Alosa sapidissima (American shad): 121720401
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Entry
121720401 CDS
T11137
Symbol
tlr18
Name
(RefSeq) toll-like receptor 18
KO
K10159
toll-like receptor 2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04145
Phagocytosis
asad04620
Toll-like receptor signaling pathway
asad05132
Salmonella infection
asad05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
121720401 (tlr18)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121720401 (tlr18)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121720401 (tlr18)
09171 Infectious disease: bacterial
05132 Salmonella infection
121720401 (tlr18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121720401 (tlr18)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asad04147
]
121720401 (tlr18)
04054 Pattern recognition receptors [BR:
asad04054
]
121720401 (tlr18)
04090 CD molecules [BR:
asad04090
]
121720401 (tlr18)
00536 Glycosaminoglycan binding proteins [BR:
asad00536
]
121720401 (tlr18)
Membrane trafficking [BR:
asad04131
]
Endocytosis
Phagocytosis
Toll-like receptors
121720401 (tlr18)
Exosome [BR:
asad04147
]
Exosomal proteins
Exosomal proteins of breast milk
121720401 (tlr18)
Pattern recognition receptors [BR:
asad04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
121720401 (tlr18)
CD molecules [BR:
asad04090
]
Proteins
121720401 (tlr18)
Glycosaminoglycan binding proteins [BR:
asad00536
]
Hyaluronan
Cell surface receptors
121720401 (tlr18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_5
LRR_9
LRR_LRWD1
LRR_NXF1-5
ThsB_TIR
LRR_14
Motif
Other DBs
NCBI-GeneID:
121720401
NCBI-ProteinID:
XP_041962403
LinkDB
All DBs
Position
10
Genome browser
AA seq
837 aa
AA seq
DB search
MRGFMWTVAVMLPLVLEVYTVQKSKVAHFCSVSNDHRRADCRGQYLGHVPKESLPVSLEQ
VDLSHNILERIHNTDFSHLPHLKLLNLEYNNISVIEDDAFRFNSLLEDFNIFNNSLTVIP
NKALRNLTRLQNLEMSNNFYNEVALGEVFSTFTSLRKLSVGGPFVKELKKSNLIALKNLS
LFKFAFKSGPSLVKYEPGSLKFLKTKEMWFDVAMDNIPNELNVMLNDLANKSFDHLRFRN
LFEFVYYTGDGDIFQGLQHIRAQQIVFFRGKFNEKLLRMALINIQQSPIKELGLYNIDFA
RSPTFVDSGAGSSVTNLTLNHLVLSGISNPDILRFDWRFTWLKKIRRLSIWNINFNFVPC
DAWLEMGGVEVLNVSRNQLRDHYLFNRRCDYTGTMPVLHTFDVSFNQLTSLNDFASFAGE
FEGLQILDVSNNQLQTVDDSVCNWKQNISKLIAHHNALEVSSLRCLPTTVHFLDLSFCKL
DQLDVHYFQQAVNLRELLLSGNKIKFIPSGWKSPNLQYLSLDGNSFGLISMNSFKYMPSL
ATLRAGNNPYYCTCDLYTFIQKTTTNRRVNITDWPENYKCYYPEHLLNKMAAEFSPGRIA
CDMKLVILISVITTASVVIGIMAMCYCFDVPWYTKATFQIIRAKYRAHKEGLKPEQRYDY
HAFISYSHSDADWVRNQLLPCLESSRPPYRVCIHERDFTPGKWIIDNIIENIENSLKVIV
VLSQNFVDSEWCNYELYFAQQRAIGKTFSDVILVVKEPIDPNSLPSKYCKLKKMLSTKTY
LEWPQQPKHQGFFWAQLKSVLGKPSLPQTPQHQPGSDPDISSTANMSDTECSESIHL
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggattcatgtggactgtggctgttatgcttcccttagtgctggaggtctatact
gtccagaagtccaaggttgcgcatttctgctctgtaagtaatgaccaccgtagggctgac
tgccgtggacaatacctgggtcatgtacccaaggagagtctacctgtttcacttgagcag
gtggatctctctcacaacatccttgagaggatccacaacacagatttctcccacctgcca
cacttaaagttgctcaatctcgagtataacaacatctctgtcatcgaggatgatgccttt
aggtttaacagtcttctggaggacttcaatatttttaacaactccttgacggtcatcccg
aacaaggcactgagaaatctgactaggcttcaaaacttggagatgtcaaataatttttac
aatgaagtggctcttggagaggtgttctcaaccttcactagcctccggaaactctccgtt
ggtggaccttttgtcaaagaactaaagaagagcaacctcattgctttaaagaacctctca
ctcttcaagtttgcctttaaaagtggtccaagtcttgtgaagtatgagccaggttctctg
aaatttctaaagactaaagaaatgtggtttgatgttgccatggacaacataccaaatgag
ctaaatgttatgctaaatgatttagccaataagtcctttgatcatcttcgcttccgtaac
ctgtttgagtttgtttactacacaggagacggtgatatttttcaaggtttgcagcacatc
agagctcagcagatagttttttttcgtggcaaatttaatgagaagttgctaaggatggct
ttaataaacatacagcaaagtcccattaaggaacttgggctttataatattgactttgca
cgctctcctacatttgtggatagtggggcaggatctagtgtgacaaatctaaccttaaat
catcttgtgctatcgggtataagcaatcctgacattttacgttttgactggcgcttcaca
tggttgaagaagatacgcagactgtccatttggaatatcaacttcaattttgtgccctgt
gatgcttggctggaaatgggtggtgtggaggtactgaatgtctccagaaaccaactgaga
gaccattacctcttcaatagaagatgtgattacacaggcaccatgccagttcttcacacc
ttcgatgtcagctttaaccaacttactagtctaaatgactttgcatcatttgcaggagag
tttgaggggctccagattctagatgtcagcaacaatcaacttcaaactgttgatgacagt
gtgtgcaactggaagcagaatatatccaaactgattgcacaccacaatgctttagaagtt
agcagtttgaggtgtttgcccacaacagtgcattttctggatctctccttctgcaaactg
gatcagcttgacgtgcactattttcaacaagcagtcaatctaagagaacttctactcagt
gggaacaaaatcaagttcattccttccggctggaaaagtcccaatctgcagtacttgtct
cttgatgggaactcctttggcctcataagcatgaactctttcaagtacatgcccagctta
gccacactaagagcaggaaataacccatactactgcacttgcgatctgtacactttcatc
cagaagacgacaaccaaccgaagagtgaacatcaccgactggccggagaattacaaatgt
tactacccagagcacctgctgaacaaaatggcggctgaattcagtcccggccgcatagct
tgtgacatgaagcttgtaattctcatcagtgtaatcactactgcttctgtggtcattggc
atcatggcgatgtgctactgctttgatgtgccctggtacaccaaagcaacattccagatc
atcagagcaaaatatcgagcccacaaagagggacttaaaccagaacaaagatatgattac
catgcatttatttcctacagtcactcggatgctgactgggtgagaaaccagttgctgcca
tgcctagaaagctccaggcctccataccgtgtttgcatccatgagagggacttcacacca
ggaaagtggatcattgacaacataattgagaacattgagaacagtctaaaggttattgtc
gtcctttcacagaattttgtagacagtgaatggtgcaactacgagctctactttgcccaa
caacgagccattggtaaaaccttcagtgacgttatccttgttgtgaaagagcccattgac
ccaaactctttgccaagcaagtattgcaaactgaagaaaatgctaagcaccaagacttat
ctagaatggcctcaacagccaaagcaccaaggcttcttctgggctcagctcaagagcgtg
ttgggcaaacccagtctcccacaaactccccaacaccagcctggcagcgatccagacatc
tcttctactgcgaatatgtctgacacagagtgcagcgagagtatccatttatag
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