Alosa sapidissima (American shad): 121678322
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Entry
121678322 CDS
T11137
Symbol
pbx1b
Name
(RefSeq) pre-B-cell leukemia transcription factor 1b isoform X1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121678322 (pbx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121678322 (pbx1b)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121678322 (pbx1b)
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GFIT
Other DBs
NCBI-GeneID:
121678322
NCBI-ProteinID:
XP_041913705
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Position
12:complement(31413348..31480137)
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AA seq
447 aa
AA seq
DB search
MDEQSRLMHSHAGVGMTGHPGLSQHMQEGTGGSDGDGRKQDIGDILQQIMTITDQSLDEA
QARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPPDAQLMRLDNMLLAEGVSGPE
KGGGSAAAAAAAAASGGAGADNSAEHSDYRAKLSQIRQIYHTELEKYEQMVSGWRGSYAG
SHGKTNQACNEFTTHVMNLLREQSRTRPISPKEIERMVSIIHRKFSSIQMQLKQSTCEAV
MILRSRFLDARRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCQITVSQVSNW
FGNKRIRYKKNIGKFQEEANMYAARTAVNAASVSAQGSQANSPSTPNSAGSAGSFNMSNS
GDLFMSVQSLNGDSYQGAQVGANVQSQVDTLRHVISQTGGYNDGLTANQMYSPQGINANG
GWQDATTPSSVTSPTEGPGSVHSDTSN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcagtcccggttgatgcactctcacgcgggagtagggatgacagggcacccc
ggcctgtctcagcacatgcaggagggcaccggaggatccgacggtgacggaagaaaacaa
gacattggagacattttacagcaaatcatgaccatcacagatcaaagtctggacgaagca
caggccaggaaacacgcattgaactgtcaccgaatgaagccagcgctcttcaacgtcttg
tgcgaaataaaagaaaaaacagtgctcagtatccgcggcgcccaagaggaggagcctcca
gatgctcagctcatgcgattggataacatgctgctggccgagggtgtgtccggcccggag
aagggcggcggctcggccgcggcggccgcggccgcggcagcttcgggtggggccggcgcg
gacaactccgctgagcactcggactaccgggccaagctctcgcagatccggcagatctac
cacacggagctggagaagtacgaacagatggtatccggctggagaggcagttacgcaggg
agtcatggcaagacaaaccaggcatgtaacgagttcaccacccacgtgatgaacctgctg
cgggagcagtctcgtacgcggcccatctcgcccaaagagatcgagcgcatggtgagcatc
atccaccgcaagttcagctccatccagatgcagctcaaacagagcacctgtgaggccgtc
atgatcctgcgctcgcgcttcctggatgccagacggaaaagacggaacttcaacaagcag
gccacagagatcctgaacgagtacttctactcccacctgagcaatccgtaccccagcgag
gaggccaaggaggagctggccaagaagtgccaaatcacagtctcacaggtttccaactgg
ttcggaaacaagagaatccggtataagaaaaacatcgggaagttccaagaagaggccaac
atgtacgcagccagaactgccgtgaacgcagccagcgtctctgcacagggaagccaagcc
aactcgccctcaacccccaactccgcaggttctgctggctcttttaacatgtcaaactcc
ggggacttgtttatgagtgtgcagtctctcaatggggactcgtaccagggggctcaggtg
ggagccaacgtgcagtcgcaggtggatacccttcgccatgttatcagccagacaggcgga
tacaatgacggactcacagcgaaccagatgtacagtccgcagggcatcaatgctaatggc
ggatggcaggacgccacaactccctcgtcagtgacttcgcccacagaaggacctggaagc
gtccactccgacacatccaattga
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