Alosa sapidissima (American shad): 121721264
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Entry
121721264 CDS
T11137
Symbol
si:ch73-22o12.1
Name
(RefSeq) poliovirus receptor homolog isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03266
Virion - Herpesvirus
asad04514
Cell adhesion molecules
asad04520
Adherens junction
asad05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
121721264 (si:ch73-22o12.1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121721264 (si:ch73-22o12.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121721264 (si:ch73-22o12.1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121721264 (si:ch73-22o12.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asad04515
]
121721264 (si:ch73-22o12.1)
04090 CD molecules [BR:
asad04090
]
121721264 (si:ch73-22o12.1)
Cell adhesion molecules [BR:
asad04515
]
Immunoglobulin superfamily
Nectin family
121721264 (si:ch73-22o12.1)
CD molecules [BR:
asad04090
]
Proteins
121721264 (si:ch73-22o12.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
C2-set_2
Ig_3
Ig_2
ig
I-set
C1-set
Motif
Other DBs
NCBI-GeneID:
121721264
NCBI-ProteinID:
XP_041963973
LinkDB
All DBs
Position
10:12656710..12726379
Genome browser
AA seq
502 aa
AA seq
DB search
MKMAIFISVVMFLSVQGALGQLIQVDPEVMSYPGQNVELPCKFVNPGSTQVSQVSWILEP
SDGERINIAVYHPTFGASYPDSPVTGRVTFIAPTLNTPSIRIADVKMTDEGRYICEYATY
PTGNAQGITNLVMLAKPKNSASHITVVAGDTPVVVARCASANGRPVSQIRWVTSVNGNAT
TLTTQESDNTVTLRSDYKLIPTPADNGKDISCVVEHRTQTKPESFPMKLAIEYPPMVSIV
GYDDNWYMGRTNVELTCQAKGNPIPTTVTWRTLTGHMPDTVQVTENKLKVLKVDETVNTT
FICEVRNRLGIGKNQVTVNVRDPPADPSNVGVVAGVVIGILLALLLVGALVAILVTHNRR
QQQQGYRGNQKSGAFDIKSRLFGSKASKNGGGPGNGPGNNNGPIYTYREGVSGGGLTEKS
ANHGLLSTTPTAQDILLSGEMDEAERKKFDELADEEDEERYDRFTAAGPILQLRHHDDQH
YLDDDMESQRDGSVISRTAVYV
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggccatcttcataagtgtcgtcatgttcctgtctgttcaaggggcactaggc
cagctcatccaggtggatccagaggtgatgtcatatccaggtcagaatgtggagctgccc
tgcaagttcgtcaacccaggaagtacccaagtgtctcaggtgtcgtggatccttgagcct
tcggatggcgaacgcatcaacatcgccgtgtaccaccccactttcggggccagctaccca
gactcgccggtcacgggcagagtgaccttcatcgcgccaacgctgaacacgccgtccatc
cggattgctgacgtcaagatgactgatgagggacgctacatctgcgagtatgccacctac
ccgactggcaacgcccagggcatcaccaacctcgtcatgctcgccaaacccaagaactcg
gcgtcccacataacggttgtcgcaggcgatacgccggtggtggtggctcggtgtgcgtcc
gctaacggccgcccggtgtctcagatacgctgggtgacgtcagtcaatggcaacgccacg
acattgaccacacaggaaagcgacaacacggtgactctccgcagcgactacaaactgatc
cctacgcccgctgacaacggcaaggacatcagctgcgtggtggaacatcggacacagacc
aagcccgagagctttcccatgaagctcgccattgagtacccccccatggtgtccatcgtg
ggctacgatgataactggtacatggggcgcaccaacgtggagctcacctgccaagccaaa
ggcaaccccatccccaccaccgtcacctggagaacgctgaccggccacatgccagacacc
gtccaggtcacagagaacaagctgaaggttctgaaggtggacgaaaccgtcaacaccacc
ttcatctgcgaggtccgcaaccgattgggcatcggcaaaaaccaggtcaccgtcaacgtc
agagatccccctgctgacccatccaatgttggggtggtagcgggcgtagtcatcggcatc
ctcctggccctcctattggttggtgctcttgtggccatcttggtgactcataaccggcgg
caacagcagcagggttaccgcggcaaccagaagagcggggcgtttgacatcaagtcccgc
ctcttcggctccaaggccagtaaaaatggcggtggccccggcaatggccccggcaacaac
aacgggcccatctacacctaccgtgagggcgtgtctgggggcgggctaactgagaaatcg
gccaatcacgggctgctgtcgaccacgcccacggcacaggacatcctgctgagcggcgag
atggacgaggcggagaggaagaagttcgacgagctggcggacgaggaggacgaggaacgc
tatgaccgcttcaccgccgccgggcccatcctccagctccgtcaccacgacgaccagcac
tacctggacgatgacatggagtcgcagagagacggatcggtcatctcacggaccgccgtc
tacgtgtag
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