Alosa sapidissima (American shad): 121695028
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Entry
121695028 CDS
T11137
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04120
Ubiquitin mediated proteolysis
asad04210
Apoptosis
asad04217
Necroptosis
asad04510
Focal adhesion
asad04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121695028
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121695028
04217 Necroptosis
121695028
09144 Cellular community - eukaryotes
04510 Focal adhesion
121695028
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121695028
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asad01002
]
121695028
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asad04121
]
121695028
03029 Mitochondrial biogenesis [BR:
asad03029
]
121695028
Enzymes [BR:
asad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121695028
Peptidases and inhibitors [BR:
asad01002
]
Peptidase inhibitors
Family I32: IAP family
121695028
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121695028
Mitochondrial biogenesis [BR:
asad03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121695028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
UBA_BIRC2-3
Prok-RING_4
UBA
Motif
Other DBs
NCBI-GeneID:
121695028
NCBI-ProteinID:
XP_041931464
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All DBs
Position
20:6486258..6512733
Genome browser
AA seq
493 aa
AA seq
DB search
MCQIVVSLSVYKRWQIRQTLRIATWKPLQICRTMAGNDGELQTDEAMDWSTISARVNSFR
HFPRAKEVSAERLARAGFYFTGESDRVRCFSCQQTVENWSSADTPVNRHLQASPACKFLS
CVHRTGSFGIAPLSNGSVYDEAAEAMEFSLRTGEVVDESTYPMAPHMCAEDARIRSFGTS
WPASAPVRSRRLAQAGLYYLGEADRVQCFCCGGMLAGWEPGDEPWSEHSRHFPNCFFILG
HDVGNVPSAQPPESDGPRVHMESYEERLGSFAGRQHPVDHERLARAGFYSSGASDRVTCF
RCGGGLKNWQPEEDPWEQHAKYYPGCSFLLSEKGHEFVNSIQLQNPSKSNPASSHHQNGF
SKQEKAASIMQSEIAQRVVEMGFDPVKVERAILEKIRRFGQGYSSVENLIQDVLSNSAEN
DPEGSHANDDENPLEKLEKLQREKQCKICMDSDACIVFVPCGHLATCKRCSDSLGKCPIC
CANIIQKIKTYIS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcaaattgtagtgtcactttcggtttacaaacgatggcaaatcagacagacgctc
agaattgccacttggaaacctcttcaaatctgtcgaactatggctggaaacgacggtgag
ctacagacagacgaagcaatggactggtccacaatcagtgcccgtgtcaactcgttccgc
cacttcccccgtgctaaggaagtgtctgcggagcgtttggccagggctggcttctacttc
accggtgagtcagaccgtgtacgctgcttcagctgccagcaaacggtggagaactggagc
agtgctgacacgcccgtgaaccgtcacctgcaggcgtcgcctgcctgcaaattcctcagt
tgcgtgcaccgcactggcagctttggcattgccccgctgagcaacggctccgtgtacgat
gaggcagccgaggccatggagttcagcctgcgcaccggtgaggtggtggatgagtccacg
taccccatggcgccccacatgtgcgcagaagatgcgcgcatcagaagcttcggtacatcg
tggcctgcctctgccccggtacgctctcggcggctggcccaggccgggctgtactatctc
ggggaggccgaccgggtccagtgcttctgctgtgggggcatgctggccggctgggagccc
ggggatgaaccctggagcgaacactcccgccacttccccaactgtttcttcatcctgggc
catgatgttggcaatgtcccctccgcccagcctccagagagtgatggcccacgggtccat
atggagtcctatgaggaaaggctggggagttttgctggcaggcagcatcctgtggaccat
gagaggttggccagagcagggttctacagctcaggtgcgtcagaccgtgtcacatgtttc
cggtgtgggggaggtctgaaaaactggcaaccagaggaagatccatgggagcaacatgcc
aagtactatcctgggtgcagttttctgctgtcagaaaagggtcatgagtttgtcaacagc
atacaacttcaaaacccaagcaagagcaatccggcttcaagtcatcaccagaatggattt
tcaaagcaggagaaagcagcaagcatcatgcagtctgagattgcccagagagttgttgag
atgggttttgatccagtcaaggtagagagggccattctggagaaaatacgtcggtttgga
cagggctactccagcgttgagaatcttatacaggatgtgctcagcaactcggctgaaaat
gatcctgagggctcccatgcaaatgatgatgagaatcctttggagaagctggaaaagcta
cagagagaaaaacaatgtaaaatctgcatggacagtgacgcttgcatcgtatttgtaccc
tgcggacacttggccacctgcaagaggtgctcagattccctaggcaaatgtcccatttgt
tgtgcgaatatcatacaaaaaattaagacctacatctcctaa
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