KEGG   Alosa sapidissima (American shad): 121708679
Entry
121708679         CDS       T11137                                 
Symbol
kdm6bb
Name
(RefSeq) lysine (K)-specific demethylase 6B, b
  KO
K11448  lysine-specific demethylase 6B [EC:1.14.11.68]
Organism
asad  Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:asad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:asad03036]
    121708679 (kdm6bb)
Enzymes [BR:asad01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     121708679 (kdm6bb)
Chromosome and associated proteins [BR:asad03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121708679 (kdm6bb)
SSDB
Motif
Pfam: JmjC KDM6_C-hel KDM6_GATAL
Other DBs
NCBI-GeneID: 121708679
NCBI-ProteinID: XP_041947407
LinkDB
Position
5:11224260..11273110
AA seq 1919 aa
MYHTAEQSSGRNTWDSFPSAGLNRPPWAPMTSRHWARPSSGGIYQSHHPSQNHMAGRNHP
SKAHNDRPMGPPGDRVPQHPQRDQRPSQPWESRYESHGPRRNPEYPSGTYGMGPGGHLSS
SSGHNQPPRYGGPPAVERWSQASPSRLFPENASAGTLKRPAPSHPEMAGVQRGSPQRHSL
PPRDDCPRKKSKYTSSEQAFRPRMKHFPGPSQPPPRPRSHGSPTWSPPYRSGGPWTQANR
RSSPADYQEPSKSDMNGHSHRGHPYPLDTPLPHCAPPQGFHSSKHPSQGYLHHPRPQPHH
NHHPHTSHSHHPPSSSSSSSSQHGHSRPPQRGPKGASDHRQAPSSPADSTSVPYSPTPHH
LRHSQPPPPPHTPPRRPAGDSSSSGLHAGAPHQQQRSVRTPPREEGKAQARHGKHTPEHG
NHGVERDQQHGRVSIRHSTTPTITTTTTSSLSPKSLHPPSSTEATRKAEDSQRGTWSKSP
ITPSSERARPPSPASPPLPSPQSPPVTEQHQESPNPTPPSPAMKDSDPTSHRPSSPLADS
NTRGERSKGKVTPSSSYQSGSSGVEQRDAGAALDTEASKRTRPEKRPREERRRKRRSERK
EAGERKMEEEEKKKRREREEKRGEKEGRSLSRKGEEGKARKLKSKSGKQEGKMEKKSSKT
ERLEQRGKKETSESPRKRCAEMAATAKPRPAAVDQHAPPSQSSANHTLTATASHKKPKQK
ERGSRGGVASQHQPITANTSGLALPHRAPLANHNSALPPHSSKDATPKRAREGPRLPVRD
SSQTSNSMKAPRHPIISESSSEVPTNCPPFTPDPSSGGAEERPALPRPEAPELQLAMGAC
SDDDLGKEPPGSPPILSLQGSPVSVLSDEDEEDEMTKEEKIILCRPVLQPSPTSSPVYPS
SPCKVAAIVPADDTRAETGTDLRHSDLAKLYGITALPKEMEEDEAEEEEAEQKDSSSSAG
DTSGSQTPRRPHLHQTGLGDMFKSLASILGNHRYTYRGGPFGRPPPNALVGLKYSSSLSL
GSEIHCQEPPSASTTLANQTTSGQTPPPQPQSEPTSDEERDSKKLLLEERPENSGKPKTD
HDQVDNPDSEKESLQLSPKKVSEGRVKKSSNHSKLNHNCDNDLASQPGASAVTSSKVTQE
KERRGEKKKEKRAEETSKQIRKERDGAKCQKKEEKERESSVKRKRETTKADEQKERKKPK
VKIEGENKALSISSCPSKTAPVGPSKQSKENKTSSKATDDTNRQCKEEKVRKVREKTQAG
SGDKTEPHPAEKKSEEQEKVEASTTISNSITSAAKAATVASVSLSSSVSASSTISITTTT
AMAASTPTTNTSTSTSTSTSTSTTTRFPGGLGRADFLKLQALSIGPPKELKIRLIKVESG
ERSTFIASELEKKRVPLSEISIKNKAEEVISACKSACVKGKFRESYLLPAFSVKPVLSTE
TPIPREKLNPPTPSIYLESKRDAFSPVLLQFCTDPKNPVTVIRGLAGSLRLNLGLFSTKS
LVEANAEHAVEVRTQVQQPADENWNPSGSAQTWPCESSRSHTTIAKYAQYQASSFQESLQ
EEKDSEDEDEEEKKTSSTGSASNPTSGVTNGSSDQKPTGKIIKFGTNIDLSDPKRWKPQL
QELLKLPAFMRVSSSGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIG
PGDCEWFAVHEHYWEAINDFCEKHGVDYLTGSWWPVLEDLYRSNIPVYRFIQRPGDLVWI
NAGTVHWVQAVGWCNNIAWNVGPLNSYQYQLALERFEWNEIKKVKSIVPMIHVSWNVART
IKITDPDTHKMVKHCLLQSMKQIQILRDQLLALGKKISYQSRVKDEPAYYCNECDLEVFN
LLFVTSESSNRKTYVVHCEDCARQRSPNLAGVVILEQYRIDELMTIYDSFTVAPLPCSK
NT seq 5760 nt   +upstreamnt  +downstreamnt
atgtatcacacggcagagcagtcgtcaggccgtaacacatgggactcctttccctcggcc
ggactcaaccgaccaccatgggcaccaatgaccagtcgacactgggctcgcccctccagt
gggggaatctaccaatcccatcatccctctcaaaatcatatggcaggaaggaaccatcca
agcaaagctcacaatgaccggcctatgggtccccctggtgaccgtgtcccccagcatccc
cagagggaccagagaccttcccagccctgggagtcccgctacgagtcccacggcccgcgg
aggaaccctgagtaccccagtggcacttacggcatggggccaggaggccacctgtccagc
tccagtggccacaaccagcctccacggtatgggggtcccccggcggtagagagatggtcc
caggcttccccatcccggctcttccccgagaatgcttcggcgggcaccctgaagcggccg
gcgccctcccaccctgagatggctggagtgcagcgcggctccccccagcgccactcgctg
ccccctcgcgatgactgccccaggaagaagagcaagtacaccagctctgagcaggctttc
cggccccggatgaaacacttcccgggtccgtcccagccgccgccgcggccgcgctctcac
ggctcccccacctggagccccccttaccgcagcggcggcccctggacgcaggccaaccgt
cggagctccccggcagactaccaggaacccagtaaatcagacatgaacggccactcccac
agaggccatccataccccctggacactccactgccccactgtgccccaccccagggcttc
cactccagcaaacacccctcccagggctacctccaccacccacgaccacaaccccaccac
aatcatcacccccacaccagccacagccaccacccaccctcctcctcctcctcctcctcc
agccagcacggccacagccgccccccgcagcgaggacccaaaggagccagtgatcaccgc
caggccccctcctcaccagcagactccaccagcgtgccttacagtcccaccccacaccac
ctccgtcactcccagccacctccacccccacacaccccaccacggaggcccgcgggcgac
agcagcagcagtggtctccatgctggagccccacatcagcagcagcggagcgtgcgcacg
cccccacgggaggaagggaaagcacaggcacggcatggcaagcacaccccggagcacggc
aaccacggtgtagagcgggatcagcagcacgggagggtttccatcagacacagcaccacc
cccaccataaccaccaccaccacctcatctctctcccccaaatctctccacccgccctcc
agcacggaggccacgcgcaaggctgaggacagccagagaggcacttggtccaaatctccc
ataacgcccagcagcgagagagcaaggccaccttcaccggcctcaccgcccctgccatcg
ccgcaatcaccgccagtcacagagcagcaccaggagagcccaaacccgaccccaccgtca
cccgccatgaaggattcagaccctacctcccatcgtccctcctccccactcgctgactcc
aacacccggggtgagaggtcaaaaggtaaggtcactccgagctcttcttaccagagcggc
tcttctggtgttgaacagagggacgcaggggctgcgctggacacagaggcgagcaagcgc
acccgcccagagaagaggcctcgcgaggagagacgccggaagaggaggagcgagagaaag
gaggcaggggagaggaagatggaggaggaggagaagaagaagaggagggagagagaggag
aaacggggggagaaggaggggagaagcttgtcccggaagggagaggaggggaaagccagg
aagctgaagagtaaaagtgggaagcaggaaggcaagatggagaagaagagctcgaagaca
gagagactggagcagagagggaagaaagaaacctctgagtctccacggaaacgctgtgca
gaaatggcagcgacagccaagccacgacccgccgcggtcgaccagcatgcaccgcccagt
cagtcatcagccaatcacacgttgactgccacggcgagtcataagaaacccaagcaaaaa
gagaggggcagtaggggcggggtcgccagtcaacaccagccaatcactgcaaatacctca
gggttggccctcccccacagagcaccactagccaatcacaacagcgccctgccaccacac
tcatccaaagacgccacccctaaacgggccagagagggaccacgtctccctgtgagggac
tcttctcaaaccagcaacagtatgaaagccccgaggcatccaatcatcagtgaaagcagc
tctgaggtacccactaactgccctcccttcaccccagacccatccagcggcggggcagag
gagagaccggcactcccccgcccagaagccccggaactccagcttgctatgggggcctgc
agcgacgacgacctgggcaaggagcccccgggcagccccccgatccttagcctgcagggc
tcccctgtgtccgtgctgagcgatgaggatgaggaggacgagatgaccaaggaggagaag
atcatcctgtgccggccagtgctgcagccaagcccgacgtccagccctgtgtacccatcg
tcgccctgcaaagtcgccgccatcgtcccagcagacgacacgagggccgagacgggcacg
gacctccgccacagtgacctggccaagctgtatggcatcacagccctgcccaaggagatg
gaggaggatgaggctgaggaagaggaggcagagcaaaaggacagcagcagcagcgctggg
gacacgtccggctctcagactccgcgccgtccgcacctgcaccagacgggccttggggac
atgttcaagtctctggcctccatcttggggaaccacaggtacacgtaccgggggggcccg
ttcgggcgtccgccacccaacgctctcgtcgggctgaagtactcctcttctctgtccctt
ggctccgaaatccactgccaggaaccaccgagcgcgtccacgacgctcgccaaccagact
acctcaggacagacacctccacctcaaccacagtcagagcccacatcagacgaagagaga
gactcgaagaaactcttgctggaggaaagaccagagaattctgggaagccgaagacagat
cacgaccaggttgacaatcccgactcggagaaagagtccttgcagctgtcccccaagaaa
gtttcagaggggagagtgaagaagtcttcaaaccacagcaagctgaaccacaactgtgat
aatgacttagcgagccaacctggcgcctccgctgtgaccagcagcaaggtcacacaagag
aaggagaggagaggagagaaaaagaaagagaaaagagctgaggaaacgagcaaacagatt
aggaaagaacgagacggagcgaagtgtcagaagaaagaggagaaagagcgagagagtagc
gtgaaaaggaaacgagagaccacaaaggcagatgaacaaaaggagaggaagaagccaaaa
gtgaagattgagggagagaataaagctttgagtatttcctcttgcccatcgaagactgcc
cctgtgggtccctcgaaacagtctaaggagaacaagaccagctctaaggctactgacgac
accaaccgccagtgcaaagaagagaaggtccggaaggtccgcgagaagacccaagctggt
tctggggataagacagaaccgcatcctgctgagaagaagagcgaagagcaggagaaggtg
gaggcatccaccaccatcagcaactccatcacctcagcagccaaagcagcaaccgttgca
tcagtgtcattatcatcatcagtatcagcatcatccacaatatcaataactacaacaaca
gcgatggcagcttccactccaaccacaaacacctccacctcaacctccacctccacctcc
acctccaccaccacccgcttccccggaggtctgggcagggcagacttcctcaagctgcag
gccttgtccatcggtccccccaaggagctaaagatccgcctgatcaaggtggagagcggc
gagcggagcaccttcatcgcctctgagctggagaagaagagggtcccgctgtcggagatc
agtattaagaacaaggccgaggaggtcatcagcgcctgcaagagtgcgtgtgtgaagggg
aagttccgtgagtcctacctgctccctgctttctcggtgaagcctgttctctccactgaa
acccctattccccgggagaagctcaacccccccacgccaagcatttatctggagagtaag
agggatgccttctcccccgtgcttctgcagttctgcaccgatcctaaaaacccagtcact
gtcatcagaggcctggcagggtctctacgcctcaacctgggcttgttctccaccaagtcc
ctggtggaggccaacgcggagcacgcggtggaggtgcgcacgcaggtgcagcagccggcc
gacgagaactggaaccccagcggctcggcgcagacctggccctgcgagagcagccgctcc
cacaccaccatcgccaagtacgcccagtaccaggcctcaagcttccaggagagcctgcag
gaggagaaggacagtgaggatgaggatgaggaagaaaagaagacgtcttccaccggctct
gcatccaacccaacctctggagtcactaatggcagctctgaccagaagccaactggaaag
atcatcaaatttggcaccaacattgacctctcggatccgaagaggtggaagccccagctc
caggagctgctgaagctgccggccttcatgagggtgagctccagcgggaacatgctgagc
cacgtgggccacaccatcctgggcatgaacaccgtccagctctacatgaaggtgcctggg
agccgcacgccaggtcaccaggagaacaacaacttctgctccgtgaacatcaacatcggc
cctggagactgtgagtggttcgctgtccatgaacactactgggaggccatcaatgatttc
tgtgagaagcatggtgtggactacctgaccggctcctggtggccagtgctggaggacctg
taccggtccaacatccccgtgtaccgcttcatccaacggcccggagacctggtgtggatc
aacgccggaaccgtccactgggtgcaggccgtgggctggtgcaacaacatcgcctggaac
gtcggcccgctgaactcgtaccaataccagctggccctggagcgcttcgagtggaacgag
atcaaaaaggtcaagtccattgttcccatgatccacgtgtcctggaatgtggcccgcaca
atcaaaataacagacccagacacgcacaaaatggtcaagcattgcctccttcagtctatg
aagcagatccagattctgcgagaccagctgctcgccttgggcaaaaagatctcctaccag
agccgcgtgaaggacgagcccgcctactactgcaacgagtgtgacttggaggtgttcaac
ctgttgtttgtgacgagcgagagcagcaacaggaagacgtatgtggtgcactgtgaggac
tgcgcccgccagcggagccccaacttggccggggtggtcatcctggagcagtaccgcatc
gacgagctcatgaccatctatgacagcttcaccgtggctcccttaccttgctccaagtga

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