Alosa sapidissima (American shad): 121710750
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Entry
121710750 CDS
T11137
Name
(RefSeq) toll-like receptor 2 isoform X1
KO
K10159
toll-like receptor 2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04145
Phagosome
asad04620
Toll-like receptor signaling pathway
asad05132
Salmonella infection
asad05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121710750
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121710750
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121710750
09171 Infectious disease: bacterial
05132 Salmonella infection
121710750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121710750
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asad04147
]
121710750
04054 Pattern recognition receptors [BR:
asad04054
]
121710750
04090 CD molecules [BR:
asad04090
]
121710750
00536 Glycosaminoglycan binding proteins [BR:
asad00536
]
121710750
Membrane trafficking [BR:
asad04131
]
Endocytosis
Phagocytosis
Toll-like receptors
121710750
Exosome [BR:
asad04147
]
Exosomal proteins
Exosomal proteins of breast milk
121710750
Pattern recognition receptors [BR:
asad04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
121710750
CD molecules [BR:
asad04090
]
Proteins
121710750
Glycosaminoglycan binding proteins [BR:
asad00536
]
Hyaluronan
Cell surface receptors
121710750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_1
LRR_9
LRR_NXF1-5
LRRCT
DUF3736
Motif
Other DBs
NCBI-GeneID:
121710750
NCBI-ProteinID:
XP_041950084
LinkDB
All DBs
Position
1:complement(36357749..36373468)
Genome browser
AA seq
798 aa
AA seq
DB search
MLSSPLISVREENKMFVLLTLLTLSWGWCVSPHPRPKCDRCNENFVCDCSSLNLQEVPAI
STTSVISLDLSFNEIKTIGQDDFFVYSNLHVLILRGNMISSIAEQGFSTLRKLEVLDLSD
NQLNGLSEMWFKSLSSLHHLNLLGNEYKTFGGKTLFRSMTQLSTLMVGNQFLASVSKDSF
IGPNHLQSFVFHGSNLQNYQPGSFSQINSIDEVTVSINGPFQINTSLTTDILRDLSRPET
KIILSDLRISWQQLKPFQVIFQNGVKKILLRNLSCSLDTIIPLYGMTQHSLLTSIGLEDC
EFSGEPNNITVHFPVLDFVDEFYFRNIQLDQFYNFPAFHSIDPLIQVLMRLKRVSIIESN
VFAMPHITTFLLKNLEYMDMSRNQFTDLTLREALCDGQIYPCLLSIKVFNISSNYIRSFD
TLSHLFRGMKKLAALDVSLNVFRTMPLICVWPQSLRYLNLSSCQLRGVTSCLPQTLDILD
LSYNDLMVFHQNMPNLTELHLSGNRFKTLPEGKLFDRLVVLYIKSNPFIFFSQNQMRNFG
GLRILEAGTDTYVCSCEFVNFFNHELGHLVSLKDGRQAYICSSPFALRGTKVSDAQLSVF
KCHAALAFSALCVFVLVVVIGAMVMCHKLHMIWYVRMTWAWLQAKRRPVARKDQVCYDAF
VSYSESDAEWVEELLVPELEGAQPPFRLCLHKRDFLPGGWIADSIMAAMEKSHKILFIVT
QHFVQSDWCRLELEYSHFRLFDAGILILLEPIPDSTIPKRFCKLRKVMNSRTYLEWPEED
NERPRFWQSLKDTLHMAE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgctctcaagtcctcttatatctgtcagggaggagaacaagatgtttgttttactcact
ctactgacactcagctggggttggtgtgtgtcccctcacccaagaccaaagtgtgatcga
tgcaatgaaaactttgtttgtgactgctcttctttaaatctacaggaagtccctgctatc
tccacaacatcagtcataagcctggacctctcctttaatgaaatcaagactataggtcag
gatgacttctttgtgtacagtaatctacatgtactgattctgaggggaaatatgatatcc
tcaattgcagaacaaggtttctcaactctcagaaagttggaggttttggacttgtcagat
aatcaattaaatggtttgtctgagatgtggtttaagagtctctcctcccttcatcatcta
aatcttttgggaaatgagtataaaacatttgggggaaagactctgtttcgctcaatgaca
cagcttagtactctaatggttgggaatcaatttcttgcctcagtttccaaagatagcttt
atcggacccaaccatcttcagagctttgtgtttcatggcagcaatttgcagaactaccaa
ccaggtagcttcagccaaatcaactccattgatgaagtcactgttagcatcaacggtcca
tttcagataaacacaagtcttacaacagacatcttgagagacctttcacgtcctgagacc
aaaatcatcttgtcagatttgagaatcagctggcaacaactgaagccttttcaagtgatc
tttcagaatggtgtcaaaaaaatcctcttgagaaatctaagctgcagtcttgataccata
attcccctgtatggaatgacccagcactcactgctgacctctattggactggaggattgt
gagttctctggagagccaaataatattacagttcacttccctgtacttgactttgttgat
gagttttacttcagaaatatacaactggatcagttctataacttccctgcattccacagc
atagacccactaatacaagtcctcatgcgcctgaaaagagtgagtataattgaaagcaat
gtctttgcaatgcctcatataacaacattcttactgaaaaatcttgaatacatggatatg
agcagaaatcaattcactgatttaaccttgcgagaagctctctgtgatggacagatatat
ccgtgcttactctctattaaggttttcaatattagcagcaattatattcgttccttcgac
accctgagccacctcttcagaggaatgaagaagctggctgctcttgatgtgagcctgaat
gttttccgcactatgcccctgatctgtgtctggccccagtctctccgctacctgaatctc
tcctcatgtcagttaagaggagtgacctcatgtctcccgcagactctagatatcctggat
ttgagctataatgacctgatggtatttcatcaaaacatgccaaacttgactgagctccat
ctatctggaaacagattcaagaccttaccagaggggaaactctttgaccgcttggtggtg
ctctacatcaagagcaaccctttcatattcttcagtcaaaaccagatgaggaactttggt
gggctcaggatcttggaggctggtacagacacgtatgtgtgctcttgtgaatttgtgaac
ttcttcaaccatgaactcggtcatttagttagtttaaaggacggtaggcaggcatacatc
tgcagttcaccatttgcactgagagggacaaaagttagcgatgcccaactctctgttttc
aagtgccatgcagcgttggccttctctgccctgtgtgtgtttgtgcttgtggtcgtcatt
ggtgccatggtgatgtgtcacaagcttcacatgatttggtacgtccgaatgacatgggca
tggctgcaggccaaacggaggcctgtggcccgcaaggatcaggtgtgctatgacgccttt
gtgtcctacagtgagagcgatgcggaatgggtggaggagctgctggtgccggagctggag
ggcgcccagccgccattccgcctctgcctgcacaaacgtgacttcctgccagggggctgg
attgcggacagtatcatggcggccatggagaagagccacaagattctttttatagtgacc
cagcactttgtccagagcgactggtgccgtttagagttggagtactcacacttccgactg
tttgatgcaggcatactcatcctccttgagcctatccccgactcaacaattcccaaaagg
ttctgcaagctgcgcaaggtcatgaactcaaggacctatctggaatggccggaggaagac
aatgaaagacccagattctggcagtctcttaaagacactttacatatggctgaataa
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integrated database retrieval system
