Alosa sapidissima (American shad): 121698482
Help
Entry
121698482 CDS
T11137
Symbol
trim63b
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10655
tripartite motif-containing protein 63 [EC:
2.3.2.27
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121698482 (trim63b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asad04121
]
121698482 (trim63b)
Enzymes [BR:
asad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121698482 (trim63b)
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121698482 (trim63b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-B_box
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-RING_6
CRLF3_N
Sina_RING
zf-RING_11
Baculo_PEP_C
TRIM_CC
DUF8512
DUF1664
ZorA-like_t1
Motif
Other DBs
NCBI-GeneID:
121698482
NCBI-ProteinID:
XP_041936560
LinkDB
All DBs
Position
2
Genome browser
AA seq
347 aa
AA seq
DB search
MDIQRAGSLMGSPNSMESLEKQLSCPICLDMFTKPVVILPCQHNLCRSCASDLYDSRNPY
RFSGGVFRCPTCRFEVVLDRHGVHGLQRNLLVENIIDIYKQQQEGSGSGESSAPEAPVKP
KGGKEPMCQEHEDEKINIYCITCQVPTCSMCKVFGAHKDCEVSPLASVYQAQKAELSNAI
DALVAGNGRLQALLNQMDEACTAVQENAQRAKQNLGERFDGLYAVLEDRKATLLDRVGKE
QDEKVAVLRGLASRYGDRLQAGSELTDTAVRALEQSGAAEFLQASKGLITQTKDAAKGSL
AEERPEPGFERMDHFTINTEQVEALLAKMDFGVDDDEFEDAEGEEEE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggatatccaacgagccggctcactgatggggtcccctaactcgatggagagcctggag
aagcagctgagctgcccaatctgcctggacatgttcaccaagcccgtggtgatcctgccc
tgccagcataacctgtgccggagctgcgccagcgacctttacgactcgcgcaacccctac
cgcttttcgggcggcgtcttccgctgccccacgtgccgcttcgaggtggtgctggaccgc
catggcgtgcacgggctccagcgcaacctgctggtggagaacatcatcgacatctacaag
cagcagcaggagggcagtggcagcggcgagagtagcgcccccgaggcgccggtcaagccc
aagggcggcaaagagcccatgtgccaggagcacgaggacgagaagatcaacatctactgc
atcacctgccaggtgcccacctgctccatgtgcaaggtgttcggcgcgcacaaggactgt
gaggtgtcgccgctggccagcgtctaccaggcgcagaaggccgagctgagcaacgccatt
gacgcgctggtggccggcaacgggcggctgcaggcgctgctgaaccagatggatgaggcg
tgcaccgccgtgcaggagaacgcccagcgcgccaagcagaacctgggcgagcgcttcgac
ggcctatacgccgtgttggaggaccgcaaggccacgctgctcgaccgagttggcaaggag
caggacgagaaggtggcggtgctgcgcgggctcgcttcgcgctacggcgaccgcctgcag
gcgggctcggagctgaccgacacagcggtgcgtgcgctggagcagagtggtgctgccgag
ttcctgcaggcctccaagggcctcattacgcagaccaaggatgcggccaagggctcgctg
gccgaggagcggcccgagccgggtttcgagcggatggaccacttcacaatcaacacggag
caggtggaagcactgctggccaagatggactttggggtggacgatgatgagtttgaggat
gccgaaggggaggaagaggagtga
DBGET
integrated database retrieval system
