Alosa sapidissima (American shad): 121680761
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Entry
121680761 CDS
T11137
Symbol
pbx3a
Name
(RefSeq) pre-B-cell leukemia transcription factor 3 isoform X1
KO
K15610
pre-B-cell leukemia transcription factor 3
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121680761 (pbx3a)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121680761 (pbx3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
DUF7260
LZ3wCH
TraG-D_C
HTH_NDX
UCH
Motif
Other DBs
NCBI-GeneID:
121680761
NCBI-ProteinID:
XP_041916223
LinkDB
All DBs
Position
13:3908098..3955159
Genome browser
AA seq
468 aa
AA seq
DB search
MEDPARIMQALGGVALGGHSVQGGMGLPPSHGLEGADGDGRKQDIGDILQQIMTITDQSL
DEAQAKKHSLNCHRMKPALFSVLCEIKEKTGLSIRGAQEDDPPDPQLMRLDNMLLAEGVS
GPEKGSASAAAAAAAAAVGGGVDNSVEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHV
MNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRN
FSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCQITVSQGVGSTITVSQVSNWFGNKRI
RYKKNIGKFQEEANLYAAKTAVNAAHAVAAAVQNSQADSPTTPNSGFQMKDEEFQMDATE
SKNSLLPNMFTGSSGSFNLPNSGDMFMSMQGLNGASYAGAQVGAGVQSQGDTIRHAISQA
VGYNDGLRGHLYSPHGLNGNGGWHDAPTPSSVTSPTEGAGSVHSDTSN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaggatccagcccgaatcatgcaggcactcggcggtgtcgctcttggtggtcattcg
gtgcaaggaggtatgggtttgccgccttcgcatggactcgagggggcggacggagatgga
agaaaacaagacatcggggacattctgcagcaaatcatgaccattactgaccaaagcttg
gatgaagcacaagcaaagaaacattccctcaactgtcacagaatgaaaccagcactcttc
agtgttctctgtgagatcaaagagaaaacaggtcttagtatccgtggcgcccaggaggac
gaccctccagacccgcagctcatgcgtctggacaacatgctgctggcggagggggtctcg
ggcccggagaagggaagcgcctcggccgcagctgcagctgctgccgctgccgtgggtgga
ggagtggacaactcagtggagcactcggactaccgcgccaagctcactcagatcagacag
atctaccacaccgaactggagaagtacgaacaggcgtgtaatgagttcaccacccacgtg
atgaacctgctgcgggagcagtcacgcacgcggcccatctccccaaaagagatcgagcgc
atggtgggcatcatccaccgcaagttcagctccatccagatgcagctcaaacagagcacc
tgtgaggccgtcatgatcctgcgctcacgcttcctcgatgccaggagaaaaagacggaac
ttcagcaagcaggccacagagatcctgaacgagtacttctactctcacctgagcaacccg
taccccagcgaggaggccaaagaggagctggccaagaagtgccaaatcaccgtctctcag
ggcgtggggagcaccatcacagtgtcacaggtgtccaactggtttggaaacaagcggatc
cgctacaagaagaacatcgggaagttccaggaagaggccaacctctacgctgccaagacc
gccgtgaatgccgcccatgctgtagccgccgccgtgcagaatagccaggccgactctccc
accacacccaactccgggttccagatgaaagatgaggagtttcagatggatgccacagag
agcaaaaactcacttttacccaacatgttcactggttcctctggctcctttaacctccca
aactcgggggacatgttcatgagcatgcaggggctcaatggggcctcctacgcgggggct
caggtgggagctggtgtgcagtcgcagggggataccatacgtcatgctatcagccaggcg
gtcggatacaatgacggcctgcgaggtcatctctacagtccgcacggtctaaatggtaat
ggaggatggcacgatgccccgaccccttcctccgtgacctcgcccacagagggggcgggc
agcgtccactcggatacctcaaactga
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