Alosa sapidissima (American shad): 121696976 Help Entry 121696976         CDS       T11137                                  Name (RefSeq) filamin-C-like isoform X1   KO K27393   filamin-C Organism asad  Alosa sapidissima (American shad) Pathway asad04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:asad00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     121696976  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:asad04812]     121696976 Cytoskeleton proteins [BR:asad04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      121696976   Intermediate filaments    Intermediate filament-binding proteins     121696976 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Filamin Ig_GEX2_N CH Big_3_5 CarboxypepD_reg PapC_N CH_2 Motif Other DBs NCBI-GeneID:  121696976 NCBI-ProteinID:  XP_041934128 LinkDB All DBs Position 22:11791951..11901116 Genome browser AA seq 2779 aa AA seqDB search MMSNNTYYDQQQPPQYYYGTDNGEDGDEEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLK CINKRINDLQKDLSDGLKLIGLLEVLSQKHMYRKYHARPNFRQMKLENVSVALEFLEREH IKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDEDEEDARKLTPKQRLLGWIQN KVPQLPITNFHRDWRDGKALGALVDNCAPGLCPDWELWDPNQPVENAREAMQQADDWLGV PQVIAPEEIVDPNVDEHSVMTYLSQFPKAKLKPGAPIRPKTLHPTRARAYGPGIEPRGNM VLKPAEFMVETVEAGLGEVLVYVEDPERHTEEARVIPNNDKNRTYSVVYVPKVEGLHKVK VLFAGQDIDRSPFMVHVSKALGDPNKVQARGPGLEAMGNMANKPTYFDIYTAGAGAGDVG VIIVDCQGRRDTVEIILENKGDSVFRCTYIPVLEGPHTIYVTFAGQQIPRSPFSVTISEA PASTRSPGSPVQIIPQSIRTPPGSDKARRVPPPTPPKPRRPTSNPNACRASGRGLQPKGM RVKEVADFKVYTKGAGSGDLRVGVKGPKGNDEPVKGEEAGGGVYEYDYYPIFPGKYIISI TWGGQPIPRSPFEVWVSEEAGAQKVRAWGPGLETGMVGKSADFVVEAIGTEVGTLGFSIE GPSQAKIECDDKGDGSCDMRYWPTEAGDYAVHVICDDEDIKDSPFIAHILPAANDVFPEK VVCSGPGLEPTGCIVNKPAEFTIDAQAAGNGQLRIYAQDAEGFPIDIQITDNGDSTYFCV YVPTKAIKHTIIITWGEVNVPNSPFRVTIGEGSHPENVKVYGPGVEKSGLKANEPTYFTV DCSEAGQGDVSIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYTPPGAGRYTIMVLFAD QEIPISPFRIKVDPSHDAAKVKAEGPGLSKTGVEVGKPTHFTIYTKGAGKATPEVVFAGA AKGEAVSDFEIIDNHDYSYTVRYTAIQQGNMSISVFHGGDPIPKSPFNISVAPPLDLNRV KVQGLNNKVDVGKDQEFTINTRGAGGQGKVDVKITSPSRRPIPCKVESSASNEVHTVKYI PPEEGPYKVDISYDGNPVPGSPFAVEGVMPPDPSKVRAYGPGLKGGIVGKPAPFAIDTKG AGTGGLGLTVEGPCEAKIECQDNGDGSCSVSYLPTEPGEYSINILFADQHIPGSPFKAIV QSMFDPSKVTASGPGLERGKVNEAASFTVDCSKAGEAELTIEIISDAGAPAEVRVQNNSD GTYSITYIPPFHGMYTITIKYGGHAVPKFPARVQVDPSIDTSTIKVYGPGVEPRGVLREV TTHFVVDARAVSKAGGNHIKARIVNPSGANTDAFISDKGDGTYRVEYTAYEDGMHLIEVL YEDVAVPKSPFRVSVTEGCDPSRVRAYGPGLEEGLVNKPNLFTVETRGAGTGGLGLAIEG PSEAKMSCKDNKDGSCSVEYIPFTAGDYDVNITFGGLPIPGSLFRVPVRELVDPSKVKCS GPGLGSGVRAHVPQTFTVDCSKAGLAPLEVQLYGPTGVAEPVTITDNGDGIHTVNYTPTT DGPYTVCVKYADQEVPRSPFKIKALPAHDASKVRASGPGLNASGVPASLPVEFTIDARDA GEGLLTVQILDPEGKPKKANIRDNRDGTYTVSYVPDMTGRYTITIKYGGDEIPYSPYRIH AVPSGDASKCLVTVSIGGHGLGSGLGPTIQIGEETVITVDAKAAGKGKVTCKVSTPDGAE LDVDVVENADGTFDIYYTAPEPGKYVITIRFGGEHIPNSPFHVVASDTIPIIEEPCDKVQ LQQPYAPYQAYAPHWATEEPITATNGIEPMLRPFNLVIPFTVQKGEITGEVRMPSGKTAR PNITDNKDGTVTVKYAPTEKGLHEMDIKYDGNHIPGSPLQFYVDAINSGHVTAYGPGLSH GMVNKAAIFTIVTKDAGEGGLSLAVEGPSKAEISCKDNKDGTCTVSYLPTAPGDYNIIVK FDDKHIPGSPFTAKITGSDDSLRTSQLNVGTATDVSLKITETDLSSLSASIRAPSGNEEP CLLKRLPNRHIGISFTPKEVGEHVVSVKKNGKHVTNSPFKIMVGQSEIGDASKVKVFGNG LIEGHTFEVAEFILDTRNAGYGGLGLSIEGPSKVDINCEDVEDGTCKVTYCPTEPGTYII NIKFADQHIPGSPFTVKVAGEGRMKESITRKRQAPTIASVGSTCDLNLKIPGNWFQMVSA QERLTRTFTRSSHTYTRTERTEFSKTRAGETKREVRVEESTQVGAEPTPPTFRNVFGGFL GREALGTFSGIQARQPEGESGTQEMTAQVTSPSGQTEDAEIIEGEDSTYSVRFIPHEMGP HTVNVKYRGQHVPGSPFQFTVGPLGEGGAHKVRAGGPGLDRGVAGVPAEFSIWTREAGAG GLSIAVEGPSKAEISFEDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFIVPVATLS DDARRLTVTSLQEMGLKVNQEASFAVQLNGACGVIDAKVHTPSGAVEECYITELDNDKHA IRFIPRENGVHSIDVRFNGNHIPGSPFKIRVGEPGQAGDPGMVSAFGPGLEGGTTGVPSE FIVNTCNAGAGALSVTIDGPSKVKMDCQECPEGYKVIYTPMAPGSYLISIKYGGPQHIVG SPFKAKVTGPRLSGGHSLHETSSVLVETVTKSSAMSGAFSSLPKFSSDASKVVSRGAGLS KAFIGQKNTFTVDCSKAGTNMLMVGVHGPKTPCEEVYVKHMGNRMYNVTYTVKEKGDYIL IVKWGDEMVPGSPFHVTVP NT seq 8340 nt NT seq  +upstreamnt  +downstreamnt atgatgagcaataatacgtactacgaccagcagcagccgccgcagtactactacggtacg gacaacggagaggacggcgacgaggagatgccggccaccgagaaggacctcgcggaagat gcgccctggaagaagatccaacagaacaccttcaccaggtggtgcaacgaacacctgaaa tgcatcaacaagcggatcaacgacctgcagaaagatctaagcgatgggctgaaactcatt gggcttctcgaagttttgagtcaaaagcatatgtacagaaaataccacgcaagacccaac ttcaggcagatgaaactggaaaatgtctcggtagcgctggaatttcttgaaagagaacac atcaagctggtttctatagacagcaaggcgatcgtggacggcaacctgaagctgatcctg ggcctgatatggacgctgatcttgcactactccatctccatgcccatgtgggaggacgag gacgaggaggacgcgcgcaagctcacgcccaagcagcggctactgggctggatccagaac aaggtgccccagctgcccatcaccaacttccaccgcgactggagggacggcaaggccctg ggcgcgctcgtggacaactgtgctccaggtctatgtcctgattgggagctgtgggatccc aaccagccggtggagaatgccagagaggccatgcagcaggccgacgattggctgggagtg ccacaggtgattgcccctgaggagatagtggacccgaacgtggacgagcactctgtgatg acctacctgtcccagttccccaaggccaagctgaaacccggagcgcccatccgcccaaag accctgcaccccacaagggccagagcctatggaccaggcattgagccgcggggcaacatg gtcctaaagccggctgagttcatggtggagactgtagaggcggggctgggggaggtgctg gtgtacgtggaggatccagagagacatacggaggaggccagagtgatccccaacaatgac aagaacaggacctactccgtggtgtatgtgcccaaggtggagggtctccacaaggttaag gtgctcttcgctgggcaggacattgaccgcagccccttcatggtgcacgtgtccaaggct ctgggtgaccccaacaaggttcaggctcgtggtccgggtctagaggctatgggcaacatg gccaacaagcccacgtacttcgacatctacactgctggtgcaggtgctggtgacgtgggg gtgatcattgtggactgccagggccggcgggacacagtggagatcatcctggagaacaag ggggacagcgttttccgttgcacctacatccccgtgctggaggggccacacaccatctac gtgaccttcgccggacagcagataccccgaagccctttctctgtgaccatctccgaggct ccagcgagtacgcggtctcccggctccccggttcagataatcccccagtctattcgcacg ccgcctggctcagacaaggctcggagggtgccgcccccaacgccacccaaacccaggcga ccaaccagcaaccctaacgcgtgcagggcctctgggcgggggctgcagccaaagggcatg cgtgtgaaggaagtggccgacttcaaggtctacaccaagggagcgggcagcggagaccta cgcgtgggcgtcaagggcccgaaagggaacgatgagccggtgaagggagaggaggctgga ggtggtgtgtatgagtacgactactaccccatctttcctgggaaatacatcatcagcatc acctggggcggacaacctattccccgcagtccgtttgaggtgtgggtgagtgaggaggcc ggggcccagaaggtgcgcgcgtggggtccagggctggagacaggcatggtgggcaagtct gccgacttcgtagtggaggccattggcacggaggttggcactctgggcttctccatcgag ggcccgtcccaggcgaagatcgagtgtgacgataagggcgacggctcgtgcgacatgcgc tactggcccacggaggccggtgactacgccgtccacgtcatctgtgacgacgaggacatc aaagacagccccttcatcgcccacatcctccccgcagccaatgacgtcttcccagagaag gtggtctgctcaggtccagggctggagcctactggctgcatcgtcaataaaccggccgag ttcaccatcgatgcccaggcggccggtaacggacagctccgcatctacgctcaggatgca gagggcttccccattgacattcagatcacagataacggggacagcacctacttctgtgtg tatgtccccaccaaagcgatcaaacacactatcatcatcacctggggagaagtcaacgtt cccaacagccccttcagggtgaccatcggagagggcagccacccagagaacgttaaggtg tacggaccgggcgtggagaagagtggactcaaggccaacgagcccacgtacttcactgtg gactgcagcgaggcaggacaaggtgacgtgagcatcgggatcaaatgcgctccaggcgtg gtcggtcctgcggaggcggacatcgactttgacatcatcaaaaacgacaacgacacgttc accgtgaagtacacgccccctggtgctggacgctacaccatcatggtgctgttcgccgac caggagatacccatcagccccttccgcatcaaggtcgacccctcccacgacgccgccaag gtcaaggccgagggcccaggactcagcaagacaggagtggaggttggcaagcccacccac ttcaccatctacaccaagggggcgggcaaggctacgccagaggtggtcttcgctggggcc gccaagggcgaggccgtcagtgacttcgagatcattgacaaccacgactactcctacacc gtgcgctacactgctatacagcagggcaacatgagcatctccgtgttccatggaggggac cccatccccaagagccccttcaacatctccgtggccccaccactggacctgaacagggtc aaagttcagggactcaacaacaaagtggacgtagggaaggatcaggagttcaccattaac acccgcggtgctggcggtcagggcaaagtggacgtcaagatcacctcaccttcacgccgg ccaatcccctgcaaggtggagtccagcgcgtccaatgaggtgcacacagtcaagtacatc ccgcctgaggagggtccctacaaagtggacatcagctacgatggcaacccagtgccaggg agtcccttcgcagtggaaggtgtcatgccccctgacccctcaaaggtgcgtgcgtatggt cctggcctgaagggaggcattgtgggtaagccggcgcccttcgccatcgacacaaagggc gcgggcacgggcgggctgggcctgacggtggagggtccgtgcgaggccaagatcgagtgc caggacaacggcgacggctcgtgctcggtgtcctacctgcccaccgagcctggtgagtac tccatcaacatcctgtttgccgaccagcacatccctggttcgcccttcaaagccatcgtc cagtccatgttcgacccgagcaaggtgacggccagtgggccgggcctggagaggggaaag gtcaacgaggcggcctcgttcaccgtggactgctccaaagccggcgaggcggagctgacc atcgagatcatctcggacgctggggccccggcggaggtccgcgtccagaacaacagcgac gggacgtactccatcacctacatcccacccttccacggcatgtacaccatcaccatcaag tacggtggccacgcagtgccaaagttccccgccagggtgcaggtggaccccagcatcgac accagcaccatcaaggtctacggcccaggagtggagcccagaggagtcctgcgagaagtc acaactcatttcgtcgttgacgcccgtgctgttagcaaggccggcggcaaccatatcaaa gcccgcatcgtgaacccctcaggggctaacacagacgccttcatctccgacaagggagac ggaacctaccgagtggaatacactgcttacgaggacggcatgcacctgatcgaggttctg tacgaggacgtggcggtacccaagagtccgttccgagtgtcggtgacggagggctgcgac ccgagtcgcgtgcgtgcatacgggcccggcctggaagagggtctggtcaacaaacccaac ctcttcaccgtggagaccaggggtgcgggtactggtgggttgggtctggctattgagggt ccgtcggaggcgaagatgtcctgcaaggacaacaaagatggcagctgcagtgtggagtac atccccttcaccgccggcgactacgacgtcaacatcactttcggtggtctgcccatccca ggaagcctgttccgcgtgccggtgagggagctagtggaccccagtaaggtcaagtgttcc ggtccagggctgggcagcggcgtcagagcccacgttccacagaccttcaccgtggactgc agcaaggccggcctcgccccactagaggtgcagctctacgggcccacaggagtggcagaa ccagtgaccattacggacaatggtgacggcatacacacggtcaactacacgccgaccact gacggcccttacaccgtttgtgtcaaatacgcggaccaggaggtgccgcgcagtccgttt aaaatcaaggctctgcccgcccatgacgccagtaaagtccgtgccagcggtccaggtctg aatgcctcaggtgtgccagctagcttacctgtcgagttcaccatcgatgcccgtgacgca ggggagggtctgctcacggtccagattctggacccggagggcaagccaaagaaggccaac atccgtgacaaccgggacgggacgtacacagtatcctacgtaccggacatgaccgggcgc tacaccatcaccatcaaatatggcggagacgagatcccgtactctccgtaccgcatccac gcagtgccctcgggtgacgccagcaagtgcctggtcacagtttccattggaggacatgga ttaggctcaggtctcggacccaccatccagatcggcgaggagacggtgatcaccgtagac gcaaaggctgctgggaagggtaaggtcacctgtaaggtgtcgacacctgacggggcggag ctggatgtggacgtggtggagaatgccgacggaacatttgatatctactacacggcaccg gaaccggggaaatacgtcatcaccatccgcttcggaggggagcacattcccaacagcccc ttccatgtggtggccagtgacaccattcccattatagaggagccgtgtgataaggttcag ctgcagcagccttatgccccctaccaggcctacgcaccacactgggccacggaggagcca atcacggccaccaatgggatcgagcctatgctccgccccttcaacctggtcatccccttc acagtgcagaaaggggagatcacaggtgaagtgcgtatgccttcaggcaagactgcccgt cccaacatcacagacaacaaggacggcacggtcacagtgaaatacgcgcccactgagaag ggcctgcacgagatggacatcaaatacgatggcaaccacataccaggaagtccactgcag ttctacgtggacgccatcaacagtggccatgtgactgcctatgggccaggcctgagccac ggcatggtcaacaaggcggccatctttaccatcgtcaccaaagacgccggggaaggtggt ctgtctctggcggtggagggcccctctaaggcggagatctcctgtaaggataacaaagat ggcacctgcaccgtctcctacctgcctactgcacctggcgactacaacatcatcgtcaaa ttcgatgacaaacacatccccggcagccccttcaccgccaaaatcacaggtagtgacgac tcgctgaggacatcccagctgaacgtcggcacggcgacggacgtgtctctgaagatcaca gagacggacctgagttccttgtcggccagcatccgtgccccatctggcaacgaggagccc tgtctgctcaagaggctgcccaaccgccacatcggcatctccttcacccctaaggaggtg ggtgagcatgtggtgagcgtgaagaagaacggaaagcacgtgaccaacagcccctttaag atcatggtgggccaatcagagatcggcgacgccagcaaggtcaaggtgttcgggaacggg ctcatcgagggacacaccttcgaggtcgctgagttcatcctggacaccaggaacgcaggc tatggcggcctgggtctgtccatcgagggtccaagcaaagtggacatcaactgcgaggat gtggaagacggcacctgcaaggtgacctactgccccaccgagcctgggacctacatcatc aacatcaagtttgctgaccagcacatcccaggcagcccattcacagtaaaagtggcaggg gagggccgcatgaaggagagcatcaccaggaagagacaggccccaaccatcgcctcagtc ggcagcacctgtgatctcaacctgaaaataccaggtaactggtttcagatggtgtcggct caggagcgtctgacgcgcaccttcacgcgcagtagccacacctacacgcgcacggagcgc acggagttcagcaagacgcgggcgggcgagaccaagcgggaggtccgcgtggaggagagc acgcaggtcggggccgagcccacgccacccaccttccgcaacgtcttcgggggcttccta ggacgagaggccctcgggaccttcagtgggatccaagccagacaacctgagggtgagtct ggcacgcaggagatgaccgcgcaggtgacgagtcccagcggtcagacggaggacgcagag atcatcgagggcgaggacagcacctacagcgtgcgcttcatcccccacgagatgggcccc cacaccgtcaacgtcaagtaccgcggtcagcacgtgcccggcagccccttccagttcacc gtcgggccgctcggagagggcggagcccacaaggtccgggccgggggccccgggctcgac aggggcgtggccggagtcccagcggagttcagcatctggactcgcgaggcgggcgccggg ggcctgtccatcgccgtggaggggcccagcaaggcggagatctccttcgaggataggaag gatgggtcctgtggcgtgtcctacgtcgtacaggagcctggtgactacgaggtgtccatt aagttcaacgatgaacacatccccgatagtcccttcatcgttcccgtagcaacactgtcc gatgatgcccgtcgccttacggtcaccagtctgcaggagatggggttgaaggtcaaccag gaggcctccttcgccgtgcagctgaacggggcgtgtggcgtgatcgacgctaaagtgcac acaccctccggagccgtggaggaatgctacatcacagagctggacaatgacaagcatgcg atccgcttcatccctcgagagaacggcgtccactccattgacgtccgcttcaacgggaac cacattcctggcagccccttcaagatccgcgttggggaaccaggacaggccggagaccca ggaatggtgtccgcattcggaccgggcctggagggtggaactacaggcgtgccctctgag ttcatagtgaacacgtgtaacgcgggcgcgggcgcactctcagtgaccatcgacgggccg tccaaggtgaagatggactgtcaggagtgcccggagggctacaaggtcatctacacgccc atggcccctggcagctacctcatctccatcaagtacgggggacctcagcatatcgtgggg agccccttcaaggccaaagtcacaggtcctcgcctgtctggaggacacagtctccatgag acctcctctgttctcgtggaaacggttactaagtcctctgccatgtccggagccttcagt tccctgcccaagttctcctctgacgccagtaaggtggtctccagaggggccggcctctcc aaggccttcatcggacagaagaacaccttcactgtggactgcagcaaagcaggaacgaac atgctgatggtcggggtgcacggtcccaagacgccctgtgaggaggtctacgtcaagcac atggggaacaggatgtacaacgtcacctacaccgtcaaggagaagggcgactacattctc attgtcaagtggggggacgagatggtgcctggcagccccttccatgtcaccgtgccttaa

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