Alosa sapidissima (American shad): 121708832
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Entry
121708832 CDS
T11137
Symbol
nectin4b
Name
(RefSeq) nectin-4 isoform X1
KO
K06593
poliovirus receptor-related 4
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
asad04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
121708832 (nectin4b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121708832 (nectin4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asad04515
]
121708832 (nectin4b)
Cell adhesion molecules [BR:
asad04515
]
Immunoglobulin superfamily
Nectin family
121708832 (nectin4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
Ig_2
ig
C2-set_2
RIFIN
Protocadherin
ECSCR
DUF4381
V-set_CD47
LapA_dom
DUF1069
Adeno_E3_CR2
DUF948
EzrA
Motif
Other DBs
NCBI-GeneID:
121708832
NCBI-ProteinID:
XP_041947689
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All DBs
Position
1:complement(16601275..16732869)
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AA seq
595 aa
AA seq
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MLRSVMSRRLCLLVNILVCVYGGFVEPPESFSLRSVAESETRLPCRFDPQEGESVVQVNW
NKKQADGNSEVIITAHHTEGTVVGRLATRVRFQSQDPLRDSSLLILNTEMSDEGHYTCQV
ITFPSGTSQRPISLTVWTIPISLLEPMILEEGQTFRVAALCRSTAHPPPTLSWDTDLPGQ
SQNRTGEGGRVSSQFALHPLRNMNGRKLDCLVSHPTLERPHRLRNTLVVHFPPNAVISGY
DGNWFVGQESVELTCEFGGNPKVENITWTRRGGDLPEDVSAEGSRLVFGRPLVATDAGVY
ECEARNRMGADKGELQVTVREVRLPEPVVDTFPTIIVAGVAGAIVVIMVIVIIIVIHHHR
RKNRMLKRELCERTEEINNISRQTSLRRLNSTSTDIRSQMDDMFVVTKNSISLEECSALR
QPPGGVSEQELDSLGRPPIYSSFQHASDNYSWREKQREESKRRVESYLKNSDHSLDSGLH
SSLVPPLTSEAPLLESQSHSPSGGTEGEMQPWTSREGVVDGQADGWSPQVRVVDGRTEGW
LQRERVAEGVDEDDDATSSVQISEALSNHFHYSNGFLRPKPHPNAIILHPRGQIV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgctccgaagtgtcatgagcagaaggctatgccttctggtcaatattctggtttgtgtg
tacggagggtttgtggaaccgccggaatctttctccctgcggtcggttgctgagtcggag
acccggttgccatgccggttcgaccctcaggagggagagagtgtcgtgcaggtgaactgg
aacaagaagcaagcagatggaaactccgaagtcatcatcactgcccaccacacagaggga
acagtggtgggccgcttagctacacgagtgcgtttccagtcacaggacccgttgcgcgac
tcctctcttctcatcctcaacactgagatgtcagatgagggacactacacatgccaggtc
atcaccttcccttctggaacctcccagaggccaataagcctcaccgtctggacaataccc
atctctttattggagcctatgattttggaggaggggcaaacatttcgagtcgccgccctt
tgtcgctctacagcccacccaccacccactctctcttgggatactgacctccctggccaa
tcacagaacaggacgggcgagggtgggcgtgtctcttcccagtttgccctgcatcctttg
cggaacatgaatggcaggaagctggactgcctagtgagccaccccactctagagcgcccc
caccgcctcaggaacacactagtagtgcattttcctcctaatgctgtgatcagtggttat
gatgggaactggtttgtcggacaggaaagcgttgaactcacctgtgagtttggaggaaac
cccaaggtagaaaacatcacctggaccaggagaggtggagatctaccagaagatgtatct
gccgaaggaagccggcttgtctttggtaggccgctagtcgcgacggacgcaggtgtctat
gaatgcgaggccaggaaccgcatgggggcggacaaaggagagctgcaggtgaccgtgaga
gaggtgcggttgcctgagccagtagtcgacaccttccctacaatcatcgtggccggggtt
gctggagccatagtggttattatggtgattgtcatcatcattgtgatccatcaccataga
cgcaagaacaggatgttgaagagggagctttgtgagagaactgaagaaattaacaatata
tcaagacagacctcgttaaggagactaaactctaccagcacagacattagaagtcagatg
gatgatatgtttgttgtgactaaaaacagtatatctctggaggagtgttctgccctacgc
cagccaccagggggagtgtctgagcaggagctggacagtctgggccgcccccccatttac
tcgagctttcagcacgccagcgacaactactcctggagagagaaacagagggaagagagc
aagcgccgtgtggagagctacctcaaaaacagtgaccactctctggactctgggcttcac
tcctccctggttcctcctctgacttcagaggccccgctgctggagtcccagagccatagc
ccctcgggggggacggagggagagatgcagccctggacctccagagagggggtagtggac
ggacaggccgatgggtggtctccgcaagtaagggtggtggatggccggacggagggttgg
ctgcagagagagagggtggcagagggggtggacgaggacgatgacgcaacaagctcagtc
cagatctctgaggcgctgtccaatcacttccactacagcaatgggtttctgcggcccaaa
cctcaccccaatgcaattatactgcaccctcgagggcaaatcgtataa
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