Alosa sapidissima (American shad): 121683822
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Entry
121683822 CDS
T11137
Symbol
otx5
Name
(RefSeq) orthodenticle homolog 5
KO
K09337
cone-rod homeobox protein
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121683822 (otx5)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121683822 (otx5)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
CPSF73-100_C
SatD
Motif
Other DBs
NCBI-GeneID:
121683822
NCBI-ProteinID:
XP_041919599
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Position
15:complement(30699002..30704675)
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AA seq
296 aa
AA seq
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MMSYIKQPHYAVNGLTLSGPGMDLLHSAVAYPNTPRKQRRERTTFTRAQLDILEALFSKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQSKPRPPKKKASPAREPN
SAEASVSNNGPYSPAPPPPGTAITPNSSGASATVSIWSPASISPLPDPLSASSAPCMQRT
SAYPMTYTQAPAYSQSYGASSSYFTGLDCSSYLSPMHPQLSATGGALSPITASTMGGPLS
QSPASLSSQGYTAASLGFGAVDCLDYKDQAASWKLNFNAADCLDYKDQNSWKFQVL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacattaagcagcctcattacgccgtgaacgggttaactctgtccggcccg
ggcatggacctgctacactccgccgtcgcatacccaaacactccgagaaagcagcgcagg
gagaggaccacgttcacccgcgcgcagctagacatcctggaggcgctgttctcaaagaca
cgctaccctgacatcttcatgcgcgaggaggtggcgctcaaaatcaacctgcccgaatct
cgagtccaggtgtggttcaagaaccggcgggccaagtgccgtcagcagcagcaacagagc
agcggtcagtccaagccgcggccgcccaagaagaaggcttcgccggcccgcgagcccaac
agcgccgaggccagcgtcagcaacaacgggccctacagtcccgcgccacccccgcctggc
acggccatcacgcccaactccagcggcgccagcgccaccgtgtccatctggagtccagcg
tccatctcaccgctgcccgacccgctgtccgcctcgtccgcaccctgcatgcagcgcacc
tccgcctaccccatgacctacacgcaggcgcccgcctacagtcagagctacggcgcctcg
tcctcctacttcaccggcctggactgcagctcctacctgtcccccatgcacccgcagctg
tccgccaccgggggcgccctcagccccatcaccgcctccaccatgggcggcccgctgagc
cagtcgccggcctcgctgtcctcccagggctacaccgccgcctcgctgggcttcggcgcc
gtcgactgcctggactacaaggaccaagccgcctcctggaaactcaacttcaacgcggca
gactgcctggactacaaggaccagaattcctggaagtttcaggtgttgtag
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