Alosa sapidissima (American shad): 121723646
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Entry
121723646 CDS
T11137
Symbol
fads2
Name
(RefSeq) acyl-CoA 6-desaturase
KO
K10226
acyl-CoA 6-desaturase (Delta-6 desaturase) [EC:
1.14.19.3
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad00592
alpha-Linolenic acid metabolism
asad01040
Biosynthesis of unsaturated fatty acids
asad01100
Metabolic pathways
asad01212
Fatty acid metabolism
asad03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
121723646 (fads2)
01040 Biosynthesis of unsaturated fatty acids
121723646 (fads2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
121723646 (fads2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
asad01004
]
121723646 (fads2)
Enzymes [BR:
asad01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.19 With oxidation of a pair of donors resulting in the reduction of O2 to two molecules of water
1.14.19.3 acyl-CoA 6-desaturase
121723646 (fads2)
Lipid biosynthesis proteins [BR:
asad01004
]
Desaturase
Front-end
121723646 (fads2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FA_desaturase
Cyt-b5
Motif
Other DBs
NCBI-GeneID:
121723646
NCBI-ProteinID:
XP_041965476
LinkDB
All DBs
Position
11:24572883..24600558
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AA seq
445 aa
AA seq
DB search
MGRGGQKTDPALENGGRGASIFTWEEVQKHSRRGDQWLVINRNVYNISDWVKRHPGGIRV
ISHYAGEDATDAFVAFHPDPKFAQKYLKALQIGELAATEPSQDRQKKERLVSDFRTLRED
LECRGLFRTDPVFFSVCLGHILLLEVLALLLVWAAGTGWLSSLTCAALLATSQSQAGWLQ
HDFGHLSVFKKSKWNHLLHKFIIGHLKGASANWWNHRHFQHHAKPNIFSKDPDVNMLHAF
VLGDTQPVEYGIKKLKYLPYNYQHQYFFLIGPPLLIPVYFHIQIMTTMFFRRDWVDMAWS
MTYYMRYFLCFVPFYGFLGSIALISFVRFLESHWFVWVTQMNHIPMDIDHETHQDWITMQ
LKATCNVEQSFFNDWFTGHLNFQIEHHLFPTMPRHNYWLAAPSVKALCEKHGIPYEVKTL
WRGLVDVVSSLKKSGDLWLDAYLHK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcggaggtcaaaagaccgatccggctttggagaacggaggacgcggcgcgagc
atcttcacctgggaggaggtgcagaagcattcccgccggggcgaccagtggctcgtgatc
aaccggaatgtgtacaacatcagcgactgggtgaagcgccacccgggcgggatacgggtc
atcagtcattatgcaggggaagatgcaacggacgcgttcgtggcatttcaccccgacccc
aagttcgcgcagaagtacctgaaggctctgcagatcggagagctagcggccaccgagccc
agccaagaccgccaaaagaaggagcggctggtgagtgatttccgcaccctgcgtgaggat
ctggagtgccggggcctgttccgcacggaccccgtgttcttcagtgtgtgcctgggccac
atcctgctgctggaggtgctggcacttctgctggtgtgggccgcgggcactggctggctc
tcctccctcacctgcgctgccctcctcgctacctcacagtcccaagcgggttggctgcag
catgattttggccacttgtctgtatttaagaagtctaaatggaaccatctgttgcacaag
ttcatcatcggccacctgaagggagcctcggcgaactggtggaaccacaggcatttccag
caccacgccaagcccaacatcttcagcaaagacccagacgtgaacatgctgcatgccttt
gtgctgggagatacccagccggtcgagtacggtataaagaagctgaagtacctgccttat
aactatcagcaccagtacttcttcctaatcggccctcctctcctcatccctgtgtatttc
cacattcagatcatgaccacaatgttcttcaggagggactgggtggacatggcttggtcc
atgacatactacatgcgttatttcctgtgctttgtgccgttctatggtttcttgggctcc
attgctctcatcagctttgtcaggttcctggagagccactggtttgtatgggtcactcag
atgaaccacattcccatggacatcgaccacgagacgcaccaggactggatcaccatgcag
ttgaaggcgacctgcaacgttgagcagtccttcttcaacgactggttcaccggccacctc
aacttccagatcgagcaccatctcttccccacgatgcctcggcacaactactggctggct
gccccatcggtgaaagccctgtgtgagaaacatgggatcccatatgaggtgaagactctg
tggcgcggcctagtggacgttgtgagctccctgaagaagtctggtgatctttggctggat
gcatacctgcacaagtga
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