Alosa sapidissima (American shad): 121698127
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Entry
121698127 CDS
T11137
Symbol
raph1b
Name
(RefSeq) ras-associated and pleckstrin homology domains-containing protein 1b isoform X1
KO
K23488
Ras-associated and pleckstrin homology domains-containing protein 1
Organism
asad Alosa sapidissima (American shad)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RA_2
RA
PH
RBD
PI3K_rbd
Motif
Other DBs
NCBI-GeneID:
121698127
NCBI-ProteinID:
XP_041935852
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All DBs
Position
23:24990728..25050876
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AA seq
1697 aa
AA seq
DB search
MEQVSDDELDHAAEEDSDKEDQDLDKMFGAWLGELDKLTQVGPADPSLQSLDDGRPQKIQ
NAPLRQETNLANFSYRFSMYNINEALNQGEPVDLDALMADLCTIENELSTIGKPGSSRAS
STRQKAGGRGVGIAVATTGSGGGGGGGSSGGSTSSSTRASPAGSVRQGRPLASNLSLDDI
TAQLEKASLSMDEAARQTSSTTSSCSSSSSCSSSTTATNATAATRRPSASSLPPQQPPPQ
HRRTGSVGGGSEQGGRSAGHSSRSSASASSMDSLDMEKGPRGGPEKDEAPGAPTSQGTPG
QSSTEPPARIITQHASQRRANGRPARGVSRRHLDFTSQNGEVDLLDLGTHSYLDKETSLI
LKSIAGKPSHLLTKEEQAAKLKAEKIRVALEKIKEAQVKKLVIRVHLSDESSKTMMVDER
QTVRQVLDSLLDKSHCGYSPDWALVETIPELQMERIFEDHENLVENLLNWTRDSQNKLMF
IERIEKYALFKNPQNYLLGRKETSEMADRNKEALLEECFCGSSVCVPEIEGVLWLKDDGK
KSWKKRYFLLRASGIYFVPKGKAKASRDLVCFLQLDHVNVYYGQDYRSKYKAPTDYCLAL
KHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKYGKQLYMNYQEAMKRTEAAYDWASLS
SSSIRSACSSASIPESHSNHSSVTDSGLSDGTSSSHARSQSVVSSIFSEAWKRGTQMEEN
SRRSESSRASSISHTSHTSHSSHSHHQSSHPPPAPHTPQPPPQTPHTPQPHPPAPHTPQP
HPPAPHTPQPHPPAPQVPQPQTVPQPPPVSHMPKPPPTHHIPQPPPAPYVPQPPPVLQSH
QPPPTPHIPQPPPAPHTPQPPPAPHTPQPPPASHLPPAPPAPQAPQPPPAPHVPQPPPAP
QAPQPPPAPPVAPTPPQTPPTAYVPPLPPTPQILQPPPPPLPTLSPAPPVTPVACVPSPP
PPPPPPPPPPPPPPPLPPPPVCSPPPSVSGAPLHHHHSSNPTVFAKYSTITRLQQKDKPL
LPAQVPSPPPQAAKPQPGKDNGAWPPPDTTTTTTPPPPPPPPPPPPPPPASLPTPGSAMA
TLRRGPAAGAAVPHPPPPPLSSLHSNGFPPPPPSPGLPVAHVPPKPSNGFQRFPSPPPPD
LSPSPPPQLLTQSAPPPPPPPPPPPPAPPAPPLPPQQPHAHTTPPPPPPPPPPPPPPASL
QQVFPPSAPPKTFPFQMGRKPPGMVVLPTAVAPGPPPPPPPPPPPGPLASVPAKTQPPPT
LPKQHSIGRAAASSLVKQLASQFPGAAATNHVDSAKAPQSPPTVKAKPKWQRGGVQTKSP
EFPPPPPDNSLGFPPAPGPPPPPPPPPPPPAPGPGPGFGPGLPPPPPAPGPGRGFGPGLP
PPPPAPAPGPGPGFGPGLPPPPPLPPATPPKSGGSPMKKSPTGAAKKPPPTPQRNSSFKA
DSSAEYNEARARLENLVGRQGSGSSGSAAAAAGPPAPPKPGKLNLGHLPPALQAKVGKVV
TDFPSPPPLDNDSSFPPPPMDNDLPPPPPLPADLHGSASRVAVVNPQPQSSSSSSSSGGG
NIWSAGRASLKKTPPPTLARRSNGAIPTAMEVHRPMSPPTSPKGQPNFMEDLHRTLRRKS
GSRQGSFGSSSGGEPAITTTMDDMALPPPPPELLLDQQANGSNGGGYASGNISGYATLRR
GPPPAPPKRDNGTKLTN
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggtgtctgatgatgagttggaccatgctgcggaggaggacagcgataaggag
gaccaggacctggacaagatgttcggggcctggctgggggagctggacaagctgacacag
gttggccctgctgatccgtcattacagagcctggacgatggccggccgcagaagatccag
aacgctcccctcagacaggagactaacctggccaacttctcgtaccgcttctccatgtac
aacatcaacgaggcgctgaaccagggcgagcccgtggacctggacgccctgatggccgac
ctctgcaccatcgagaacgagctgagcaccatcggcaagcccggctcctcacgcgcctcc
tccacgaggcagaaggctggcgggcgcggagtgggcatcgccgtggcgaccacgggcagc
gggggaggaggaggaggcggcagcagcggcggcagcaccagcagcagcacgcgggcgtct
cccgccggctcggtccggcagggccgcccgctagcctccaacctgtcgctggacgacatc
acggcgcagctggagaaggcctcgctcagcatggacgaggcggcgcgccagacgtcctcc
accacctcgtcctgctcctcctcgtcctcctgctcctcgtccaccaccgccaccaatgcc
accgctgccacgcgccggccctcggcctcctcgctgcccccccagcagccgccgccacag
caccgccgcacggggtccgtgggagggggcagcgagcagggcggccgctcggccggacac
tcctcgcgttccagcgcctcggcctccagcatggactcgctggacatggagaagggcccg
cgggggggtccggagaaggacgaggctcccggggcccccacctcacagggcacaccgggc
cagtccagcactgagccacctgcacgaattattacccagcatgcatcacagcgaagggcc
aatggtaggcctgcacggggggtctccagacggcatctggactttacatcccagaacggg
gaggtggatttgttggatctgggcactcactcgtatctggacaaagaaacgtctctgatt
ctgaaaagcattgcaggaaagccctctcacctgctgaccaaggaggagcaagctgccaaa
ctaaaggcagagaagatccgtgtggcactggaaaagatcaaagaggctcaggtgaaaaag
ctggtgatccgggtgcacttgtcggacgagagctccaagaccatgatggtggacgagcgg
cagactgtgcggcaggtgctggacagcctgctggacaagtcgcactgcggatacagccca
gactgggccctggtggagaccataccggagctgcagatggagcgcatcttcgaggaccat
gagaacctggtggagaaccttctgaactggaccagggacagtcagaacaaactcatgttc
atagagcgcattgagaagtacgccctgttcaagaacccccagaactacctgctggggagg
aaggagacatcggagatggctgaccgaaacaaagaggccctgctagaggagtgtttctgc
ggcagctcggtctgtgtccccgagatcgagggtgtgctgtggctaaaggacgatgggaaa
aagtcctggaagaaacgctacttcctgctgcgtgcatccggcatctactttgtgcctaag
ggcaaggccaaggcttccagggatttggtgtgtttcctgcaactggaccatgtgaatgtg
tactacggccaggactaccgcagcaaatacaaggctccgactgactactgcttggccctg
aagcacccccaaattcagaagaaatctcagtacatcaagtacctgtgctgtgatgatgtc
agaaccctccaccaatgggtcaacggaatacgtatcgctaagtacgggaaacagctgtat
atgaactaccaggaggccatgaagcgcacagaggcggcgtacgactgggcctccctgtcc
agctccagtatcagatcagcctgcagctccgccagcatcccagaatcgcactcaaaccac
tcaagtgtgacagacagcggcctgtctgacggcacttcgtccagccatgcccgctcccag
agcgtggtcagctccatcttctccgaggcctggaagagaggcacccagatggaggagaac
agccggaggtccgagtcgagccgagcgtccagcatctcccacacctctcacacatcccac
agctctcactcccaccaccagagttcacaccctccacctgccccccacacaccccagccc
cctccgcaaaccccccacacaccccagccccatccacctgccccccacacaccccagccc
catccacccgccccccacacaccccagccccatccacctgcccctcaggtgccccaacct
cagactgtgccccagccgccacccgtctcccacatgcccaaaccaccacctacccatcac
attcctcaacctccacctgccccctacgtgccccaaccaccacctgtgctccaaagccat
cagcctccacctaccccacacatccctcaacctccacctgccccccacacccctcaacct
ccacctgccccccacacccctcaacctccacctgcctcccatttgcctccagctccacct
gccccccaagcgccccaacctccacctgccccacatgtgccccaacctccacctgccccc
caggcaccccaacctccacctgctccacctgtcgctccaactccccctcagacaccaccc
actgcatatgtccctccactgccacctacccctcaaatccttcagcctcctcctccacct
ctccccaccctgagcccagctccacccgtgaccccggtggcatgtgtgccctctccacct
cctccacctcctcctcctccacctcctccacctcctcctcctcctctcccacctcccccc
gtgtgcagcccccccccgtcggtgtccggcgcccccctgcaccaccaccactccagcaac
cccacggtcttcgccaagtacagcaccatcacgcgcctgcagcagaaagacaagcccctc
ctccccgcccaggtgccaagcccacctccgcaagcggccaagccacagcccggcaaggac
aacggcgcctggccaccgccggacaccaccaccaccaccacccctcctcctccacctcct
ccgcctcctcctccaccacccccaccggccagtctgcccactccaggctcggccatggcg
acgctgaggcgcggaccggccgctggagctgcagtgcctcatcctcctccaccgccgctg
tcgtcgctgcacagtaacggcttccctccaccccctccgtcccccggtctcccggtggcg
cacgtcccgcccaagccctccaacggcttccagaggtttccatctccgccgccgcctgac
ctctcgccctcgccccctccccagctcctgacgcagtccgcgcctcctcctccacctcct
cctccacctccccctcccgcacctcctgctcccccactgcccccacagcagccccatgct
cacaccacaccaccccctcctcctcctcctccaccacctcctccacctccagcttctctc
cagcaggtctttcccccctccgctccacccaaaaccttccccttccagatgggccgtaag
cctcctgggatggtggtgcttcctactgcggtggctcctggccctcctcctcctccccct
cctccacctcctcctggaccgctggcatcggtccccgcgaagacccagccaccccccacc
ctccccaaacagcacagcatcggcagggcagccgcctcctctctggtcaagcaactggcc
agtcagttcccgggtgcggccgccaccaatcacgtggacagtgccaaggcgccgcagtcg
ccccctacggtcaaggccaagcccaagtggcagagaggaggagtgcagaccaagtcgcca
gagttccctccaccgcctcccgataacagcctgggtttccccccagctcccggtcctcct
ccacccccacctccccctcctcctccaccagcgcctgggcctgggcctgggtttggaccg
ggcctgcctcctcctccaccagcgcctgggcctgggcgtgggtttggaccgggcctgcct
cctcctccaccagcgccagcgcctgggcctgggcctgggtttggaccgggcctgcctcct
cctccaccccttcctccagcaaccccccccaaatctgggggctcgcccatgaagaaatcg
ccgacgggcgccgccaagaaaccaccgccgactccccagcgtaactccagcttcaaggcc
gactcgtctgcggagtacaacgaggcgcgagcgcggctggagaacctggtcggccgtcag
ggttccggctcctcggggtcggccgccgccgccgctggcccccccgcgccacccaaaccg
gggaagctcaacctgggccacctgcccccggcgctgcaggccaaagtggggaaagtggtg
accgacttcccctctccaccgcccctggacaacgactcgtccttcccccctccgccgatg
gacaacgacctgccaccgccgccgcctctgcccgccgaccttcacggcagcgcatcgcga
gtcgccgtggtcaacccccagccccagtcgtcatcatcgtcatcgtccagcggcggcggc
aacatctggagtgccgggcgggcttccttgaagaagacccctcccccgacgctggctcgc
cgtagcaacggcgccatccccaccgccatggaggtccaccgcccgatgtcgccgccgact
tcccccaagggtcagcccaacttcatggaggacctccaccggacactaaggcgcaagtcg
ggcagccggcagggctcgttcggtagcagcagcggcggcgagccggccatcacgaccacc
atggacgacatggcgctgcccccaccccctccagagctgctgctggaccagcaggccaac
ggcagcaacggcgggggctacgcatcaggaaacatctcaggctatgcaacactgcggcga
ggacctccgcccgcaccgcccaaacgggacaacggcaccaaactcacaaactag
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