Alosa sapidissima (American shad): 121696914
Help
Entry
121696914 CDS
T11137
Symbol
casp20
Name
(RefSeq) caspase 20, apoptosis-related cysteine peptidase
KO
K04398
caspase 8 [EC:
3.4.22.61
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04115
p53 signaling pathway
asad04210
Apoptosis
asad04217
Necroptosis
asad04620
Toll-like receptor signaling pathway
asad04621
NOD-like receptor signaling pathway
asad04622
RIG-I-like receptor signaling pathway
asad04623
Cytosolic DNA-sensing pathway
asad04625
C-type lectin receptor signaling pathway
asad05132
Salmonella infection
asad05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121696914 (casp20)
04217 Necroptosis
121696914 (casp20)
04115 p53 signaling pathway
121696914 (casp20)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121696914 (casp20)
04621 NOD-like receptor signaling pathway
121696914 (casp20)
04622 RIG-I-like receptor signaling pathway
121696914 (casp20)
04623 Cytosolic DNA-sensing pathway
121696914 (casp20)
04625 C-type lectin receptor signaling pathway
121696914 (casp20)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121696914 (casp20)
09171 Infectious disease: bacterial
05132 Salmonella infection
121696914 (casp20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asad01002
]
121696914 (casp20)
Enzymes [BR:
asad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.61 caspase-8
121696914 (casp20)
Peptidases and inhibitors [BR:
asad01002
]
Cysteine peptidases
Family C14: caspase family
121696914 (casp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C14
CARD
Motif
Other DBs
NCBI-GeneID:
121696914
NCBI-ProteinID:
XP_041933969
LinkDB
All DBs
Position
22:13924696..13927898
Genome browser
AA seq
366 aa
AA seq
DB search
MDSIRSKKTTLIDILSTDASFILQHVQRENLITGREYKNLYSMSQDGEKTTIELLDKMMN
KGDDHCKRFISMLRESEIVGTFPALKELLNPQENVPHQEIAQAATDNPDNNSDSAYKMVN
NPRGLCIIINNVNFQKLSTRNGSSEDADALEQVFTWLNFKVECHKDLTKDKMKSVVQEGS
QRADGDCFVCCVMSHGETNGVLGCDSEVVTVEEMITPLKGNNCPRLAGKPKLFFIQACRG
RLFQNEARIQADSSREDNQGLEMDAYPGEIISIPADADFLVSMATVNEYFSFRNSKTGSW
FIQSLCKRLREGILRGDDILTILTYVNDDVSREEGLIRGKRAKQVPDQSFRLRKRLFFPV
PDSPDL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggattccattcgttcaaaaaaaacaactctgatagatattctctccactgatgccagt
tttattttgcaacatgttcagagggaaaatctcattactggacgggagtacaagaatctt
tatagcatgtctcaagatggagagaagactaccatcgaactgttagacaaaatgatgaac
aagggtgacgaccactgcaaaaggtttatttctatgttgagagaaagtgaaattgttggc
actttcccagcactgaaagagctccttaaccctcaggaaaatgtccctcatcaggaaatt
gctcaggccgcaacagataatccagacaacaactcggatagtgcatataagatggtcaac
aatcctcgtggcctctgcataatcatcaataatgtgaactttcaaaaattatcaacacga
aatggatctagtgaagatgcagatgctttggagcaagtcttcacttggctgaattttaaa
gtggaatgccacaaagacctgaccaaagacaaaatgaagtctgttgtacaagagggcagt
cagagggctgatggagattgctttgtctgctgtgtcatgagtcatggcgaaacaaatggt
gtgttgggatgtgacagtgaagttgttaccgtagaagagatgatcacccccttgaaagga
aacaactgcccaaggctagctggaaagcctaaactgttcttcatccaggcttgtcgaggg
cgtctttttcagaatgaagcgaggatccaagctgacagctctcgtgaagacaaccagggt
ttggagatggatgcttaccccggggaaattatctctatcccagcagatgctgattttctt
gtctccatggctactgtgaatgagtacttctctttcagaaacagcaaaacaggctcatgg
tttatccaatctctatgcaagcgactcagagaaggcatactcaggggggatgacatcttg
actattctcacctatgtcaacgacgatgtcagccgggaagaagggctcatcagaggaaag
agagccaaacaggtcccagaccagtccttcagactccggaaacgtctttttttcccagtg
cctgacagtcctgatctgtaa
DBGET
integrated database retrieval system
