Alosa sapidissima (American shad): 121718710
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Entry
121718710 CDS
T11137
Symbol
socs6b
Name
(RefSeq) suppressor of cytokine signaling 6b
KO
K04699
suppressor of cytokine signaling 6/7
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asad04121
]
121718710 (socs6b)
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121718710 (socs6b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SH2
SOCS_box
ODAM
Motif
Other DBs
NCBI-GeneID:
121718710
NCBI-ProteinID:
XP_041959738
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Position
1:32007956..32013980
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AA seq
523 aa
AA seq
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MKKISLKTIRKSLNLKGKDENEFAAPSTLAASFAVEDSLFGGCYSKDLVNSDFDNEEEKG
PKNRSKSESLMGTLKRRLSTKQKVKVKGSSPSVSSVDDDTFSSSSAPITFSDLKSQPSLR
SSVRNHHYSPTPWPLRPANSEETCMKMEATVNALIHSSGASPALNGVRKDYLEFPRDGLF
KESSDSLKDPEPQNGDLHLDIDENVPVVIGLAAQDYIQYTMPLDDGLYSEDGSRSFCLDG
MSPMEVGPQSDRCSLDADEDPIDQELMSPDLFMEPSVNRLLLNTANVLLQGSQLEAPLSP
PLPPLSGSLLQRTLPAFGGTHAQVAERVMHHLNFDPNSAPGVRRVYDAVQNSGHMVVTSL
TVELKKLAKQGWYWGPITRWEAEEKLTNLIDGSFLVRDSSDDRYLLSLSFRSQGKTLHTR
IEHSNGSFSFYEQPDVEGHTSIVDLIEHSIKDSESGAFCYSRSRLPGSATYPVRLTNPVS
RFMQVRSLQYLCRFVIRQYTRIDLIQKLPLPNKMKDYLQEKHY
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagataagccttaagaccataagaaagtcactaaatttaaaaggcaaagatgaa
aatgagtttgctgcaccgtcaacactggcagccagttttgcagtggaagactccctgttt
ggaggctgttacagcaaagatcttgttaatagtgactttgataatgaagaggagaaaggg
cccaagaatcgctccaagagtgagagcctaatgggcaccctgaaaaggagactgtctaca
aaacagaaggtcaaagtcaaagggagttcaccgtctgtaagttctgtagatgacgacaca
ttctcatcatcctccgcacccattacatttagtgacttaaaatcccagccctcattgcgg
tcctctgtccgaaaccaccattacagcccgaccccttggcctcttagaccagcaaactct
gaagagacgtgtatgaaaatggaagccacggtgaacgcattgatccattcatccggcgcg
agccctgcacttaatggtgttcggaaagactacctggaatttcctagggatggactcttt
aaagagtcaagtgactcgttgaaggatccagaacctcagaatggagaccttcatctagat
attgatgaaaatgtgcctgtagtcatcggccttgcagctcaggactatatccagtacaca
atgcctttagatgatggactgtactctgaagatggctctcgctctttctgcctggatggc
atgtcacctatggaggtagggccacagtcagatagatgctctcttgatgcggatgaggac
cccatcgaccaggagctgatgtccccagacctcttcatggaaccgtcggtgaacagactg
ctgctcaacacggccaacgttctgctgcaaggctcgcaactcgaagcccccctctcacct
cctctacctccactgtcgggcagtctcctccaaaggaccttacccgcatttgggggcacc
catgctcaggttgctgagcgggtcatgcaccacctcaactttgaccccaactcagcccca
ggcgtgcggcgggtctacgatgccgttcagaacagcgggcacatggtggtgacgagtttg
accgttgagctgaagaagctggccaaacagggttggtactggggaccgatcacccggtgg
gaggcggaggagaagctgaccaacttgatcgatgggtccttcttggtgcgggacagctcg
gacgaccgctacctgcttagcctgagcttccgctcccaaggaaagacactccacaccaga
atagaacactccaacggcagtttcagcttctatgagcagccggatgtagagggacacacg
tccattgtggatctcattgaacactcgataaaggattctgagagcggagccttctgctac
tccaggtcacgcctacccggatctgcgacctaccccgtcagactgaccaatcccgtgtcc
cggtttatgcaagtgcggtctctgcagtatctctgccggtttgtcattcgccagtacaca
cggatagacctgatccagaaattgcctttaccgaataagatgaaagattacttgcaggaa
aagcactattga
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