Alosa sapidissima (American shad): 121696845
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Entry
121696845 CDS
T11137
Symbol
lemd3
Name
(RefSeq) inner nuclear membrane protein Man1
KO
K19410
inner nuclear membrane protein Man1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121696845 (lemd3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121696845 (lemd3)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
121696845 (lemd3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MSC
LEM
RBM39linker
Motif
Other DBs
NCBI-GeneID:
121696845
NCBI-ProteinID:
XP_041933822
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Position
22:27153764..27162448
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AA seq
892 aa
AA seq
DB search
MASAQLTDEELFSELKRFGFFPGPISENTRPVYLKKLKKLREEQQQRGSRFGKTRNSGSI
NNNSGGSGNSSNTAAGASRPKARPASNDVTHLSTSRSPGGRPTLNEKRTSGGGKFVLGFS
SDESDAEVSQKKQGPNHSSSRRDRGSGSQRQQTRPTGTPTGVRRSPGVSVNNSSPALLDS
LRGATGSSWWGDRDKSLTARTETDGRAYGEVDEDDEYEEETERDTRALNGSRASYTLHTS
KLPGDYSDSDEEKEEGGTEKERQRERRLTSSRSHTKATHSPYKTFRGSLSGQGKMAVGIR
VNDTSDASSLDRARGEEDDDETTGVGESSLSSGLLNRHRPRRSVYASGIMDESIGEGSNS
SPSRYLKNHIDSGDGATTSSRFSIGFKHRYSPHNSLSGTYRPNHSNHTGSNHAYSQPTHK
QKLSVPEDELLQQFKREEVSTTGGFSAHYLSMFLLIAACLFFVLLGLMYLRMRGSGASDG
DVVIRNHPFGTAFDESYTNKEKDLILKLLLHLHDHLASVAGEYDCGDQKAVLNRSLTMSD
AKEYLKLQNAAYDGLVETALEWIIRTGEDVGIRLIPGASEEAVTDVSEISRLESTHPKMT
FLCRFRRAFFTVILRVLLILAGIGIVWGLLSYMKYRWRREEEETRQMYDMVERIIDVLRS
HSEACQENKDLLPYLPIPHVRDSLVQPQERKKMKKVWDRSVKFLAANESRIRTETQRVEG
ADREVWRWLQPPLSCDKMSIMPSKQWQGKAFPLDKRNSPPNSLTPCLKIRNMFDPVMEVG
ENWHLAIHEAILEKCSDNDGIVHIAVDKNSREGCVYVKCLSAEHSGKAFKALHGSWFDGK
LVTVKYLRLDRYHQRFPQAVGCTTPLKPSSSHMDTMSGLRHRTSSANSLSFS
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcacagttaacggatgaggagcttttctctgagttaaagcgctttggattc
ttcccaggtccgatctcggagaatacacggcccgtttacctgaaaaaacttaagaaacta
cgtgaagagcaacaacagcgtggatctagattcgggaaaacgcgaaacagcggcagcatc
aacaacaacagcggtggcagtggtaatagcagcaacacagcggcgggagcttcgagaccc
aaagccaggccagccagcaatgacgtcacgcacctgagcacaagccggagccccggcggg
cgcccgaccctgaacgaaaagcgtacaagcgggggtgggaagttcgttttgggatttagc
tccgatgaatcggatgccgaggtctctcagaaaaagcaaggcccaaaccatagcagtagt
aggagagaccgaggctccggctcgcagcgccagcagacaaggcctacaggaacacccact
ggcgttcgcagaagcccaggagtcagtgtgaacaactcctcgcccgcgctcctagatagt
ctgagaggcgccaccggatcttcttggtggggcgatcgagacaaatccttaaccgcacgc
actgagacagacggtagggcttacggtgaagtcgatgaagacgacgaatacgaggaggag
actgagagggacactcgggctctgaacggcagcagggcgtcttatacgttgcataccagc
aagcttcccggggattactcggattcggatgaagagaaagaggaggggggcacggagaaa
gagcgtcagcgagaacgccgactgacttcctcgcgaagtcatacgaaagccacacattct
ccttacaaaactttcagaggctctctaagcggtcagggaaaaatggcagtcggaattcga
gtaaatgacacttcagacgctagcagtctagacagggcgcggggggaggaggacgacgac
gaaaccacgggcgttggagagtcttccctgagcagtggcctgctcaaccgccaccgtccc
agaaggtctgtgtacgcctcaggaatcatggacgaaagcataggggagggaagtaacagt
agtccatccagatatctcaaaaatcatattgatagcggagatggggcaactaccagcagc
agatttagtatcgggttcaaacataggtattcccctcacaacagcctctcgggcacctac
cggcccaaccattcgaatcacacgggctcgaaccatgcatacagccagccgacccacaaa
cagaagctatctgttccggaagacgagcttctgcagcaatttaaaagggaagaggtttca
acaactggaggtttcagtgctcactacctttccatgtttcttctgattgctgcctgtctg
tttttcgtgctgcttggcctcatgtacctgcgcatgagagggtctggcgcttcagatggg
gatgttgtcattcggaaccacccgtttggcacagcatttgatgaaagttataccaacaaa
gaaaaagacctaatcctcaaactactgcttcatttacatgatcaccttgccagtgttgca
ggtgaatatgactgtggagaccagaaggctgtgttaaacagaagcttgaccatgagcgat
gctaaagaatatttaaagcttcaaaatgcagcctatgatggcctcgtagaaactgctttg
gaatggatcattcggactggagaggatgttggcatacggttgatcccaggcgcctcggag
gaggcggtgacggacgtgtccgagataagccgtctggagtccacgcaccccaagatgacc
ttcctgtgccgcttccggagggccttcttcacggtcatcctccgagtgctcctcatcctt
gcaggcattgggattgtttggggcctgctgagctacatgaagtaccgttggaggagagag
gaggaggagaccaggcagatgtacgacatggtggagagaatcatagacgttctccggagc
cacagtgaggcttgtcaggagaataaagacctactgccctacctgcccatcccacatgtg
cgagactcactggttcagcctcaagagaggaagaagatgaagaaggtgtgggaccgatcc
gtgaagttcctggcggccaatgagtcgcgcatccgcaccgagacccagagggtagaggga
gctgaccgcgaggtctggcgctggctgcagccccctctgtcctgcgacaagatgtccata
atgccctccaaacagtggcaaggcaaagcattcccactggacaagaggaactctccaccc
aacagtttaacgccatgtctgaagatccgcaacatgtttgaccctgttatggaggttgga
gagaactggcacctggccatccacgaagccattcttgagaaatgcagcgacaacgacggg
attgtgcacatcgccgttgacaaaaattcccgagagggctgcgtctatgtgaagtgcctc
tcagcagagcactcgggcaaggctttcaaggcgctgcatggctcatggtttgacggtaag
ctggtgacggtgaagtacctgcggctcgaccgctaccaccagcgcttcccacaggcggtg
ggctgcaccacgccgctcaagccctccagcagccacatggacaccatgtccggcctccgc
caccgcaccagctccgccaactccctcagcttctcctga
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