Alosa sapidissima (American shad): 121702551
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Entry
121702551 CDS
T11137
Symbol
cxcr4b
Name
(RefSeq) C-X-C chemokine receptor type 4b
KO
K04189
C-X-C chemokine receptor type 4
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03250
Viral life cycle - HIV-1
asad03260
Virion - Human immunodeficiency virus
asad04020
Calcium signaling pathway
asad04060
Cytokine-cytokine receptor interaction
asad04144
Endocytosis
asad04672
Intestinal immune network for IgA production
asad04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121702551 (cxcr4b)
03260 Virion - Human immunodeficiency virus
121702551 (cxcr4b)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121702551 (cxcr4b)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121702551 (cxcr4b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121702551 (cxcr4b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
121702551 (cxcr4b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
121702551 (cxcr4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
asad04030
]
121702551 (cxcr4b)
04050 Cytokine receptors [BR:
asad04050
]
121702551 (cxcr4b)
04090 CD molecules [BR:
asad04090
]
121702551 (cxcr4b)
G protein-coupled receptors [BR:
asad04030
]
Rhodopsin family
Chemokine
CXC Chemokine
121702551 (cxcr4b)
Cytokine receptors [BR:
asad04050
]
Chemokine receptors
CXC Chemokine
121702551 (cxcr4b)
CD molecules [BR:
asad04090
]
Proteins
121702551 (cxcr4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
CXCR4_N
COX2_TM
SFXNs
Motif
Other DBs
NCBI-GeneID:
121702551
NCBI-ProteinID:
XP_041940138
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All DBs
Position
2:24329238..24331102
Genome browser
AA seq
390 aa
AA seq
DB search
MIRRQRVGNFTCVLLNSCWGLFHVSGTKVNLKMEEGFHYTYVFNMNDFNNSEEGSGDMDD
YDELCEGALNNDFQKIFLPIVYGIIFVLGIVGNGLVIVVMGYQKKSSNMTDKYRVHLSVA
DMLFVLSLPFWAVDVASSWYFGGFLCVAVHMIYTVNLYSSVLILAFISLDRYLAVVKATN
SLSTRKLLAERIIYIGVWLPAALLTVPDLVFARAEERGSRTFCERVYPLEGNVIWMAVFR
FQQILVGFVLPGLIIFTCYYIIISRLSQGSKGQTLKRKALKTTVILIVCFFFCWLPYCIG
IFVDTLSQLNVIGGNCGLMQGLQKWIPISEVLAYFHCCLNPILYAFLGVKFKKSARNTLN
SRSSHKILTKKRGIISSVSTESESSSVLSS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcagacaacgtgtcggcaattttacctgtgtgctcctaaacagttgctggggt
ctgtttcacgtctcggggactaaagtaaatttgaagatggaagagggattccattacacc
tatgtgttcaatatgaacgactttaacaactccgaggaagggtcgggggatatggacgac
tatgatgagctctgtgaaggagcgctcaacaatgacttccagaaaatcttccttccaatc
gtgtacggaataattttcgtcctcggcatcgtcggaaatgggcttgtgattgttgtgatg
ggctaccagaagaagtcgtccaacatgactgataaataccgcgtccacctctctgtagct
gatatgttgtttgtgctctcgttgcccttttgggcagttgatgtggcgagcagttggtac
tttggtggatttctctgtgttgctgtgcacatgatctacactgttaacctgtacagcagc
gtgctgatcttggcttttattagcctggacagatacctggccgttgttaaagcgactaac
agcctgtccaccagaaaacttcttgcagagcgcattatttacattggcgtgtggctacct
gctgcgctgctcactgtgcctgacctggtgtttgcgagagcagaagagaggggcagcaga
actttctgcgaacgcgtctaccctttggagggcaacgtgatttggatggctgtgtttcgt
ttccagcaaattctggttggatttgtgctgcccggacttatcatcttcacctgctactac
atcataatttcacgactctctcagggttccaaaggacagacgctgaagaggaaggctctg
aagaccacagtcatcctcattgtttgcttcttcttttgctggctcccgtactgcattggc
atctttgtggacactctctcccagctcaatgtcatcggcggcaactgtgggctgatgcag
ggccttcagaagtggattcccatctcagaagtgctggcttacttccactgttgtctgaat
cccattctgtatgcgttccttggggtaaaattcaagaaatccgcccggaacacactcaac
agcagatccagtcacaagattctgaccaagaagagaggaattatctcatcagtatccaca
gaatcagaatcctccagtgtcctttccagttaa
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