Alosa sapidissima (American shad): 121700505
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Entry
121700505 CDS
T11137
Symbol
lgi1b
Name
(RefSeq) leucine-rich glioma-inactivated protein 1b
KO
K25428
leucine-rich repeat LGI family member 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
121700505 (lgi1b)
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GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRRCT
VWC2L_1st
LRR_14
Motif
Other DBs
NCBI-GeneID:
121700505
NCBI-ProteinID:
XP_041939425
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Position
24:6790478..6795787
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AA seq
543 aa
AA seq
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MGYTNKTVRGCALLLWIGTLLLLTEGRRPKQPKCPASCTCTKDNALCENIRSVPHSFPPD
VVSLSFVKSGFTEIAGGSFLHTPALQLLLFTANSFDSIDEDAFLGLPHLEYLFIENNKID
SISPFAFRGLKSLTHLSLAYNNLESLPKDVFKGMDALTKVDLRGNLFHCECKLKWLVEWM
YSTNATVDQIFCAGPPLYKGKKINDLVPQSFDCITAEFASHQPLKFESISVEAFTFGNDQ
YVVFAQPFTGTCSFLEWDHVEMVFRTYDSIESTSTVVCKPLVIDNQLFIIVAQLFGGSHI
YKRDVSANKFIKIQDIDILKIRKPNDIETFRIDGESFFVIADSSKAGSTTVYKWNGNGFY
SHQSLHPWYRDTDVEYLDIVGKPHLILSSSSQRPVIYQWNKGLKQFDRRTDIPEMEDVYA
VKHFHVKGDLYICLTRFIGDSKVMRWDGNMFVELQTMPSRGSMVFQPVVIGSWQYAILGS
DYSLTQVYQWDSKKGQFVHFQELNIQAPRAFALVSIDNKEFLLASSFKGKSQIYEHLIID
LSN
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgggatacacaaacaaaaccgtgagaggctgcgctctcctgctgtggatcggtactcta
ctgcttctgacggagggcaggagaccgaagcagcccaaatgccccgcatcttgcacatgc
accaaagataatgccttatgtgaaaacatacgatcggttccccacagtttcccacctgac
gtggtgtcactatcttttgtgaaatcgggattcacagagattgcagggggaagcttcttg
cacacgcctgctcttcagctcctcttgttcacagccaactcatttgattccattgatgaa
gatgcattcctgggattgccccaccttgaatacttgttcattgaaaacaacaaaattgat
tcaatatcaccttttgcattccgtggtctgaagtcgctaacacacctgagccttgcctac
aataacctagagtcactgccaaaagatgtgttcaagggtatggatgccttaacaaaagtg
gatctgagaggaaacctgtttcactgtgaatgcaagctcaaatggctggtggagtggatg
tacagcacaaatgccacagtggatcagatcttctgtgcagggcctcccctctacaaaggg
aaaaagatcaatgacctcgtgccccagtcgtttgactgtatcacagcagagtttgcctct
caccagcctcttaaatttgaatccatttccgtggaggccttcacgtttggaaatgatcaa
tatgttgtgtttgctcaacccttcactggaacatgcagtttcctggaatgggaccatgta
gagatggtcttccggacatatgacagcattgagagcacatccacagttgtgtgcaaacct
ttagttatcgacaaccagctcttcatcatcgtggcccagctgtttggcggttcccacatc
tacaagcgggacgtatcagccaacaagttcattaagatccaggacatcgacatactgaag
atccgcaagcccaatgacattgagacctttcgcatcgacggagagtccttcttcgtgatt
gccgacagttccaaggccggctccaccactgtctacaagtggaacggcaacggcttctac
tcccaccagtcactccacccgtggtaccgcgataccgacgtggagtacctggacatcgtg
ggcaaaccacacctgattctctccagcagttcccagcgacctgtcatctaccagtggaac
aagggtctgaagcagtttgaccggcgcaccgacatccccgagatggaggacgtgtacgct
gttaagcactttcatgtcaagggcgacctctacatctgcctaacgcgtttcatcggtgac
tccaaggtcatgcgctgggatggcaacatgtttgtggagctgcagaccatgccctcgcga
ggctccatggtcttccagcctgtggtcatcgggagctggcagtacgccattctgggcagc
gactactccctcacacaggtctaccagtgggactccaagaagggccagtttgtccacttc
caggagctgaacatccaggccccccgggcctttgccttggtgtccattgacaacaaggag
ttcctgttggcatccagctttaaagggaaaagccagatttatgagcatctgatcatagat
ctgagtaactaa
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