KEGG   Alosa sapidissima (American shad): 121705759
Entry
121705759         CDS       T11137                                 
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b
  KO
K04359  platelet-derived growth factor subunit A
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad04010  MAPK signaling pathway
asad04020  Calcium signaling pathway
asad04510  Focal adhesion
asad04540  Gap junction
asad04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:asad00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    121705759 (pdgfab)
   04020 Calcium signaling pathway
    121705759 (pdgfab)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121705759 (pdgfab)
   04540 Gap junction
    121705759 (pdgfab)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    121705759 (pdgfab)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:asad04052]
    121705759 (pdgfab)
   00536 Glycosaminoglycan binding proteins [BR:asad00536]
    121705759 (pdgfab)
Cytokines and neuropeptides [BR:asad04052]
 Cytokines
  Growth factors (RTK binding)
   121705759 (pdgfab)
Glycosaminoglycan binding proteins [BR:asad00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   121705759 (pdgfab)
SSDB
Motif
Pfam: PDGF_N PDGF SAM_EPH KH_PARP14_8
Other DBs
NCBI-GeneID: 121705759
NCBI-ProteinID: XP_041942892
LinkDB
Position
3:14925575..14948938
AA seq 199 aa
MRTALFYFLLCTSCLVLINAEELPQELIERLSHSEINSISDLQRLLDIDFVGTGNEVIEE
HKQKQHKQNYSHTYSDLKSSQVHRRRKRSVEEAVPAVCKTRTVIYEIPRSQVDPTAANFL
IWPPCVEVKRCTGCCNTSNMRCHPSRKHHRTVKVAKVEYVRRKPKLKEVFVRLEDHLECV
CTSHHHVVEHADADTVDVR
NT seq 600 nt   +upstreamnt  +downstreamnt
atgagaaccgcacttttctacttcctcctctgtacgtcgtgcctggtgctcattaatgcc
gaggaacttccacaagagctgattgagcgactgtcccacagtgaaatcaacagcatcagc
gacctccagcggctcttggacatagacttcgtaggtacgggaaatgaagtcatcgaggag
cacaagcagaagcagcacaagcagaactattcccacacttactcggacctgaagagctcg
caggtccaccgcagacgcaagaggagtgtggaggaggccgtgccggcggtgtgtaagaca
cggacggtgatctacgagatcccgcgcagtcaggtggaccccaccgctgccaacttcctc
atctggccaccttgcgtggaggtcaagcgctgcacgggatgctgcaacaccagcaacatg
cgctgccacccctcgcgcaagcaccaccgcaccgttaaggtggccaaggtggagtacgtg
cggaggaagcccaaactcaaggaggtgtttgttcggttagaggaccacctggagtgtgtg
tgcacgtcgcaccatcacgtggtggagcatgcagacgcagacacagtggacgtgaggtga

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