Alosa sapidissima (American shad): 121694652
Help
Entry
121694652 CDS
T11137
Symbol
kdrl
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04010
MAPK signaling pathway
asad04020
Calcium signaling pathway
asad04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121694652 (kdrl)
04020 Calcium signaling pathway
121694652 (kdrl)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121694652 (kdrl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
asad01001
]
121694652 (kdrl)
Enzymes [BR:
asad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121694652 (kdrl)
Protein kinases [BR:
asad01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
121694652 (kdrl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Ig_VEGFR-1-like_5th
Pkinase
Ig_2
ig
VEGFR-2_TMD
VEGFR-1-like_Ig-like
V-set
VEGFR1-3_N_Ig-like
Izumo-Ig
C2-set_2
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
121694652
NCBI-ProteinID:
XP_041930812
LinkDB
All DBs
Position
20:3607988..3653132
Genome browser
AA seq
1302 aa
AA seq
DB search
MTPIGCAKRSFVLLPCLISLIGLVEGVRELHLMSGNHQHVHHVGDSLTLVCRGSRRLNWT
LPGRDLLSEGVRVEDCSQRKQHCKRLLLHNLTYNDTGYYECSSPRHAKSIYVFVEDHAQP
FMEPFINSPQVLFSYRHDKSVLIPCRTTSPDFNVTLETAPPISEDLKTKVKWDPKEGFTL
PYKTMWDSYFMLTCSTTVSGRTYTSKYIIQRLTKVLKNVKIIRPHRDEPVERLVGEKLVL
NCSGETKSSGRIIFKWQHPNGTLMSGKNFGPEGYEINRIMTSVLTLPSITMQDTGNYTCI
AEVENQKNSTAEVIVYKHPFLKLEHQGPQTNTVQEFNKVMFEPFVHTYPKPKEVEVIWYK
NNVRIPKNATCYHMSRRKLIIKEVKWEHTGLYTVEVKNAASGLTRSLNYSLVVEVKPVIL
EEGVMTKEPRSITQGQPQHLTCTAFGYPMPEVTWFWQPCDPNPDFQECRLLSEPLAVRVQ
MEEDYPHNWVEMIDSKSAELKGVNKTISTLVVAAANVSGVYSCEAINKVGKHKMDTIFYV
NDGSESLEISPDTAIEGSDVTLTCRATRYLYSNAHWYDAFNRTILGIEEQNRLYTSVSIM
VQNVSRNFTEEYHCRALNLFTGKEIQKSAALVINERKIPSLRQNLTEQDVNSSSTLMLTC
LAQGVPQPNITWYRNDLPVVEGQGVSLMAEGVLVIQRVKKEDEGMYECRATNDMGVVASS
AFVRVVGDEGKANIEVIVLVCTGAAATFLWIMLILFIRKLRKPSPADIKAGYLSIIMDPD
HMPLDEQCDRLPYDSNKWEFPRDRLRLGKTLGHGAFGKVVEASAFGIDKLSTCKTVAVKM
LKGGATNNEWKALMSELKILIHIGHHLNVVNLLGACTKPGGPLMIIVEFCKYGNLSNYLR
SKRADFVVYKSQDGKALPSGSGCDLSELIKRRLESVASTGSSASSGFIEDKSYCDSEEEE
EESEDLYKRVLTMEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGL
ARDVYKDPDYVRKGDARLPLKWMAPEAIFDKIYTTQSDVWSFGVLMWEIFSLGASPYPGV
QIDEEFCCRLKEGTRMKAPEYSSSEIYQTMLDCWQGNPVERPTFTELVETLGDLLQASVQ
QEGKHYIPINTALLTKEAKPSSPAPTEESSSRPLSQRDSGTWNIKIRPASVKTFDEVTME
NGTNDIHEGGQSDSGMGLSSDSMKTLKRLESLARPLSIMALAMKTVSKSKESVLTEGDRE
MYQAPVPSLDFSLEDSSLDPELERHSPPPDYNSVVRYSTPPV
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgacccccatcggctgcgccaaacggtcattcgttcttcttccctgtttaatatccctt
attgggctggtggagggggtgcgggagctgcatctgatgtcaggaaaccatcagcatgta
catcatgtgggagactccctcacactcgtctgcaggggttcacggaggctgaactggacc
ctccccggcagagacctgctctctgagggagtccgtgtggaagactgctcccagaggaag
cagcactgcaagaggctgctcctgcacaacctcacatacaatgacactggctattatgaa
tgcagctcacccagacacgcaaaatccatttatgtgtttgtcgaagatcacgctcaacct
ttcatggaacccttcataaacagtccacaggtgctgttctcctacagacatgacaagtct
gtcctaataccctgcagaacaacatcacctgactttaatgtcaccctggagactgcccca
cctatctcagaagatctcaaaacaaaggtgaaatgggatcctaaggaaggttttactctt
ccgtacaaaaccatgtgggactcctattttatgctgacatgctcaaccactgtcagtggc
aggacatacacgtccaagtacattattcaaagattaactaaagtactgaagaatgtgaag
atcatccgcccacatcgtgatgaacctgtggagcgtctagtcggggagaaactagtcctt
aattgctcaggagagaccaagtcgtctggcagaatcatatttaaatggcaacaccccaat
ggtactcttatgtctggcaaaaacttcggacccgaaggctatgaaatcaatcgcataatg
actagtgtactcactttacccagcataacaatgcaggacacggggaattacacgtgcatc
gccgaggttgagaaccaaaagaacagcacggcagaggtcatcgtctacaagcatccattt
ttgaaactggaacaccaaggtcctcaaaccaatacagttcaggaatttaacaaagtgatg
tttgaaccttttgtccatacttatccaaaacccaaagaagttgaagtgatttggtataag
aataatgtgcgcatcccgaagaatgccacatgctatcatatgtcgcgccgcaagctcatc
atcaaagaagtgaagtgggaacatacggggctctacaccgtggaggtgaagaacgcagcc
agcggcctgacccgcagtctcaactacagcctggtggtggaggtgaagccggtgattctt
gaggagggcgtgatgaccaaggagccgcgctccatcacccaaggccagcctcagcacctc
acctgcactgcatttggctaccccatgccagaggtcacctggttctggcagccctgcgac
cccaatccagactttcaagagtgcagactgctgagtgaacccttagcagtgcgggttcaa
atggaagaggactacccacacaactgggttgagatgatcgacagcaagtccgcagagttg
aagggtgtaaacaagaccattagcaccctggtggtggcagcagccaatgtgtcaggcgtt
tattcctgtgaagccatcaacaaagttggcaaacacaaaatggacacaattttctacgtc
aatgatggttcagagtcgttagaaatatctcccgacacagccattgaggggtctgacgtc
acactgacttgtcgggctacacgatacctctacagtaacgcgcactggtatgatgcattc
aaccgaaccatcctgggaatagaagaacaaaacaggctgtacacctctgtgtccatcatg
gtgcagaatgtgtccagaaacttcacagaggagtaccactgcagggccctcaacctcttc
acagggaaagagatccagaaatctgctgcacttgttatcaatgagaggaagatcccatcc
ctgagacagaacctgaccgaacaggatgtgaacagcagcagcactctgatgctgacctgc
ctcgcccagggcgttccacagcccaacatcacatggtacagaaatgaccttccggtggtt
gaaggacaaggggtcagcctgatggctgagggggtcttagtcatccagcgggtgaagaag
gaggatgagggcatgtatgagtgccgcgccaccaatgatatgggagtggtggcgtccagt
gccttcgtccgggttgttggagatgagggcaaagccaacattgaagtcatagtgctggtg
tgcaccggcgcagcagccaccttcctctggatcatgctgatcctcttcatccgcaaactc
agaaagcccagccctgcggacatcaaagctggttacctgtccatcatcatggaccctgac
cacatgcctctggacgagcagtgtgaccgcctcccatacgatagcaacaagtgggagttt
ccccgagaccgcctccgacttggtaaaactctggggcacggggccttcgggaaggtggtg
gaggcctctgcctttgggattgataagctgtcgacatgcaagacggtagcggtaaaaatg
ctcaaaggcggagccacgaataatgagtggaaagcgctcatgtctgagctgaaaatactg
attcacatcggccatcacctcaacgtggtcaacctactgggagcctgcaccaagcctgga
gggcccctaatgattattgtggagttctgcaagtatggcaatctgtccaactacctaagg
agcaagcgggctgactttgtggtttataagagtcaggatggcaaggctctgccctcgggc
tccggctgtgacctgagcgagctcatcaagcgccgtctggagagcgtggccagcaccgga
agctccgccagctccggcttcatcgaagataagagctactgcgattcggaggaagaggag
gaagaatctgaggacttgtataagcgggttctgaccatggaggacttgatttgttacagc
ttccaagtggcgaaaggcatggagttcttggcatcgcgaaaatgcatccatcgtgacttg
gctgccagaaacattttgttgtctgaaaacaatgtggtgaagatatgtgattttggcctt
gcaagagacgtctataaagaccctgattacgtgcgcaaaggagatgccagacttcccctg
aagtggatggcaccagaggccatttttgacaagatctacactacgcagagtgatgtgtgg
tcattcggcgttctcatgtgggagatcttctcgctgggtgcgtccccatatcctggcgta
caaattgatgaagagttctgctgccgactgaaggagggcaccaggatgaaggcacctgaa
tactcctcctcagagatataccagaccatgctggactgctggcaggggaaccctgtggaa
agacccacattcacagagctggtggagacactcggggaccttctgcaggccagtgtgcaa
caggaagggaagcattacatccccatcaacacggccctgctgaccaaagaggccaagccc
tccagccctgcaccgacagaggagtcctccagccggccactctcccagagggactcgggc
acatggaacattaagatccgacccgctagcgtgaagaccttcgatgaggtaaccatggag
aatgggacaaatgatatccatgaggggggacagtcagatagtggaatgggcctgtcctca
gatagtatgaagacactgaagcgcttggagtccctggccaggcccttgagcatcatggct
ctggcaatgaaaactgtgagcaagagtaaggagtccgtcctaaccgaaggggacagggag
atgtaccaggcacccgtcccctcgctggacttcagcctggaggactcgtccctggaccct
gagctggagcgccacagcccccctccagactataactccgtggtccgctactcaaccccg
cctgtctag
DBGET
integrated database retrieval system
