Alosa sapidissima (American shad): 121685318
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Entry
121685318 CDS
T11137
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
asad
Alosa sapidissima (American shad)
Pathway
asad04010
MAPK signaling pathway
asad04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121685318 (ret)
04020 Calcium signaling pathway
121685318 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
asad01001
]
121685318 (ret)
Enzymes [BR:
asad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121685318 (ret)
Protein kinases [BR:
asad01001
]
Receptor tyrosine kinases (RTK)
RET family
121685318 (ret)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD4
RET_CLD1
RET_CRD
Cadherin
Cadherin_FAT4_N
Pkinase_fungal
RIO1
ABC1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
121685318
NCBI-ProteinID:
XP_041921708
LinkDB
All DBs
Position
16:28186430..28215215
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AA seq
1110 aa
AA seq
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METTRGIFWGEIVLVLLSVCKVSTGLHFPLNVYTENIYIGQPAGSPVLQVHSMRDTDSER
PHFYLCWQNPNRPPHYASWFHMDESSGMISMNKTLEWSDFAFYPMGSFKKLSLKAFVAYE
PVQRVSCYLRPTVEISLILINTTAPPCDQIKLESLCFPDKEVTPHITENRLPGPLYKLRR
LARSHLCPNYTISYGLDADDPIPFEVDDTTSELLVTRPVDREEREVYRMQVVCMVETNET
IHKLFLPMHVNVYDENDNAPYINGTDTGDVVVEFNRMKGAVFGNLTVYDRDTTPVYPKDH
IQNKLTGTMLTNDTWIKNTFSVAHSLREEKAMFGNVRGTVHEYKLTLARDLSVTENRSFQ
LDYLLTDRTFTGGNGSVILHFNVSILPVPIRFTNISYVFNISRKSTVYSKIGKVCVDNCQ
KFQGIDVEYQLEIVDRNASVDLQPCYAAVGIVRSLREVSGVLFVNDTEVFRRPECQELQY
VVVAQEQQLQLQARTQLIVIFEEESDKLDSSEQRILSCAEKKKQGECEAFRGLGTPTGRC
QWRQSTEKGISQNYSTCSPDLRTCPDGFCDAVESKDIIICPQDCTREIVGGHEKGLMFGI
KAGYGTCYCYSERCFCEKDPIEEAMCDDVCKTIIATAVLLSFVLSILLSSYFIHRYHKST
PKPPIASAEMTFRRPAQSYPISYSANNVRRGSLDSMENQVAIDTFKIPEDPKWEFPRKNL
VLGKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKENASHSELRDLLSEFTLLKQVNH
PHVIKMYGACSQDGPLYLIVEYAKYGSLRNFLRESRKVGPSYMGNDANRNSSYLENPDER
ALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDS
YVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIMTLGGNPYPGIAPERLFNLL
KTGYRMEKPENCSEEMYNLMLRCWKQESDKRPTFSEISKELEKMMVKSRDYLDLAASTPA
DALLYDDALSEEDTPLVDCNNAPLPRNLPSTWIENKLYGMSYPNWPEGSPVQLNRLDGTN
PVFSRYANDSVYANWMALPTSAKIVDKLDS
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaacgcgtggcatattttggggagaaatcgtactggtactcctttctgtctgt
aaagtttccacaggtctgcactttccactgaatgtctacactgagaacatttacatcggg
cagcctgcagggtcgcccgtgcttcaggtccactccatgcgggacacggactcggagagg
ccgcacttctacctgtgctggcagaatcccaacaggcccccacactacgcgtcctggttc
cacatggacgagtcctcgggcatgatcagcatgaacaaaacactggagtggagcgacttc
gctttttaccccatgggatccttcaagaagctcagcctaaaggcttttgtcgcctacgag
ccagtgcagagagtcagctgctaccttcggccaaccgtggagatcagcctcatcctcatc
aataccacagcgcccccttgtgaccagatcaagctggagtcactctgtttccctgacaag
gaagtgactcctcacatcacagagaaccgtctgccggggcctctgtacaagctgaggagg
ctggccaggtcccacctgtgcccaaattacaccatcagctacggacttgatgcagacgac
cctattccgtttgaggtggacgacaccacctctgagctgctggtgacccggccggtggac
agggaggagcgggaggtgtaccgcatgcaggtggtgtgcatggtggagaccaacgagacc
atacacaaactcttcctcccaatgcacgtgaacgtctacgatgagaacgacaacgcaccg
tacataaacggcacggacaccggggacgtggtggtggagttcaatcgaatgaaaggagcc
gtttttggcaacttgactgtttacgacagagacaccacgcccgtctaccccaaagatcat
attcagaacaaacttacaggcaccatgctcacaaacgacacctggatcaaaaacacgttc
tctgtggcccattccctcagagaggaaaaggccatgtttggcaatgtgcggggcaccgtc
catgagtacaagctgacccttgccagggacctgtctgtcacggagaatagatccttccag
ttggattatctgttgacggacaggacatttactggtgggaatgggagcgtaatactacac
ttcaacgtgtccatcctgcctgtgcccattcgcttcaccaacatcagctatgtgttcaac
atctcaagaaaatccactgtttactcaaagatcggtaaggtgtgtgtggacaactgccag
aaatttcagggcattgatgtggaataccagctggagattgtggacaggaatgcgtctgtg
gacctgcagccatgctacgcagcagtgggcattgtccgcagtctgagggaagtttcgggg
gtgctgtttgtgaacgacactgaggtgtttcgccggccagaatgccaggagcttcagtat
gttgtggttgcccaagagcagcaactgcaactacaggccaggacccagctgattgtcatc
tttgaagaagaatcagataagctggactcttcggagcagcgtattctgtcatgtgcggaa
aagaagaaacaaggggaatgtgaggcattccggggattgggaacgccgactgggagatgc
cagtggagacaaagcacagagaaaggcatatcccagaattactccacctgttctcccgat
ctgcggacgtgtccagatgggttctgtgatgcagtggagagtaaagacataatcatatgc
cctcaggactgcacaagagaaattgttggtggccatgagaaagggctgatgtttggaatc
aaagctggctatggaacctgctactgctattccgagcggtgcttctgcgaaaaggatcct
atagaggaggccatgtgtgatgacgtctgcaagaccatcatcgccacggccgtgctcctc
tccttcgtcctctccatcctcctctcctcctacttcatccatcgctaccacaagagcacg
cccaaaccgcccattgcctccgccgagatgaccttccgccggcccgcccagtcctacccc
atcagctactcggccaataacgtgcggcgaggctctctggactcaatggagaaccaggtg
gccatcgacacgttcaaaataccggaggatccaaaatgggagttccctcgtaagaatttg
gtgctgggtaagactctcggggaaggagagtttgggaaggtggtgaaagcaacagccttc
cgactgaaggggaaagctggatacacgactgttgctgttaaaatgttgaaagaaaatgcc
tctcacagtgaactgcgtgaccttttgtctgagttcaccctgttgaagcaggtcaaccat
ccacatgtcataaagatgtacggtgcttgcagccaagatggtcctctgtatttgattgtg
gagtatgccaagtatgggtccctgcgtaacttcttgcgagagagccgtaaggtgggcccc
agctacatgggcaacgatgccaatcgtaactccagttacttggaaaacccagacgagagg
gcacttaccatgggcgacctgatctcctttgcctggcagatttcgagaggcatgcagtac
ctggcagaaatgaagctggtgcacagggaccttgccgcaagaaatgttttggtggcagag
gggcggaagatgaagatttcagactttggtctgtcacgagacgtgtatgaggaagactcc
tatgttaagagaagcaagggtcgcattcccgtcaaatggatggccatagagtcactgttt
gatcatatttacacaacccaaagtgatgtctggtcgtttggtgtgctcctgtgggagatt
atgactctgggaggaaatccttatccaggcattgcacccgagcgtctctttaaccttctg
aagacaggctaccgcatggagaaaccagaaaactgctctgaagaaatgtacaatctgatg
ctccgatgctggaaacaggaatcagacaaacgaccaacattctcagagatcagcaaggag
ttggagaagatgatggtgaagagccgagattacctagacctggcggcatccacgccggct
gacgcgctcctgtacgacgacgcactctccgaggaggatacaccactagtggactgtaat
aacgcccctctccctcgaaacctcccttccacttggattgaaaacaagctctatggcatg
tcataccccaactggccagaggggagcccggtacagctcaacagacttgatggcactaac
cctgtcttttcaagatatgcgaatgatagtgtttatgcaaactggatggctttgcctacg
tctgcaaaaattgtggacaagcttgacagttaa
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