Alosa sapidissima (American shad): 121723410 Help Entry 121723410         CDS       T11137                                  Name (RefSeq) filamin-C-like isoform X1   KO K27393   filamin-C Organism asad  Alosa sapidissima (American shad) Pathway asad04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:asad00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     121723410  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:asad04812]     121723410 Cytoskeleton proteins [BR:asad04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      121723410   Intermediate filaments    Intermediate filament-binding proteins     121723410 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Filamin Ig_GEX2_N CH Big_3_5 Y_Y_Y DUF5060 GBD_IRG7_N Motif Other DBs NCBI-GeneID:  121723410 NCBI-ProteinID:  XP_041964969 LinkDB All DBs Position 11:complement(11633419..11657122) Genome browser AA seq 2750 aa AA seqDB search MMSNNTHYDDQLPPQYYQGTDFGEEEDDEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLK CVNKSINDLQRELGDGLKLISLLEVLSQKKMYRKHHTRPNFRQMKLENVSVALEFLEREH IKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDEDDEDAKKLTPKQRLLGWIQN KVPQLPITNFNKDWRDGKALGALVDNCAPGLCPDWETWDPNKPVDNAREAMQQADDWLGV PQVIAPEEIVDPDVDDQSVMTYLSQFPKAKLKPGAPIKARQLFPKNAKAYGPGIEPHGNM VLKPAEFTVETVEAGQGEIIVYVEDPEGHTEEAKVVANNDPKRTYSVCYVPRVAGPHKVK VLFAGQDIDKSPFLVNVGKAMGDPNKVQARGPGLEPVGNVAAKPTYFDIYTAGAGEGDVG VVIVDPQGRRDTVEVMLENKGDNVYRCTYKPMMEGPHTIHVTFAGQPIPKSPFPVQIAEA PASASPARPPVQILPQAVRTPPVDKPKKGAPKVPPKPGRPTSNANACRATGRGLQPKGVR VKEVADFKVFTKGAGTGELQVNVKGPNGAEIPVKVRDAGDGVYECDYQPLLPGKYTVMVT WGGQPIPRSPFEVEVGVEAGQQKVRAWGPGLVTGMVGKSADFVVEAIGTEVGTLGFSIEG PSQAKIDCDDKGDGSCDVRYWPTEPGDYAVHVICDDEDIKDSPFIAHILPAANDVFPEKV KAFGPGLEPTGVIINKPAEFTIDARQAGNGKLKIYAQDAEGCVIDIQITEKGDGTFFCVY IPTKPIKHTIIITWGEVNVPNSPFRVLVGEGCHPEKVKVYGPGVEKTGLKANEPTYFTVD CSEAGQGDVSIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYTPPAAGRYTIMVLFADQ EIPTSPYKVKVDPSHDAGKVRAEGPGLNKTGVEVGTPTHFTIYTKGAGKAKPEVNFTAAV KGEAVKDFEIIDNHDYSYTVKYTALYQGNLSISVTHGGDPIPKSPFNITVAPPLDTSKVK VQGLNERVEVAKDQEFTVNSKGAGGQGEVGVKMTSPSGRPIPCKLESDKANESTNVKYIP PEEGPYKVDVTYDGNPIPGSPFAVEALMPADPSKVRAYGPGLQGGIVGQPAPFGIDTKGA GAGGLGLTVEGPCEAKIECQDNGDGTCSVSYLPTEAGDYNINILFGEAHIPGSPFKAKVR PALDASKVVAKGPGLERAKAGEVATFTVDCTHAGEAELTVEIVSETGAKVEVRIQNNNDG TFSVTYTPGFHGLHTITIKYGGQTVPKCPIRVQVEPAVDTSGVRVYGPGVEPRGVLRDVT THFIVDARAQTKSGGSHVKARIINPSGNNTDAYLTDKGDGTYRVEYTAYEEGIHLIEVLY DDVPIPNSPLRVGVVEGCDPTRVRAYGPGLENGVTNKSNCFTVETRGAGTGGLGLAIEGP SESKMSCKDNKDGSCSVEYVPFTPGDYDVNITYGGQPIPGSPFHVPVRDIVDPSKVKCSG PGLAPGVRAHHPQTFTVDSRQAGQAPLDVKLYGPSGATEPVQVMNNDDGTHTVNYTPAQE GPYAVSVKYADQEVPRSPFKVSAGPAHDASKVRASGPGLDTSGVAASLPVEFTIDARDAG EGLLTVQILDPEGKPKKASIHDNMDGTYTVSYLPDMTGHYTITIKYGGDEIPYSPYRIQS LPTGDASQCLLTVSIGGHRVANLGPKIQMAQDTVITVDAKSAGKGKVTCTVQTPNGMEMD MDVVENPDGTFDIYYTAPEPGKYVITIRFGGRHIPNSPFHVTATKEPVVPREDLEGMFRP LNLVIPFTVQQGKITGEVRMPSGKKACPQITDNKDGTVTVKYAPTEKGLHEMDIKYEGNH IPGSPLQFYVDAMNTGQVTAYGPGLCHGTVNKPATFTVVTKNAGEGGLSLAVEGPSKAEI TCKDNKDGTCTVSYLPTAPGDYSIIVKFDNKHIAGSPFTAKITGDESLRTSQLNVGTAAD VSLKITETDLSSLTASIRAPSGKEEPCLLKRLPNRHIGISFTPKEVGEHVVSVMKSGKHV TNSPFKIMVGQSEIGDASRVKAFGKGLVEGHTFELAEFFVDTRNAGYGGLGLSIEGPSKV DINCEDAEDGTCKVTYCPTEPGNYIINIKFADKHIPGSPFTVKVTGEGRMKESIMRKRHA PSIAPVGSTCDLNLKIPGNWFQMVSAQERLTRTFTRSSHTYTRTERTEISKVRGGETKRE VRVEESTQVGGDPFRDIFGDFLGRERMGSFGSLTTRAEGEAGVQPLTAQVTSPGGKIADA EIVDGGDSTYSVRFVPQETGPHTVNVKYRGQHVPGSPFQFTVGPLGEGGAHKVRAGGTGL ARGVAGVASEFSVWTREAGAGGLSIAVEGPSKAEISFEDRKDGSCGVSYMVQEPGDYEVS IKFNNEHIPDSPFVVPIASLSDDARRLTVTSLQEKDLKVNQEASFAVQRNGARGVVEAKV HTPSGRAEECFVTELDSDKNAISFIPRENGVHSIDVKFNGSHIPGSPFNVRVGEPDQAAD PGRVSAYGPGLQGGTTGVPAEFVVNICNAGSGALSVTIDGPSKAKMDCMECAEGYKISYT PMAPGNYLISIKYGGPQHIVGSPFKAKVTGARLSGGHSMHETSTVLVETVTKTSKMAGAY SSMSSASSATAAAAKPASDASKVVCRGPGLSKALVGQKNNFSVDCSKAGTNMLMVGVHGP RTPCEEVYVKHVGNRLYNVTYTVREKGNYMVIVKWGDDTVPGSPFQVAVP NT seq 8253 nt NT seq  +upstreamnt  +downstreamnt atgatgagcaacaacacacactacgacgaccagctgccgcctcagtactaccagggcacc gatttcggggaagaagaggacgacgagatgccggccacagagaaagacctcgcggaagat gcgccatggaagaagattcagcagaacaccttcaccaggtggtgcaacgaacacctgaag tgcgtcaacaagagcatcaacgacctccagagagagttgggcgacgggctcaagttgata tctctcctggaagttttgagccagaagaaaatgtacagaaagcatcacactagaccaaac ttcagacaaatgaaattggaaaatgtttcggtggcgttggaatttcttgaaagggaacac atcaagttggtatcgattgacagcaaggccattgtggatgggaacctgaagctgattctg ggtctgatctggaccctcatcctccactactccatctccatgcccatgtgggaagacgag gatgacgaggatgccaagaagctgacccccaagcagaggctcctgggatggatccagaac aaagtgccccagcttcccatcaccaacttcaacaaggactggcgggatggcaaggccctg ggagccctggtggacaactgtgcccccggtctctgtcctgactgggagacctgggaccca aacaagcctgtggataatgcaagagaagccatgcagcaggcagatgactggctgggtgtt ccacaggttattgctcctgaggaaattgtggaccccgacgtagatgaccagtcagtcatg acctacctgtcccagttcccaaaggccaagctcaagcctggtgcccccatcaaggccaga cagctgttccccaaaaatgccaaagcttatggaccaggtattgaaccccatggtaacatg gtgctcaagcctgcagaattcacagtggaaacagttgaggccggacagggtgaaatcatt gtatatgttgaggatccggagggccacactgaggaggctaaagttgttgccaacaatgac ccaaaaaggacatactctgtgtgctatgtgcctagagttgctggtcctcacaaggttaag gtgcttttcgctggtcaggacattgataagagccccttcctagtgaatgtaggaaaagcc atgggcgaccccaacaaagttcaggcccgaggtccagggctggagccggttggcaatgtg gctgccaaaccaacttactttgacatttacacagcaggtgcgggggagggagatgttgga gtggtcattgtcgaccctcaaggccgtagggacacagtggaggtgatgctggagaacaaa ggtgataatgtgtaccgctgcacctacaagcccatgatggagggcccccacaccatccac gtcacatttgctgggcaacccatccccaagagccccttcccagtgcagatcgctgaagct cccgcgagtgcctctcccgcgaggcccccggtgcagattctcccgcaggcggtgcgcacc ccacccgtggataagcctaagaaaggtgcacccaaagtgccacccaaacctggccgacca accagcaacgctaatgcctgcagggctactggccgtggccttcagcccaaaggggtgaga gtgaaggaggtggctgacttcaaggtcttcaccaagggagctggaactggagagctccag gtcaacgtgaagggtccaaatggagcagagattcctgtgaaggtgcgcgatgctggggat ggtgtgtatgaatgtgactaccagcctttactgcctggaaaatacacagtcatggtcacc tggggaggacagcccatcccacgcagccctttcgaggttgaggtcggagttgaggcaggc cagcagaaagtccgtgcctggggtcctggccttgtgaccggcatggtgggcaagtcagct gactttgtggtggaggccatcggcaccgaagttggaacactgggcttctccattgagggt ccatctcaggccaagattgactgtgatgacaagggcgacggctcctgcgatgtgcgttac tggcccaccgagcccggcgactacgccgtccatgtcatctgtgacgacgaggacatcaag gacagccctttcatcgctcacatcctcccagcagccaacgacgtcttccccgagaaggta aaagcctttggaccaggacttgaacctactggcgtcatcatcaacaagcctgctgaattc accattgatgccaggcaagctggaaacggcaaactcaagatctacgctcaggatgcagag ggctgtgtcattgacattcaaatcactgaaaagggtgatggcaccttcttctgtgtgtac atcccaaccaagccaatcaaacacaccatcatcatcacctggggtgaggtcaatgttccc aacagccccttcagggttttggttggtgaaggatgccatccagaaaaagttaaggtctat ggaccaggtgtggagaagactggcttgaaagccaatgagcccacctacttcactgttgac tgcagcgaggcaggccaaggtgatgtcagtattggaatcaaatgtgcccctggagtggtt ggacctgctgaggcagacatcgactttgacattatcaagaacgacaacgacacattcact gtcaaatacacaccccctgctgctgggcgttataccattatggtcctgttcgctgatcag gaaatacccactagcccatacaaggtgaaggtggacccatctcatgatgcaggcaaagtg agagcagaggggcctggactcaacaagacaggcgtggaggtgggcacaccaactcatttc accatctacaccaagggcgcaggaaaggccaagcccgaggtcaacttcactgcagccgtc aaaggagaggctgtgaaggacttcgagatcatcgacaaccacgactactcgtacaccgtc aagtacactgccctttatcaggggaacctgagcatctccgtcacccacggaggagacccc attcccaagagccctttcaacatcaccgtggcccctcctctggataccagcaaggttaag gtgcaaggactcaacgagagagttgaggttgcaaaggatcaggagttcactgtgaacagc aaaggagccggcggtcagggggaggtcggcgtgaaaatgacctcaccctctggccgtcca atcccatgcaagcttgaatcagacaaggctaatgaatctaccaatgtgaagtacatccca cccgaggagggcccctacaaggtggacgtcacctacgatgggaacccaattccagggagc ccttttgctgtggaggcacttatgccagcagacccctcaaaggtacgtgcttatggtcca ggattgcagggtggcattgtgggtcaaccagcaccttttggcatcgacaccaagggtgcc ggtgccggcggtctgggcctgactgtggaggggccctgcgaggctaaaattgagtgccag gacaacggcgatggcacctgctccgtttcctatctgcccactgaggctggagactacaac atcaatatcctctttggtgaagctcatatccctggctcgcctttcaaggccaaggtgcgc cctgctctggacgccagcaaggtagtggccaaggggccgggcctggagcgggcgaaggcc ggcgaggtcgccaccttcaccgtggactgcacacacgcgggcgaggctgagctcactgtg gagatcgtctcggagacgggcgccaaggttgaggtgcgcatccagaacaacaacgacggc accttctcggtcacctacaccccgggcttccacggcctgcacaccatcaccatcaagtac gggggccagacggtgcccaagtgccccatccgtgtccaggtggagccagcagtggacacc tctggcgtccgggtctacggccccggagtggagcccagaggtgttctgcgtgacgtgacc acccacttcattgtggacgcccgcgcacagaccaagagcgggggcagccacgtcaaggcc cgcatcatcaacccctcgggcaacaacacggacgcctacctcaccgacaaaggcgacggc acctaccgagtggagtacacggcgtatgaagaaggtatccatctgattgaagtgctgtac gatgacgttcccattccaaacagccccttaagggtgggtgtggtggagggctgtgaccca acacgtgtgcgtgcttatggacctggccttgagaatggtgtcacaaacaaatcaaactgc ttcacagtggagaccagaggtgctggcactggtggtctgggcttggccatcgagggacca tcagagtctaagatgtcctgcaaagataacaaggacggcagctgcagcgtggagtatgtg cccttcactcccggtgactacgacgtcaacatcacctacggaggccagcccatcccaggc agtccattccatgtgccggtgagggacatagttgaccccagcaaggtgaagtgctccgga cccggactggcccctggtgtgagggctcaccatccacagaccttcacggtggacagccga caggcaggacaggccccactggacgtcaagctctacggcccatcaggggctactgagcct gttcaggtcatgaacaatgatgatggaacgcacacggtcaactacacacccgcccaggaa ggtccttacgccgtgtctgtgaaatacgctgaccaggaagtcccccgcagcccattcaag gtcagtgcaggcccagcacacgatgccagcaaagtccgtgccagcggtcctggtctggac acctctggggtggccgccagcctgccggtggaattcaccatcgacgcccgcgatgccggc gagggcctgctcaccgtccagatcctggatcccgagggcaagcctaagaaggccagcatc cacgacaacatggacggcacttatactgtgtcctatctgcccgacatgaccggtcactac actatcaccatcaagtatggtggcgatgagatcccttactccccctaccgcatccagtct ctgcccactggagacgccagccaatgcctcctcacagtgtccattggaggacacagagtc gcgaacctcgggcccaaaatccagatggcccaggacactgtcatcacagtggacgccaag tccgctgggaagggcaaggtgacctgcactgtgcagacacccaacggcatggagatggac atggatgtggtggagaaccccgacggcaccttcgacatctactacacagcgcccgagccg ggcaagtacgtcatcaccatccgcttcggaggacggcacattcccaacagcccattccac gtcacggccaccaaggagccagtcgtccctagagaagacttagagggcatgttccgcccc ctcaatcttgtcatccccttcaccgtgcagcagggaaagattacaggcgaggtgcgtatg ccttctggtaagaaagcatgccctcagatcacggacaacaaggatggcacagtgactgtg aagtacgctcccactgagaagggcctgcacgagatggacatcaaatacgaaggcaaccac atcccaggaagtcctctgcagttctatgtggatgccatgaacactggtcaggtgacagct tatggtcctggtctgtgccacggcactgtcaacaagccagccaccttcaccgtggtcacc aagaacgctggggaaggtggtctttctctggctgtggaaggaccttcaaaggctgagatc acctgcaaggacaacaaagatggaacctgtactgtgtcttacctgcccactgcacctggc gactacagcatcattgtgaagttcgacaacaagcacattgctggcagccccttcactgcc aagatcacaggtgatgagtcgctcaggacatcccagctgaacgtcggcacagcagcagac gtctcgctgaagatcacagagacagacctgagctccctgacggccagcatcagagcaccg tccggcaaagaggagccctgtctgctgaagagacttcccaacaggcacattggaatctcc ttcacccctaaggaggtgggtgagcatgtggttagcgtgatgaagagtggaaagcatgtg acaaacagccccttcaagatcatggtgggtcaatcagagatcggagacgccagccgggtc aaggccttcggcaagggcctggtggaaggccacaccttcgagttggctgagttctttgtg gacaccaggaatgcaggctatggtggactggggctgtctattgagggtccgagcaaagtg gatattaactgtgaagatgcagaggatgggacatgcaaggtgacatactgcccaacagag cctggcaactacatcatcaacatcaagtttgccgacaagcacatcccaggaagtcctttc acagtgaaggtgacaggagaaggcaggatgaaagagagcatcatgaggaagagacatgct ccctctatcgcgcccgtgggcagcacatgcgaccttaacctcaaaatcccaggaaactgg ttccagatggtgtccgctcaggagcgtctgacccgcacgtttacacgcagcagccacacc tacacccgcaccgagcgtaccgagatcagcaaggtgcgcggcggcgagaccaagcgggag gtgcgcgtggaggagagcacgcaggtcggcggcgaccccttccgggacatcttcggcgac ttcctgggaagggagaggatgggcagtttcggaagcctgaccactagagcagaaggagaa gctggggtgcagccactgaccgctcaggtgaccagccctgggggtaagatcgcagacgca gagatcgtggacggaggggacagcacctacagtgtgcgtttcgtgccccaggagactggc ccccacaccgtcaacgtgaagtacaggggccagcacgtccctggcagccccttccagttc accgtggggcccctgggagaaggaggtgcccacaaggtgcgggctggaggcactggactg gccagaggagtggccggagttgcatctgaatttagcgtgtggacacgagaagctggcgct ggaggactttccatcgcagtggaagggcccagcaaagctgagatctcctttgaagaccgg aaggacggctcctgtggagtttcttacatggtgcaggaaccaggtgactatgaggtgtca atcaagttcaacaacgagcatatccctgacagcccctttgtcgtgccgattgcctctcta tctgacgacgcacgccgactcactgtcacgagcttgcaggagaaggacctgaaggtgaac caggaggcctcctttgctgtgcagagaaacggcgcacggggcgttgtcgaggccaaagtc cacacgccatccgggagagctgaggagtgtttcgtcacagagctagacagcgacaagaat gcaatcagcttcattccacgggagaacggcgtccactccatcgatgtcaaatttaacgga agccacattcctggaagtcccttcaatgtgcgtgtgggcgaacctgaccaagccgcagac ccaggcagagtgtccgcctacggacctggcctgcagggaggcaccacaggtgtgcctgcg gagtttgtggtgaatatctgcaatgctggatccggggccctgtcggtcactattgatggt ccctccaaagctaagatggactgcatggaatgtgcagagggctacaagatcagctacaca ccaatggcaccagggaactatctcatctccatcaagtatggaggaccacagcatatcgtg ggcagtcccttcaaagccaaagttacaggtgcgcgtctgtcgggaggccacagcatgcat gagacctccacggtgctggtggagacggtcaccaagacctctaagatggccggcgcctac agctccatgtccagtgccagcagtgccaccgcggccgccgccaaacccgcatcggacgcc agcaaggtagtgtgtcgagggcccggcctctccaaagctctcgtgggtcagaagaacaac ttcagcgtggattgcagcaaagcaggtaccaacatgctgatggttggcgtgcacggcccg agaactccgtgcgaagaggtgtatgtgaagcacgtgggcaaccgcctctacaatgtcacc tacacagtgagggagaagggcaactacatggtcatcgtcaagtggggagatgacacggtt ccagggagccccttccaagtggccgtcccctga

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