Alosa sapidissima (American shad): 121704854
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Entry
121704854 CDS
T11137
Symbol
lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
asad
Alosa sapidissima (American shad)
Pathway
asad00514
Other types of O-glycan biosynthesis
asad04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
121704854 (lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121704854 (lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
asad01003
]
121704854 (lfng)
Enzymes [BR:
asad01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
121704854 (lfng)
Glycosyltransferases [BR:
asad01003
]
Glycan extension
O-Glycan
121704854 (lfng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
PSK1
Motif
Other DBs
NCBI-GeneID:
121704854
NCBI-ProteinID:
XP_041941314
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All DBs
Position
3:complement(29825869..29835973)
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AA seq
385 aa
AA seq
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MLKSYGRKTALSVAGATLACLVVLLLVAQQQQRLQVDEMSSESEVGMRSLQSLRDLGAES
GVLTDSDSETLQGQQNGDTRKGFSAYFSKLSRGRREVEKPTLSTNAATDTTPAEDISADD
VFIAVKTTKKFHRSRLDLLLDTWISRNLQQTYIFTDGEDEELKKKVGSHAINTNCSAAHS
RQALSCKMAVEYDKFIESGKKWFCHVDDDNYVNVRTLVKLLSNYPHTQDMYIGKPSLDRP
IEATERLGDNKMRPVNFWFATGGAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTV
GYIIESVLGVPLTRSNLFHSHLENLQQVSKSELHKQVTLSYGMFENKRNIINMKGAFPVE
EDPSRFKSVHCFLYPDTPWCPPQVA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaagttacggcaggaaaacagcgctctctgttgcaggagcaactttagcctgc
ctggtagtgctcctgctagttgcccagcagcagcagcgactacaggttgatgagatgtcc
agtgagagtgaagttgggatgcgctcactgcagagtctccgcgacttgggcgcagagtca
ggcgtacttacggattcagactcagagacacttcagggacagcaaaacggcgacaccagg
aagggattctctgcgtatttctccaagttgtctcgcggtaggagagaagtggagaagccc
acgctgtcaaccaacgcggcgacggacacgacacccgctgaggacatcagcgcggatgac
gtcttcatcgcagtcaaaaccacgaagaagtttcatcggtcgagactggatctgcttctc
gatacctggatttcaagaaatctacagcagacgtacatcttcacggatggcgaagatgag
gagctaaagaagaaagttgggagccacgccataaacaccaactgctccgcagcccacagc
cgccaagccctgtcctgcaagatggccgtggagtacgacaagttcatcgagtctgggaaa
aagtggttctgccacgtggatgatgataactatgtgaacgtgaggacactggtcaaactg
ctgtccaactacccccacacccaggacatgtacattggcaagcccagcctagacaggcct
attgaggccacagagaggctcggagacaacaaaatgaggcccgttaacttttggtttgct
accggaggcgctggcttctgtgtgagccgaggcttggctctgaagatgagcccgtgggca
agtggtggccattttatgaacaccgcggagaagatccgtctcccggacgactgcaccgtc
ggctacatcatcgagtcagtgctgggggtgcctttgacccgcagcaacctgttccactcc
cacctggagaacctgcaacaggtgtccaagtctgaactccataaacaggttacactgagc
tatggaatgtttgagaacaagaggaatatcatcaacatgaaaggggcttttccggttgag
gaggacccatccaggtttaagtctgtgcactgtttcctgtacccagacactccctggtgt
cccccccaggttgcctaa
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