Alosa sapidissima (American shad): 121716137
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Entry
121716137 CDS
T11137
Symbol
pbx3b
Name
(RefSeq) pre-B-cell leukemia transcription factor 3b isoform X1
KO
K15610
pre-B-cell leukemia transcription factor 3
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121716137 (pbx3b)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121716137 (pbx3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
DUF7260
ANF_receptor
HTH_NDX
TraG-D_C
EF-hand_2
LZ3wCH
UCH
Motif
Other DBs
NCBI-GeneID:
121716137
NCBI-ProteinID:
XP_041958274
LinkDB
All DBs
Position
8:32471200..32522711
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AA seq
471 aa
AA seq
DB search
MDEQARIMQALGGVNLAGHPVQGGMTLPPPHGHDGTDGDGRKQDIGDILHQIMTITDQSL
DEAQAKNRKHGLNCHRMKPALFSVLCEIKEKTGLSIRGAQEEEPPDPQLMRLDNMLLAEG
VAGPEKGGGSAAAAAAAAASGGAADNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTT
HVMNLLREQSRTRPISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKR
RNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQGVGSTITVSQVSNWFGNK
RIRYKKNIGKFQEEANLYAAKTAVNAAHAVAAAVQNSQTNSPSTPNSGFQMKDEEFQLDS
AENKNTLLTNMFTGSSGSFSLPQSGDLFMSMQGLSAAPYQGTQVGANVQSQVDTLRHVIS
QTAGYSDGLGGNSMYSPHGLNTNGGWQDATTPSSVISPTEGPGSVNSDTSN
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcaagcccggatcatgcaggctctcggcggggtgaatttggctggccacccg
gtgcagggaggcatgactctgccgcctccacacggacacgacgggaccgatggagacgga
agaaaacaagacatcggtgacattctgcatcagatcatgacgataactgaccaaagtctg
gacgaggcgcaagcaaaaaacaggaaacacggactgaactgtcaccggatgaagccagcc
ctgttcagcgtgctctgcgagattaaagagaaaaccggtctgagtatccgtggggcgcag
gaggaggagcctccggacccccagctcatgcgattggataacatgctgctggcggagggc
gtggccggtccagagaaagggggcgggtcagcggcggcggcagcagcggcggcagcgtcg
ggcggagcggccgacaactccatcgagcactcggactacagggccaaactcacgcagatc
cgacagatctaccacacagagctggagaagtacgaacaggcatgtaacgagttcaccacc
cacgtgatgaacctgctgcgggagcagtctcgcacgcggcccatctcgcccaaagagatc
gagcgcatggtgagcatcatccaccgcaagttcagctccatccagatgcagctcaagcag
agcacctgtgaggccgtcatgatcctgcgttcacgcttcctcgatgccagacggaaaaga
cggaacttcagcaagcaggcgacggagatcctgaacgagtatttctactcgcacctcagc
aacccgtaccccagcgaggaggccaaggaggagctggccaagaagtgcagcatcacagta
tcccagggggtgggaagcaccatcacagtgtcccaggtatctaactggttcgggaacaag
cggatccgctacaagaagaacatcgggaagttccaggaagaggcgaacctctacgccgcc
aagacggccgttaacgctgcccacgccgtagccgccgccgtgcagaacagccaaaccaac
tcaccctccacgcccaactccggcttccagatgaaagatgaggagttccagctggactct
gccgagaacaaaaacactcttttaaccaacatgtttactggttcctcagggtcttttagc
ctcccacaatctggggacttgttcatgagcatgcagggtctgagtgcggccccttaccaa
ggcacacaagtcggagccaatgtgcagtctcaggtggatactctgcgccatgttatcagt
cagacggcaggatacagtgatggcctcgggggaaactccatgtacagtccacatggcctg
aatacaaatgggggctggcaggatgcaactacaccatcctctgttatctccccaaccgaa
ggaccaggcagcgtgaactctgatacctcgaattga
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