KEGG   Alosa sapidissima (American shad): 121707433
Entry
121707433         CDS       T11137                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123 isoform X1
  KO
K12169  Kip1 ubiquitination-promoting complex protein 1 [EC:2.3.2.27]
Organism
asad  Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:asad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:asad04121]
    121707433
Enzymes [BR:asad01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     121707433
Ubiquitin system [BR:asad04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121707433
  Multi subunit type E3
   KPC complex
    121707433
SSDB
Motif
Pfam: SPRY zf-C3HC4_3 zf-RING_2 zf-C3HC4 zf-C3HC4_2
Other DBs
NCBI-GeneID: 121707433
NCBI-ProteinID: XP_041945921
LinkDB
Position
4:complement(2976616..3097175)
AA seq 1297 aa
MSSKGGGTALSRANYRLASDTEKPKATGIVNEKLLSDYLHHVFPRYGLTSAAYRKTLTFP
DLEAHLEHLLSEGELTEDSRDQAAEGRLGPFTVVLDHTSGFEGLLFVDDDLLGVIGHSNF
SSIRATTCVFKGKWVYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVRKW
NVTTTNYGKSWAAGDIVSCLIDLDDGTITFCLNGQSLGTAFSNIKMGPGIAYFPAISLSF
KESVAFNFGSRPLRYPVEGYKPLQDPPAADLIKANRLLGYIKTVLSTTIDTQEERLVEKD
SSFWQLQGEPTVLVTLAHIFNYFAPLMCKVYLVEDVLMNFLLGILEGGGSVDEHPLIQQL
LDLFWLLMEDYEVNECLKQLMMSLLRAYRFSPIIPDLGFQIHYLRLTTAILRHEKSRKYL
LNNVLFDMLRSVVFFYIKTPLRVKEAGLEELIPTTWWPTRFDKEGRDDNEVKEESADERL
RRRAYERGCQRLKKRIEVVEELQVQILRLMLNNKDKGTGQASRYIFLNKFRKFLQENASN
RANPTVLCPPEYMVCFLHRLITAVRSYWDEGKRKSVGSISSEEAYVPPQLFYNGKVDYFD
LQRLGGLLSHLKKTLKDDLASKANIIIDPSEILPSSMDDLDEDEESGAAQRPLGAAATGG
APVRPSWLSSPTLGRANRFLSTAAVSLMTPRRPLAPPEKVKVRTLAVEQRTEEDIEGNHG
NDGLLLGRPLEEPDQPITEKSLLEILDGIVMMYNLSVHQQLGKMVVVADDVHEYAVALKD
TEEKIARCPNRRGDIMDELLKSQKVFAEKLNHLSRRLAWINATIYSKEKMLDVYWLLRVC
IRTIEHSDNTGSLFAFTPEFYLNVAMNSYSALKNYFSPANSMDELPGYEDTLTQLAAILA
KHFADPRIVGTDIKDSLMQALASYVCYPQSLRAVERIPEDQRVAMMRNLLAPYEQRPWAQ
TNWILVRFWKGCGFGYRYTRLPHLLKTKPEDATLPSLQKPCPSLLLQRHMAELLRHDKDM
AASFLNSVLNQLNWAFSEFIGMIQEIQQAAERPERNFVDTRQLKVCATCFDLSVSLLRVL
EMTVTLVPEIFLDWSRPSAELLLRRLAQLLNQVLNRVTAERNLFDRVVNLRLPGLESVDH
YPILVAVTGILVRILVESDRQGVARAASVLLSDPCFQLHSIQHLLGEGEASAAGTDRKHF
SLHAYADYISAEEEQKVEQMLAFLTEESKQAAACTAPTSEEDLCPICYAHSISAIFKPCS
HKSCKACINQHLMNNKDCFFCKATITGVEDYVKPLGS
NT seq 3894 nt   +upstreamnt  +downstreamnt
atgagctctaagggaggaggtacagccttgagccgtgctaattaccgcctggcctccgac
actgagaaacccaaagccacagggattgtgaatgagaagctgctgagtgactacctgcac
catgtatttcccagatatggactcacatcagctgcttacaggaaaaccttaaccttccca
gacctggaggcccatttggagcacctgctgtcagagggcgagctcacagaagacagtaga
gaccaggcagctgaaggccgtcttggaccctttacggtagtgttggaccacaccagtggc
tttgaaggcctcctctttgttgatgatgatctccttggggtcattggccacagcaatttc
agctccatcagagctaccacttgtgtattcaaagggaagtgggtgtatgaggtgctcatt
tcatcccagggcctgatgcagatcggttggtgcactctcaactgcaggttcaatcaggag
gagggtgttggtgatacaccggactcatatgcttatgatgggaacagagtgcgcaagtgg
aatgtcactactacaaactatggaaagtcatgggcagcaggagacattgtcagctgtttg
attgatttggatgatggcactataacattttgtttaaatggtcagtccctgggtacagcc
ttcagtaacattaagatgggccctggcatagcatactttccagccatcagtctttccttc
aaagagtctgtggcattcaattttgggagccgccctctcagatatcctgtggagggttac
aaaccactgcaggaccctcctgctgctgacctcattaaagccaataggctgctgggttac
atcaaaactgtgctgtccactaccattgatacccaggaggagaggcttgttgaaaaagac
agctcattttggcagcttcaaggagaaccaacagttcttgtcacccttgcccacattttt
aactactttgcaccactgatgtgtaaggtgtatctagtggaggatgtgttgatgaacttc
ctgttgggcatcttggagggtgggggctcagtggacgaacatcctctcatacagcagctc
ctggaccttttttggctgctcatggaggactatgaggtgaatgagtgcctgaaacaactg
atgatgtcacttcttcgggcctatcgattttctcccatcatccctgacctggggttccag
attcactacttgcgtttgactacagccatcctacgtcacgagaagtccaggaaatatttg
ctcaataatgtcttattcgacatgttgcgctccgtcgtattcttctatattaaaacacct
ctgagggtgaaggaggctggcctggaggagctcatccctaccacatggtggcccacacgc
tttgacaaagagggaagagatgacaatgaggtgaaggaggaaagtgcagatgagcgcctc
aggagaagagcgtatgaacgtggctgccagaggctcaagaagaggattgaggtggtggag
gagctgcaggtgcagatcctgaggctcatgttgaacaacaaggacaaaggaacgggccag
gcatccagatatatattcttgaacaaattccggaaatttcttcaagagaatgccagcaac
agagcgaacccgacggtgttatgtcctcctgagtacatggtgtgttttctgcatcgtctc
atcacagctgttcgaagctattgggatgaggggaagaggaagagtgtggggagtataagc
agtgaggaggcctatgtcccacctcaacttttctacaatggaaaagtggactacttcgac
ttgcagaggctaggagggctcctctctcatctgaagaagactctgaaagatgacctggcc
tccaaggcaaacatcatcatagacccatctgagattttgccttcatctatggatgaccta
gatgaggatgaggagagtggagcagcccagaggccacttggagcagcggcgaccggaggt
gcccctgtgcggcccagctggctgagctcccccactctgggccgtgccaaccgcttttta
agcacagctgctgtcagcctcatgaccccacgtcgaccccttgctccacctgagaaggtt
aaggttcgcacgttagctgtggaacaacgcactgaggaagacattgagggaaaccatggc
aacgatggtttgttgctggggcgaccattggaagagccggatcagccaatcacagagaag
tcgcttctggagatcttggatgggattgtgatgatgtacaatttaagtgtccatcaacag
ctgggcaagatggtagttgttgctgatgatgtacatgaatatgctgtggcccttaaagac
acagaggagaaaatagccagatgtcccaacaggagaggagacataatggatgagcttctg
aagagtcagaaggtttttgcagagaaattaaaccacctgagtcgaaggctggcctggatc
aatgccaccatatattctaaggagaaaatgttggatgtgtactggctgctgcgagtgtgt
attcgcacaattgagcattctgacaacactggttctctgtttgccttcacccccgagttc
tacctcaatgtggccatgaacagctacagtgccctcaaaaactactttagcccagccaac
agcatggacgagctgccaggctatgaggacacactcactcagcttgctgctattcttgct
aaacactttgcagatccacgcatagtggggacagacatcaaagactctctcatgcaggct
cttgccagctatgtgtgctacccccaatccctcagggctgtggaacgaatcccagaggat
caacgtgtggcgatgatgaggaatctgctggctccttatgagcagaggccctgggctcag
acaaattggatccttgtgcgtttttggaagggttgtgggtttggctacaggtatacccgg
ttgcctcatctacttaaaaccaaacccgaggatgccaccctacccagccttcagaagccc
tgtccatcactcctgctacagaggcacatggcggagctgctgagacacgataaagacatg
gctgccagctttctgaacagtgttctcaaccagctcaactgggccttctcggagttcatc
ggcatgattcaggagattcagcaggctgcagagagaccagagcgaaactttgtggacaca
cggcagctaaaggtttgtgccacctgcttcgatctgtctgtcagccttctacgtgtgctg
gagatgacggtcactttggtgccagagatatttctagactggtctcgcccctcagctgaa
ctgttactgcgacgattggctcagctgctcaaccaggtgctgaaccgtgtgactgctgag
aggaatctctttgaccgtgtagtcaatctgcgtctcccaggactggagagtgtggaccac
taccctatacttgtagctgttacaggcatcctggtgcgcatcttagtggagagtgacaga
cagggagttgcaagggcagcatctgtactcctttcagacccctgtttccagctccactct
atccagcacctgcttggagagggagaagccagtgcagctggaactgaccgcaagcacttc
tctctgcatgcctatgctgattacatcagtgcagaggaggaacagaaggtggaacagatg
ttggcctttctgacagaggaatctaagcaggcagcagcctgtacagcacccactagcgag
gaggacctgtgtcccatctgctatgcacactcaatctctgccatcttcaagccctgctca
cacaagtcttgcaaagcctgcatcaatcagcatctgatgaacaacaaggactgcttcttt
tgcaaggctaccattacaggtgtggaggattatgtcaagccactggggtcttag

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