Alosa sapidissima (American shad): 121700051
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Entry
121700051 CDS
T11137
Symbol
rfng
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
asad
Alosa sapidissima (American shad)
Pathway
asad00514
Other types of O-glycan biosynthesis
asad04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
121700051 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121700051 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
asad01003
]
121700051 (rfng)
Enzymes [BR:
asad01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
121700051 (rfng)
Glycosyltransferases [BR:
asad01003
]
Glycan extension
O-Glycan
121700051 (rfng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
DAAP1
Motif
Other DBs
NCBI-GeneID:
121700051
NCBI-ProteinID:
XP_041938653
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All DBs
Position
24:21935828..21952280
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AA seq
390 aa
AA seq
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MHLSHIGINKLCFLVSLALCAFLLLLIPTLQAPPRQGDRLPPPPRPHTKPASAAGRLPSG
GSARSNKTTVAHRVTLDESQQTRKESAGAEIRSLKGDAGAAAAAAAAQRRYSGSRSRDPL
EPKDIFIAIKTTKKYHKTRLELLFQTWVSRAKEQTFIFTDGEDKELRKKPGLNMINTNCS
AAHTRQALCCKMSVEYDKFIESQKKWFCHVDDDNYVILPSLLRLLASYSHTQDVYLGRPS
LDHPIEAAERVKSDGSVSVKFWFATGGAGFCISRGLALKMSPWASLGNFITTAEKIRLPD
DCTIGYIIEALLEVSMTHTHLFHSHLENLQRLPSNTVLDQVTLSYGGFENRRNVVSVGGI
FSLAEDPSRFKTIHCLLYPETEWCPKKSRP
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgtcccacatcggcatcaacaagctctgcttcctcgtctcgctggccctatgc
gccttcctcctgctcctaatccctaccctccaggctcccccgcgccagggggaccggctg
ccacccccgccccgaccccacaccaagcctgccagcgcagcgggccgtcttccgtccggc
ggcagtgcccgctcgaacaagaccactgtggcacacagggtcacgctcgacgagagccaa
cagactcgtaaagagagtgctggggctgagatcaggtccctcaagggggatgctggcgct
gctgctgctgctgctgctgctcagaggagatattcagggtctcgttccagagacccgctc
gagcccaaagacattttcatcgccatcaaaacaaccaagaagtaccacaagactcgtctg
gagctgctcttccagacctgggtgtccagagcaaaggagcagaccttcatattcactgat
ggtgaagataaggagctgaggaagaagccagggctgaatatgatcaacacgaactgttca
gctgctcacacccgtcaggccctgtgctgtaagatgtctgtggagtacgacaagttcatt
gagtcacagaaaaagtggttctgccatgtggacgacgataactacgtgatcctgcccagc
ctgctccggctgctagcctcctactcccacacgcaggacgtgtatctgggtcggccgagc
ctggaccaccccatagaggcagccgagagggtcaagagcgacggatcggtgtcagtcaag
ttctggtttgccaccggtggagccggtttctgcatcagtagaggactggcactcaaaatg
agcccgtgggcaagcctcggtaacttcatcaccacggcagagaagatccgtctccctgac
gactgcaccatcggctacatcatcgaggcgttgttggaggtctccatgacgcacacacac
ctgttccactcgcacctggagaacctgcagcggttgcccagcaacactgtgttagatcag
gttaccctgagctatggaggatttgagaatagaaggaatgtggtcagtgtcgggggcatc
ttctcattggccgaagacccgtcacggtttaaaaccatccactgccttctgtatccagag
acggaatggtgccccaaaaagagccgcccctga
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