Alosa sapidissima (American shad): 121681626
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Entry
121681626 CDS
T11137
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
KO
K08536
liver X receptor alpha
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03320
PPAR signaling pathway
asad04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121681626 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
121681626 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121681626 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
asad03310
]
121681626 (nr1h3)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121681626 (nr1h3)
Nuclear receptors [BR:
asad03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
121681626 (nr1h3)
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Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
121681626
NCBI-ProteinID:
XP_041917399
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Position
14:complement(16256803..16270599)
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AA seq
455 aa
AA seq
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MSSLTTADITDVGHGDGKVFDGDDKLQLDCLGEESLSSEIKHEVQLVSLGTQAPFSDAAG
ELPGSLVMEPGDIKGDPAADPPPAQTEGQPLKRKKGPAPKMLGNEVCSVCGDKASGFHYN
VLSCEGCKGFFRRSVIKGAQYACKNSGRCEMDMYMRRKCQQCRLRKCREAGMLEQCVLSE
EQIRVKKMKKQQEEETARTSTVVTPNPIPDVPPLAPEQQEMIEKLVAMQKQCNKRSFLER
PKVTPWPQSQDPLNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQIALLKT
STIEIMLLETSRRYDPALESITFLKDFSYNKDDFAKAGLQFEFINPIFEFSKGMNDLHLD
EAEYALLIAINIFSADRPNVQDHDLVERLQQPYVDLLHSYIRIKRPADHLMFPRMLMKLV
SLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccttactacggctgatatcacagatgttggtcatggggacggtaaggtgttt
gatggagatgacaaactgcagcttgactgcctgggcgaggagagcctgtcctcagaaata
aagcacgaggtccagctcgtatccctcggcacccaggctcccttctccgatgctgcaggg
gagctgcccggctcactggtcatggaacccggtgacatcaaaggcgaccctgcagcggac
ccgccaccagctcaaacagagggtcagccgctgaagaggaagaagggcccggcgccaaag
atgctgggcaacgaggtgtgcagcgtgtgcggcgacaaggcctcgggcttccactacaac
gtgctgagctgcgagggctgcaagggctttttccgccgcagtgtcatcaagggcgcgcag
tacgcctgcaagaacagcggccgctgtgagatggacatgtacatgcgccgcaagtgccaa
cagtgccgcctgcgcaagtgccgcgaggcgggcatgctcgagcagtgtgttctgtctgag
gagcagatccgtgtgaagaagatgaagaagcagcaggaggaggagacggcgcgcacctcc
acggtggtcacgcccaaccccatccccgatgtgcccccgctggcgcccgaacagcaggag
atgatcgagaagctggtggccatgcagaagcagtgcaacaagcgctccttcctggagcgg
cccaaagtcactccgtggcctcagagtcaggaccctctgaaccgagaggtccggcagcag
cgctttgctcacttcaccgagctggccatcatgtccgtgcaggagatagtggactttgct
aagcagctgccaggcttcctggagctgacccgggaggaccaaatcgccttgctgaagact
tccaccattgagatcatgctgctagaaacgtcacggcgatacgaccccgccctggagagc
atcaccttcctaaaggatttcagctacaacaaggacgactttgccaaagcaggtctacag
tttgagttcatcaaccccatttttgagttttcaaaggggatgaatgatctccatctggat
gaagctgaatatgccctactcattgctatcaacatcttctctgcagaccggcccaatgtg
caggaccacgatttagtggagaggctccaacagccgtatgtagacttgctgcattcatac
atcaggattaagagaccagcggaccacctgatgtttccgcgcatgctgatgaagctggtc
agtctgcggactctcagcagcgtccactcagagcaagtgtttgccctgcgcctccaggat
aagaaactgccgccactgctctccgagatctgggacgttcacgaatga
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