KEGG   Alosa sapidissima (American shad): 121681626
Entry
121681626         CDS       T11137                                 
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
  KO
K08536  liver X receptor alpha
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad03320  PPAR signaling pathway
asad04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:asad00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    121681626 (nr1h3)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    121681626 (nr1h3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:asad03000]
    121681626 (nr1h3)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:asad03310]
    121681626 (nr1h3)
Transcription factors [BR:asad03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    121681626 (nr1h3)
Nuclear receptors [BR:asad03310]
 1. Thyroid hormone like
  1H. Liver X receptor like receptor
   121681626 (nr1h3)
SSDB
Motif
Pfam: Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 121681626
NCBI-ProteinID: XP_041917399
LinkDB
Position
14:complement(16256803..16270599)
AA seq 455 aa
MSSLTTADITDVGHGDGKVFDGDDKLQLDCLGEESLSSEIKHEVQLVSLGTQAPFSDAAG
ELPGSLVMEPGDIKGDPAADPPPAQTEGQPLKRKKGPAPKMLGNEVCSVCGDKASGFHYN
VLSCEGCKGFFRRSVIKGAQYACKNSGRCEMDMYMRRKCQQCRLRKCREAGMLEQCVLSE
EQIRVKKMKKQQEEETARTSTVVTPNPIPDVPPLAPEQQEMIEKLVAMQKQCNKRSFLER
PKVTPWPQSQDPLNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQIALLKT
STIEIMLLETSRRYDPALESITFLKDFSYNKDDFAKAGLQFEFINPIFEFSKGMNDLHLD
EAEYALLIAINIFSADRPNVQDHDLVERLQQPYVDLLHSYIRIKRPADHLMFPRMLMKLV
SLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgtcctcccttactacggctgatatcacagatgttggtcatggggacggtaaggtgttt
gatggagatgacaaactgcagcttgactgcctgggcgaggagagcctgtcctcagaaata
aagcacgaggtccagctcgtatccctcggcacccaggctcccttctccgatgctgcaggg
gagctgcccggctcactggtcatggaacccggtgacatcaaaggcgaccctgcagcggac
ccgccaccagctcaaacagagggtcagccgctgaagaggaagaagggcccggcgccaaag
atgctgggcaacgaggtgtgcagcgtgtgcggcgacaaggcctcgggcttccactacaac
gtgctgagctgcgagggctgcaagggctttttccgccgcagtgtcatcaagggcgcgcag
tacgcctgcaagaacagcggccgctgtgagatggacatgtacatgcgccgcaagtgccaa
cagtgccgcctgcgcaagtgccgcgaggcgggcatgctcgagcagtgtgttctgtctgag
gagcagatccgtgtgaagaagatgaagaagcagcaggaggaggagacggcgcgcacctcc
acggtggtcacgcccaaccccatccccgatgtgcccccgctggcgcccgaacagcaggag
atgatcgagaagctggtggccatgcagaagcagtgcaacaagcgctccttcctggagcgg
cccaaagtcactccgtggcctcagagtcaggaccctctgaaccgagaggtccggcagcag
cgctttgctcacttcaccgagctggccatcatgtccgtgcaggagatagtggactttgct
aagcagctgccaggcttcctggagctgacccgggaggaccaaatcgccttgctgaagact
tccaccattgagatcatgctgctagaaacgtcacggcgatacgaccccgccctggagagc
atcaccttcctaaaggatttcagctacaacaaggacgactttgccaaagcaggtctacag
tttgagttcatcaaccccatttttgagttttcaaaggggatgaatgatctccatctggat
gaagctgaatatgccctactcattgctatcaacatcttctctgcagaccggcccaatgtg
caggaccacgatttagtggagaggctccaacagccgtatgtagacttgctgcattcatac
atcaggattaagagaccagcggaccacctgatgtttccgcgcatgctgatgaagctggtc
agtctgcggactctcagcagcgtccactcagagcaagtgtttgccctgcgcctccaggat
aagaaactgccgccactgctctccgagatctgggacgttcacgaatga

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