtc
atccaaggggcgggttcgggcgagttcctgaagctggtcgaaagcctgctgctcggcgag
cagggcttctacgacgagatcttcgagcagctgcgcatcccgtacgagccggtgcgctgg
gccgtggacaaccaggtcgacatcgacctgcaggtcaacaaggtcgcccgcatccagcac
ctgatcaactcctaccgcgtgcgcggccacctgatggccgacaccaacccgctggaatac
gtccagcgcaagcacccggacctggacatcaagtcctacggcctgaccctgtgggacctg
gaccgcgagtggatctccggcggcctgggcggcaaggaccgcgcccagctgcgcgacatc
ctgggcatcctgcgcgacgcctactgccgcaccatcggcaccgagtacatgcacctgcag
aacccggtagagcgcgagtggttccagtccaagctggagcgcggctacgccaagccgacc
cgcgaagagcagctgcgcatcctgtccaagctgaactccgccgaggctttcgagaccttc
ctgcagaccaagttcgtcggccagaagcgcttctcgctggaaggcggcgaatcgctgatt
ccgctgcttgacgccatcatctccgacgccgccgacgagcagctggacgaggtggccatc
ggcatggcccaccgcggccgcctgaacgtgctgaccaacatcgccggcaagacctacgca
caggtcttccgcgaattcgaaggcaccgccaccccgggctccgtccagggctccggcgac
gtgaagtaccacctgggcaccgagggttcctacacctcggacgccggcaacgagaccaag
gtgtacctggcggccaacccgtcgcacctggaagccgtggatccggtgctcgagggcatc
acccgcgcgaagctggaccgcctgggctcgggcaacgcagtgctgccgatcctggtgcac
ggcgatgccgcattcgccggacagggtgtggtctccgaggttttggccatgagccagctg
ccgggctacaagaccggcggcaccgtgcacgtgatcgtgaacaaccagatcggcttcacc
accgcgccgtcctcctcgcgctcctcggtctacgcctccgacgtggcccgcacggtgcag
gccccgatcttccacgtcaacggggacgacccggaggcagtggtgcacgtgggccagctg
gccttcgagtaccgccagaagttcggcaaggacgtcgtcatcgacctcatgtgctaccgc
cgccgcgggcacaacgagggcgacgatccgtcgatgacccagccgatcatgtacaacctg
atcgaggccaagcgctcgacccgcaagctgtacaccgaggccctcgtcggccgcggcgac
atcacgcaggaagaggccgacaacgcactggcggagtacaaggccaacctggagcgcatc
ttcgccgagacccacgcggcgcagacctcgccgatcccgatcatcaccccgggctcgacc
atcaacgacctggagaagccgttcgcccaggccgcagacgagaacaccatggacggcgcc
cgtccatcggcgatctccgcgcagaccctggcccacatcggcgacgcccactcggcgatc
ccggagggcttcgtgatgcacaccaagctgaagtcgctgcttgagcgccgcaccaagatg
tcccgcgaaggcggcatcgactggggcttcgccgagctggcagccctgggctcgctgtcc
atggaaggcgtgccggtccgcctggcaggccaggactcgcgccgcggcaccttcgtgcag
cgccacgcggtcttccacgaccgcgagaacgacaacgagtggtacccgctgaagaacctg
tccgaggaccaggcatcgatgtggatctacgactcgctgctctccgagtacgccgccctg
ggcttcgagtacggctactccgtggagcgccctgacgcgctggtcatgtgggaggcgcag
ttcggcgacttcgtcaacggcgcccagaccgtgatcgacgagttcatctcctcggccgag
cagaagtggtcgcagtccagctcgctggtcatgctgctgccgcacggctacgagggacag
ggcccggaccactcctcggcccgcatcgagcgcttcctgcagctgtgcgcggagaacaac
atggtagtggcccagccgtccaccggcgctaaccacttccacctgctgcgccgccaggcc
tacgcccgtccgcgcaagccgctgatcgtgttcaccccgaagcagctgctgcgcctgaag
gcggccgccagcgcggtggaggacttcaccagcggcggcttccaggaagtcatcggcgac
gcctcgatcacggatgcgaacgccgtggacaaggtgctgctgtgctcgggccgcgtgtac
tacgacctgctggccgcacgcaccaaggccggggactcgaagaccgcgatcgtccgcgtc
gagcagctctacccggcaccggtcgagcagatcgccgccgagctggccaagtacccgaac
gcgaccgcgagctgggtccaggacgagcctgcgaaccagggcccatggccgttcttcggc
ctgtacgtggcaccgaacctggaccagaagatcaacctggtctcgcgtccggcatcggcc
gccacctcggccggcaccgccaagcgccacgaggctgagaacgcggtgctgatccagcag
gccttcgcccgctag
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