Alosa sapidissima (American shad): 121705626
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Entry
121705626 CDS
T11137
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11B-like
KO
K05148
tumor necrosis factor receptor superfamily member 11B
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121705626
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
asad04050
]
121705626
Cytokine receptors [BR:
asad04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121705626
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Death_TNFRSF11B
TNFR_c6
Death
Motif
Other DBs
NCBI-GeneID:
121705626
NCBI-ProteinID:
XP_041942631
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All DBs
Position
3:11205456..11219301
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AA seq
417 aa
AA seq
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MTVRNMRPQTTMKIYMFLTASIAWALHDVQPHKYSHRDPVTFELHLCDQCPPGTAVSRHC
DGQRRTECSPCPERHFAEQWHWGESCQYCTAVCKEKQLVRQECNATHDQVCECVPGYHLV
VEFCVRHTPCLPGSGVTALGMPESDTVCEACPDGYYSSVSSATEPCVPHRNCSQLGYKTL
RHGTSTQDVVCDNEALVPTECNTLDMQCHTDTLLCEEAIFQFLASPRLASIPLERLLESL
PGRRVDWKSVERLKKACSPQQQLLQLLRLWREQNKDQDKLFSIIQGVNVCERKVLRCAGL
KNLTLGDLLAVTQSLPGVRVSDEDVRTLVVSCPSQQHILQLLHLWKSRNSERDVGKALAQ
SLRRLRGRGHAVSKRLLKSLKRIARIIGASTMYRLYEKMFFNMIQDSSCFKSKAYND
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgactgtccgaaatatgagaccacagacaacgatgaaaatatacatgtttctcaccgcc
tccattgcctgggccctgcatgacgtgcagccacataagtactcgcatcgagatccggtc
accttcgagctgcacctgtgcgaccagtgcccgcccggcacggcggtcagccgccactgc
gatggccagcggcgcaccgagtgcagcccgtgcccggagcggcactttgcggagcagtgg
cactggggcgagagctgccagtactgcacggccgtctgcaaggagaagcagctggtgcgg
caggagtgcaacgccacccacgaccaggtgtgcgagtgcgtgccaggctaccacctggtg
gtggagttctgcgttcgccacacgccgtgcctgcctggaagtggtgtcacggccctaggg
atgccagagagtgacacggtgtgcgaggcgtgtcctgatggctattattctagcgtatcg
tcggccacagagccctgcgtcccccaccgcaactgtagccagctcggctacaagaccctc
cgacacggaaccagcacgcaggacgtggtgtgtgataacgaagctttagtccccaccgag
tgcaacaccctggacatgcagtgccacacagacaccctgctctgcgaggaggcgatcttc
cagttcctggcatccccgcgcctggcctccatcccgctggagcgcctgctggagagcctg
ccgggccggcgcgtggactggaagagcgtggagcgtctgaagaaggcctgcagcccacag
cagcagctcctgcagctcctgcgcctgtggagggagcagaacaaggaccaggacaagctc
ttcagcatcatccaaggagtgaatgtgtgtgagaggaaggtgctgcgctgtgctggcctg
aagaacctgacgctgggcgacctgctggcggtgacgcagagccttccgggcgtgcgtgtg
agcgacgaggatgtgcgcacgttggtggtctcctgcccctcgcagcagcacatcctgcag
ctgctgcacctgtggaagagccgcaacagcgagcgtgacgtgggcaaagccctggcccag
agtctacgccggctccggggccgcggtcacgccgtctccaagcgtctcctcaagagcctc
aagcgcatcgcccgcatcatcggggcctccaccatgtaccgactttacgagaagatgttc
ttcaacatgattcaggacagctcgtgctttaaatccaaagcctataacgactag
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