Alosa sapidissima (American shad): 121723220
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Entry
121723220 CDS
T11137
Symbol
cep290
Name
(RefSeq) centrosomal protein of 290 kDa isoform X1
KO
K16533
centrosomal protein CEP290
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asad03036
]
121723220 (cep290)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asad03037
]
121723220 (cep290)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
121723220 (cep290)
Cilium and associated proteins [BR:
asad03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
121723220 (cep290)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEP209_CC5
Motif
Other DBs
NCBI-GeneID:
121723220
NCBI-ProteinID:
XP_041964613
LinkDB
All DBs
Position
11:1437534..1641483
Genome browser
AA seq
2228 aa
AA seq
DB search
MLDWNEIENVDPDELGNVEALVDTLLQVEKRDLQEKETASLAQLFSIVQTLLKIKCQELL
CAYEMIDKAGVDLARTENAFQTEVSKLQSELEMVNRSAGGRDTRFLRDEIRQLESHLQRK
EKELVQLEKEMMKEKKANEKLSAREDDIEDKNRKLKRENDQLRQDVEFYRRELDQRVPVQ
SKEEGIEAQRRFNITSRQLYQCMEELQRAEEEIGRLKTDSQLMKRNLEVSVREMEKMTDE
YNKMKIIVQQSDASMDQLRKDRDHAKAQVRELMDQIQRRAEEDDPVMAAVSAKVEEWKRL
LSEKDDEVLEYQQMNRDLREKLKASHMDSDKNNILALQQLIYELCAAVQERDNQIKMLSD
QVEQYTNEMEKNTKLIEEMKKPLRKEKGPLTTVHLRKIEELQAKLLVAERRAFEAEELAE
LAEKDARLKDKELSDTLTRIRVYESGTDGLEAAIAEIKQFKDQIRIRDDETEAMTKEINK
LEMRMNDLLDQNEALRERLGLNPEGEVDLTEFRRSKALKQRQYKAENQVLMREIERLEEE
RLDLKKQLRVMVKGKGMTVSSELMANIYTQREPAIASTEDDKVKKMNEHLRMELKSKQIE
LELAEKESSEFKAKLNELLNENKHLEEGIKEILAALQDSQKRTHTELGISVPSLERLVTA
LEMRNSEGTPETNLQIKMQIDYLADRNHELRQEMKGVREDSALTLRELTTANEKIMHLES
ELETLMKSNVNKEGFKGLFIPEELTPSSVDTISSLNDYAVRLLLEAKDKEDICKRLQVAL
KEYRRKLAVIRHQQCLLYEEYQRERAAWQKERELLKEANNKLEEQKKVDEMKVKEFTHWL
DVLEKHPTEIKRLISEAARKMTVLRVNEKSLSRYCTTLLELEQHLRKENNKLKDDFVKME
ISVTERISYLQRYKDMAVFKMTTLQKTLDKSVPSSELEKANKQYINLTVKYRDLLQKDNH
LIQRTTVLEHLEQENVSLREHISSLSKELQINKERVHILEQEWDHRNSQDTSSVEKAETN
SQIVSVSKMIATLEMKELNERQRAEHAQRMYEHLRNSLRQVEQRNFDLEKKFLEVSKQNL
DAQRVEQELRDELANSVSNAVNDSNQKYIADLEKIHTEMKMEISNLQEVANVAKMQVSAL
EARQQSREKEIEALRRQTLDYQAQSDEKALIAKLYQHIVALQLSETTALCKLETTTSQLC
KVEAQLLRAEQQLDEKEKTLWHVRQYAHGQAKHLRQTIQSLRRQFSGALPLAQQEKFFQI
MVHLKEDHNQVRHEALQAREQRRNFESKAKELDLKVKGLDDLMTTLKDTKGAQKVIEWHR
KLEEARLLELKSNREVSIQREEIKYLKTVIEEQERSISALEDDHIKDSKIHEEHQLLWEE
REVELERQLEHYEKQQNQVDNATQKISGVLPDPTLTVFQQLNHSLRKIKELIHTVAEKQA
TCNLLEQKLKEKEEALWKAEQNVLTRDKVINELRLCLPNIAEKEKILATLSRQDNLESQP
AFRVAQQTINSLQGRLNQKEEVLKKYQHLLARTRQEQEDITKKHKEDMQTLQQKLELLTE
ASLGHLKQTALDLMKKPFITIPTTKHLARLAELEQTVAEQENSLTTLMDKIKEKTAELDK
QRHIMDIQARKHVMDKDKLEESYKAQKKVVQQEAEELGTQVAQMEKQLHCLQTELDSQKE
ANLRSPSQTMKNLVESLKAQLCLKEKQQRVVNVTALSKALLELRAEMTSHAEHQTIISVT
QREEELNIQQIVDKHTKELQGRIQELNEELLNAKESVSVAQSKESSMRESHEGLVVELQK
SRRAQSKLQAEKTGLEDKVTNLKLRVKGLTSNLQYQNESEKKGSSVEGLQQSKLETSEPS
DVMVGRKDKDKMSKEEITRWEEAKKWQAKVEKIRKILKEKEREVETLSKQLNTTKDLYTR
LEEEKINLQKKLSRNRGVTTNQVMEARSLASEKENEELRRRNAELEQQIQTIKQQQALPR
DVAIEDLHLRNRYLEDKILCLESELSREPSSLVQRAGSPSQKKHKLQAENLRLSAKNLEL
CLQLEQATKDVPRLKDQVSDLKDMCNVLIKEKATLETKFEHIGQAGGSGKTVPELEKTIG
LMKKVVERVQRENEALKKVSATGMQEQLRTIEQEHEKLKSEYDKLKGKMQMESRKMGLEK
IVMENDQLRRDIKKEAEAAEKLKLEKACLEVTSQKLQLDLDEANQRLSLAESTSVGALQS
KIVTRNIK
NT seq
6687 nt
NT seq
+upstream
nt +downstream
nt
atgttagattggaatgagattgaaaatgttgatccagatgaactgggaaacgtcgaggca
cttgtcgacacattacttcaggttgagaagagggatttacaagaaaaagaaacggcatct
ttagcccaacttttcagcatagtgcagactctcctgaagataaaatgtcaagaactttta
tgtgcatatgagatgatagacaaggctggagttgatttggcaagaactgagaatgcattt
caaaccgaagtatccaaactacagagtgaactggagatggttaatcgctctgctgggggt
agagatacacgtttccttcgagatgaaattcgtcagctggagagtcacttgcagcgcaag
gagaaggaactggttcagctggagaaagaaatgatgaaagaaaagaaggcaaatgagaag
ctatcagccagagaggatgacattgaagataaaaataggaaactgaagagagagaatgat
cagcttcgtcaagatgtggaattttatcgtagagaactggaccagagggtgcctgttcag
tccaaagaagagggaattgaggctcagagacgcttcaacataaccagccggcaactttac
caatgtatggaggaattacagagggcagaagaagaaattggtcgtttgaagactgacagt
caactgatgaagaggaatcttgaggtgtctgtacgggagatggagaagatgactgatgag
tacaacaagatgaaaataatagttcagcagtcagatgccagcatggaccagctgcggaag
gatagagaccatgccaaagctcaggtgagagagctaatggaccaaattcagaggagggct
gaggaagacgacccagtcatggctgcagtcagtgctaaagtggaggagtggaagagattg
ttatctgagaaggatgacgaggtcctggaataccaacagatgaatcgtgacctgagagag
aagcttaaagcatcacacatggattctgataagaacaacatattagctctccagcagctt
atttatgagctgtgtgctgcggttcaagaaagagacaatcaaatcaagatgcttagtgat
caagtggaacaatacacaaatgaaatggaaaaaaacacaaagttaattgaagaaatgaag
aagcccttgaggaaagagaaaggtcctctaacaactgtgcacctgcggaagatagaggaa
ctacaggcaaagctccttgtggctgagagaagggcattcgaggctgaggaactagcagaa
ttagctgagaaagatgccagactcaaggacaaggagctcagtgacactcttactcgcata
agagtctatgagtctggcacagatggcttagaagctgctattgctgaaatcaaacaattt
aaagaccagatacgaataagagatgatgagacggaagcaatgaccaaggaaatcaacaaa
ttagagatgagaatgaatgatctattggaccagaatgaggccttgagagagagacttggt
ctaaacccggagggagaggtggatttgactgaattccgaaggtctaaggctttaaaacaa
aggcagtataaagcagaaaatcaagtattgatgagagagatagagagactcgaggaggag
agacttgatctcaaaaaacagttaagagtcatggtgaaaggaaaaggtatgacggtgagc
agtgaacttatggctaacatctacacacaaagagagcctgctattgcatccacagaagat
gacaaagttaaaaaaatgaatgaacatcttcggatggagcttaaaagcaaacagatagaa
ctggagctagcagaaaaggaatcatctgaatttaaggccaaacttaatgaactcttaaat
gaaaataagcacctggaagaaggcattaaagagatacttgcagctttacaggacagccag
aaaaggacacacacagaattgggaattagtgttcccagtttggaaagacttgtgactgct
ttagaaatgagaaattcagaaggaacgcctgaaaccaatctgcaaattaagatgcagatt
gactatttagcagaccgaaaccatgaactcagacaggaaatgaaaggtgtaagggaggat
tcagcgctgactttgagagaactgacaacggccaatgaaaagattatgcatttggagagt
gagttagaaacactgatgaaatctaatgtgaacaaagagggttttaagggcttgttcatt
cccgaggaattgacaccatctagtgtggacaccatcagctctctaaatgattacgctgtt
cgacttctgctggaggctaaagataaagaagatatatgcaaacgactccaggtggcttta
aaggagtatagaaggaaactagctgtgattcggcaccagcaatgtcttctatatgaagaa
taccaaagagagagagcggcatggcagaaggagagagagttacttaaggaggcaaataat
aagttggaggaacagaaaaaggtggatgagatgaaggtcaaagagtttactcattggctt
gatgtcttagaaaagcaccctacagaaatcaagagattgatctcggaggcagcgcgaaag
atgactgtgcttcgagtgaatgaaaagtctctaagtaggtattgcaccactttgctggaa
ttggaacagcaccttaggaaggagaacaacaagcttaaagatgattttgttaaaatggaa
atttctgtaactgagaggatatcttacttacaaagatataaggacatggctgttttcaaa
atgactacattacagaagactttggataaaagtgtcccttcctcagaacttgagaaagcc
aataaacagtacatcaacctcactgttaaatatagagacctgctgcaaaaagacaaccat
ctaattcagaggaccactgtgctggaacatttagagcaagagaatgtgtctcttcgtgaa
cacatcagctccctcagcaaagaactgcaaatcaacaaggagagagttcatatcctagaa
caagaatgggatcacagaaactctcaagataccagcagcgttgaaaaggctgagacaaac
agccaaatagtgtctgtttctaaaatgattgctactttggagatgaaggagctgaatgag
aggcagagggctgagcacgcccagagaatgtatgagcaccttcgtaattctttaagacaa
gtggaacaacgtaattttgaccttgagaagaaattcctggaggtgtcgaagcaaaacttg
gatgcccagagagtagagcaggagctgcgtgatgagctggctaacagtgttagtaatgct
gtgaatgatagcaaccagaagtatattgctgatcttgagaagatacacactgaaatgaag
atggagatatccaacttgcaggaggtggccaatgtggcaaaaatgcaggtttctgcactg
gaggccagacagcaatctagagaaaaggaaattgaggctctaaggagacagaccttagat
tatcaggcccagtcggatgaaaaggccctcattgccaagctctatcagcacattgttgcc
ttgcagttaagtgaaacaactgctctgtgtaagctggagaccaccactagccagctctgt
aaagtagaggctcagttgttgcgtgctgaacagcagttggatgaaaaggaaaaaacactg
tggcacgttcgacagtatgctcacggtcaagccaaacaccttagacagacaatacagtca
ttgcggaggcaattttctggtgccctgcccctggctcagcaggagaaatttttccagatc
atggtgcacctcaaggaggatcacaatcaggtgcgacatgaggctcttcaggcgagagag
cagagaaggaacttcgaaagcaaggcaaaagaactggacctcaaagtcaaaggactagat
gacctcatgaccactcttaaggataccaaaggggctcagaaggttattgagtggcacaga
aaattggaagaggcccgactgctggagttgaaaagtaatagagaagttagtattcagagg
gaggaaatcaaatacttgaaaactgtgatagaggaacaagaacggtccatcagtgctttg
gaggatgatcacattaaggacagcaagattcatgaggagcatcagttgctttgggaagaa
agggaggtggaattggagcgccagctggagcactatgagaaacaacagaatcaagttgac
aatgctactcaaaagataagtggtgttctcccggatccaactctgactgtctttcagcag
ctgaatcattccctgaggaaaattaaagagctcattcacactgttgcagagaagcaagcg
acttgcaatttgctggaacagaaactgaaagagaaggaagaagcattatggaaagcagag
caaaatgttctcactcgagacaaggtcattaatgagttgcgcctttgcttgccaaacatt
gctgagaaggagaagatcttagcaaccctcagcagacaggacaatcttgagagccaacct
gctttcagagtggctcaacaaactataaatagccttcagggacgcctgaaccagaaagaa
gaagtcttgaagaagtaccaacatcttctggctagaacaagacaagaacaagaagacatt
acaaaaaaacacaaagaagatatgcaaactcttcaacagaagcttgaactacttacagaa
gcttcattaggtcacctgaaacagacagctctggacttaatgaagaaaccctttattacc
ataccaaccacaaaacacctagctcgtttagctgaattggagcaaactgtggctgagcaa
gaaaactccctcaccaccctgatggataagatcaaagagaagaccgcagagttggacaaa
cagagacatatcatggacatccaggccagaaaacatgtcatggataaagacaagctggaa
gagagctacaaagctcagaaaaaagttgtacaacaggaagctgaggaactcggaacacag
gttgctcagatggagaaacaactgcattgccttcagacagagttggattctcagaaagag
gctaatcttcgctcaccaagccaaaccatgaagaatcttgtggagagccttaaagctcag
ctttgccttaaggaaaagcaacagagggttgtcaatgttacagcattgagcaaggcacta
ctagaactgcgtgctgagatgacctcccatgcagagcatcaaacaattatcagtgtcaca
cagagagaagaggagttaaatattcagcagattgttgacaaacacaccaaggagttgcag
ggccgtatacaggagttaaatgaggaactcttaaatgcaaaagaaagtgtaagtgtggcc
cagagcaaggagagttccatgagggagtcccatgagggcctggttgtagaacttcagaag
agtcgcagagctcagagtaaactgcaggctgagaagactggcttggaagacaaagttact
aatctgaaactgagagtaaaagggctcaccagcaatttgcagtatcagaatgaaagcgaa
aagaaagggtcttcagtagaagggttacagcaaagcaaattagagacatcagagccttca
gatgttatggttggaagaaaggataaagacaagatgtcaaaagaagagattacaaggtgg
gaggaagctaaaaagtggcaagccaaagtggaaaaaatacgaaaaatactgaaagagaag
gaaagagaggtggaaactttgtcaaaacagttgaatacaaccaaagatctctacaccagg
ttggaggaggagaaaattaatctacaaaagaaactatcacggaatcgtggagtgactaca
aatcaggtcatggaagcacggagtctggcatctgaaaaggagaatgaggaattaaggagg
agaaatgctgagctggagcaacagatacaaactataaaacaacaacaggctttgccaaga
gatgttgcaatagaggacctgcaccttaggaaccgatatctcgaagacaagatactgtgt
ctggagagtgaactttctagggaaccatcttcactggtacagcgtgctgggtctccatca
cagaaaaagcacaaactacaggcagaaaacctccggctctctgcaaaaaacctggagctc
tgtctccaactagagcaagcaaccaaagacgtccccagattaaaggatcaagtgtctgat
ctcaaagacatgtgcaatgttctcataaaagagaaggctacattggaaactaaatttgag
cacattggccaggcaggtggtagtggtaaaacagttcctgagctggagaagaccattggc
ctgatgaagaaggtagtggagagagtccagagagaaaatgaggctttgaagaaggtctca
gctacaggcatgcaggagcagctacgtacaattgagcaagagcatgaaaaactaaagtcg
gagtatgataaactcaaaggaaaaatgcaaatggagtcaagaaaaatggggctggagaaa
attgtgatggaaaatgaccagttaaggagagacattaaaaaggaggcagaggcagcagag
aaactgaaactggaaaaggcctgtttagaagtgaccagtcagaagcttcagttagatctg
gatgaagctaatcaaaggctttctctagcagagtctacttcagtaggcgctttacaatct
aagattgtaacgagaaacattaagtaa
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integrated database retrieval system
