Alosa sapidissima (American shad): 121704610
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Entry
121704610 CDS
T11137
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121704610 (smcr8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121704610 (smcr8a)
Membrane trafficking [BR:
asad04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
121704610 (smcr8a)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121704610
NCBI-ProteinID:
XP_041940929
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Position
3:9100083..9105531
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AA seq
900 aa
AA seq
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MIGSPDVVAFTKEDDFGELYPDPYVLPEEFSVPLFTHATNPWTKTTYAKFSKDFILISEF
SEQVGPQPLLTIPDDSKVCGTFDLNYFSLRIMSVDYQASFVGHPPGSNYPKLNFVEDSKV
VLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADERKIMQQFQKLSSEFSKASECL
KCGNRKAFANELLKKLKDLEYTRSVVHKEAELQKMNNGCYSTQAIEKANELANVEKSIYE
HKDLLRQITSYPSRKRKDPECVSFEPEKPIDTSDVDLALSSIPSDLEDKTAAGDEADQRP
SYIPQLIKAKSAKCFDKRLKTLEELCESTFFHQTMDQLKLIEQSFRGDLCYIYTSQIDRA
LVRRQKVTNFLFEEEEGWQEEGPTKQYEAAGLPVVNQPPSMSDMCAEPMSLESYSSCVDT
IQIKTEPELAEGPPESSPSDFTQETSEEAADTETKGSFSSDRSIEAISPGNLQMQYQDTV
EVGTSAGIEECTTIADSAFLDQGAADSSSLYYEMPSVQTGTDGGVSTFPLLENDMAMNHA
AVTYQTGSIVQVDTACCMGQEGFISEEPLSKPPHDGCGDMVVKHEPLSLLQRDPALQGDY
VLGEPALESPCTGLSLPELNSNTLSEEMARINVEDASDTTSYMSTSTSSDRAPSPFCHGD
PVTLKQKKRAGQSTLKFIRQYPFAQQAIFCLLSGRTLVVLGAEEGTVRKLVNALSIFVPN
LGKYGETVQPWLSTPFQLTDLHRWKLIGLQRMASPTGSSILHSLSRYSRYIGILDTDNKT
MRCPPYKGTLLGHMADHRTQIKRGSTYFLHVQSMLTQLTAKAFLFTFCHHLHLPVGSEDE
DSVVARRTSFLHHLGYSEEESKIVHFLSELIKQHYIQGPSKGTSQSVLRFNYTTSYLYKI
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgatcggctcaccagacgtggtggcttttaccaaagaagatgactttggagagctctat
ccggatccgtatgtcctcccagaggagttttccgtgcctttgtttacccatgctacgaat
ccatggacgaagaccacctacgctaaattttccaaggattttatcctcatctccgagttc
tctgaacaagtgggtccacaacccctgctcaccattccagatgactcaaaagtatgtgga
acatttgaccttaattatttctcactgcgcatcatgtctgtggactaccaagcttcattc
gttgggcaccctccagggtccaactacccaaagctcaattttgtggaggactctaaagtg
gttctgggggactcaaaggagggtgcctttgcctatgttcatcatctgaccttgtatgat
ctggaagctcggggctttgtcaggccattctgcatggcgtacatctctgcagatgaaaga
aagatcatgcagcagtttcagaagctctcctctgagttctctaaagcctcagagtgtttg
aaatgtgggaaccgaaaagcttttgcaaacgaactgctgaagaaactgaaagatctagag
tataccaggtcagtagtccacaaagaggctgagttgcaaaagatgaacaatggctgctac
tccacacaggccattgagaaagctaatgaattggctaatgtcgaaaagtccatatatgaa
cacaaagacttgttgaggcagatcacgtcttaccccagcagaaagaggaaagaccctgaa
tgtgtttcatttgaaccagagaaacccatcgacacgagcgatgtagaccttgcactctca
tccataccttctgacctcgaagacaagacagcagcaggagacgaggctgaccagagaccg
tcttacatacctcaactcatcaaagcaaaatctgctaaatgttttgacaagcgactgaaa
acactggaggagctttgcgaatccacttttttccatcagactatggatcaactgaaactc
attgaacagtctttcagaggggatctttgctacatatacaccagtcagatagaccgagct
ttggtccggcggcagaaagtaaccaattttctctttgaggaggaagagggatggcaagaa
gagggacccacaaagcagtatgaggcagctggtctccctgtagtgaaccaaccaccctcg
atgtccgacatgtgtgcagaaccgatgagcctggaatcgtattcatcctgtgtggacacc
attcaaatcaaaacagagcctgaattggcagagggccccccagagtccagcccctccgat
ttcactcaggaaacctctgaggaagccgctgacacagaaacaaaagggagcttcagtagt
gaccgaagcatagaggctataagcccaggcaacctacagatgcaatatcaagatactgta
gaagtggggacaagcgctggcattgaggaatgtactaccatagctgacagtgcatttttg
gaccagggtgcagctgactcctccagtctatattatgaaatgccctctgttcaaactggg
acagatggaggcgtcagtacatttcctttattagaaaatgacatggccatgaaccatgct
gctgtcacgtaccaaactggaagcattgttcaagtggatactgcctgctgtatggggcag
gagggtttcatcagtgaggagcccttgtccaagccgccgcacgatggctgtggggacatg
gtggtgaaacatgaacctctgtctttgctccagagggaccctgcactccagggagactat
gttttaggtgagcctgccttagaaagcccttgcacgggactgtctctccctgagctcaac
tcaaacacactctcggaggagatggccaggattaatgtcgaggacgcctctgatactacc
agctacatgagcacgtccaccagttcggaccgggcaccgtcaccattctgccatggtgac
ccagtcaccctgaaacagaagaagagggcagggcagagcaccctgaaattcatccggcaa
tacccctttgcgcagcaagccatattctgcctcctgagcggacggactctagtggtgtta
ggagccgaggaaggcacggtgaggaagctggtcaacgcgttgtctatttttgtgcccaac
cttgggaaatatggagaaactgtacagccttggctctcgacaccgtttcaactgactgac
ctacacagatggaagctcattggtcttcagaggatggcatcacccacaggatccagcatt
ctccactctctgagccgctatagtcgttacataggcattctggacactgacaacaagaca
atgcggtgccctccgtacaaaggcactctgctcggccacatggccgaccacaggactcag
atcaagaggggaagcacttacttcctccacgtccagagcatgctgacccagctcaccgcc
aaggcatttcttttcacgttctgccaccacctccatctccctgtcggttcggaggatgaa
gactccgtcgtggcgcgcaggactagctttttgcatcatctgggctacagcgaggaggag
agcaaaatcgttcacttcttaagtgagctcatcaaacagcattacattcaggggccttcc
aagggaaccagccaatcagtcttgcgttttaattacaccaccagctatttgtacaagatc
taa
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