Anolis sagrei ordinatus (Brown anole): 132774742
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Entry
132774742 CDS
T09595
Symbol
SMCHD1
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
asao
Anolis sagrei ordinatus (Brown anole)
Brite
KEGG Orthology (KO) [BR:
asao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asao03036
]
132774742 (SMCHD1)
03400 DNA repair and recombination proteins [BR:
asao03400
]
132774742 (SMCHD1)
Chromosome and associated proteins [BR:
asao03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
132774742 (SMCHD1)
DNA repair and recombination proteins [BR:
asao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
132774742 (SMCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCHD1_S5
Ig_SMCHD1_1st
Ig_SMCHD1_6th
Ig_SMCHD1_5th
Ig_SMCHD1_8th
Ig_SMCHD1_2nd
Ig_SMCHD1_4th
Ig_SMCHD1_7th
HATPase_c_3
SMC_hinge
HATPase_c
Nmad5
ATG16
Motif
Other DBs
NCBI-GeneID:
132774742
NCBI-ProteinID:
XP_060631107
LinkDB
All DBs
Position
Unknown
AA seq
2015 aa
AA seq
DB search
MAAEGKAVLTVFVYDRRRDTSDEGEKVLRCPEGDYGRLRDAACQVFGISSEETFIITTTN
RKEITVENFGEIVKDKMTCYLLHSIDQLLPSAAKERIDFIPHYDTLVKSGIYEYYASEGQ
NPLPFALAELIDNSLSATSQNTGVRSIQLKLLFDDTQGKPAVVVIDNGRGMTSKQLNNWA
VYRLSKFTRQGDMESDHSAYVRPPAVHRSLNSDISYFGVGGKQAVFFIGQSARMISKPAD
SQDVHELVLSKEDFEKKEKNKESVYSSYIRNRKLCDSSHIVTDDERFLHNLIIEEEDKKC
FTTVVITGVQPDHVHYLKNNFHLWIRQLAHIYHYYIHGSKGNETNLPKKEGRPFSNINIE
ISMFEKGKIPKIMNLREIKDDMQTLYINTAADSFEFKANVEGDGIVEGIIRYHPFLYEKE
TYPEDPCFPSRIKDDDEEEDDDDEADCFAVERRARGKRPIFECFWNGRLIPYTTVEEFEW
CAVPKKRGPTPIECYKRISGVLFTNDKFQVSTNKLTFMDLEIRLKDKNTIFTRIVNGQAQ
RMKIDREFALWLKECHEKYDKQIKFSHFKELITRPEVTSKRMQRPWATYSAIEWDGKTYK
VEQLVKSIKTAPIYHGSIQNFFLYGDHDGDVYAPGGFVQLALEPQALYDEIKVIPIHKLD
RSASDTALKKYIEEEMARLPDRLSVTWPEGDELLPDETKLAGATIGALKVEILNKKGEPM
QKLPGSRHGGSKKLLVELKVILHSPTGNKEIISHISQHGNKWPFWFKKMENINKLGAYTL
KLQVVLNESNADIYAGRSLPSKTFKFTIIEGKPQKFSIGLLDPPFRVGLPFNIPLDVQDE
FGHSTYLREDIVPNLEASGLTLHYEEVKRGPNCAIKGITASGLVNSLQGKNFSLKITLPG
LKEESQVLKIKLLPGPPCKLEVQPNSDILKTENGAAFPFHVKVLDKAGNLTAQPKLIVHC
KFSGAPDLPVYTVDCSSTGSNILTGNVLHVQNIKKEQIINAKIEIPSCKNVLPLEKTIEI
LPSSRVAKLQIFSVEGEIAIHIKDQDEIKQIAGHVMQNLIFRMYDEGEREIIITQNLAEK
IKVNWTPTINREQLLNGFLPDVKVPMSVKEPHYYQVTFHDEHVSLGSGFTVRPHADEPKH
IKCTIKGSDKLQMCETLQGQIEVMITDQHGNHVQNLTSSCVTSLGISGNDLDKSDLKTIW
QEDAQTICVTGIRFQICPPGIKELCFAWHKFSHFVRLNLVAGPPAKLLLIDWTDLEEPVS
VINGKELHKPFILQVCDHWNNPSSEPNVKINLLKASSVKITPSNLLLKTDENGRANFGTV
TIHAPRGEHVLQFKALYNRNTLNCPVIKLNVLPDPEKPICLNVKYDKDATFTAGSTFPDF
IVSIISEANNIIVNINPGRICMKMWEGQSSATLSQNITTFGCSQKKDVKDEGFFYFRDKI
VPEKAGTYSIQFLFAIDKANTLNSEQILIEVVPNEPTQLIPRNLPNTPAVTNVWAVGSRT
LVKDLTLIMMDEYKNCTGNDLDGKIIAKIKSSIENDTDIPMFQGKTNTVEFPLHRGIVEI
EALVLAENSPGRDSTKYILEFEPAIPTLKRRLKPYCLSFLFYDGYKKQQQMATLTKRRDE
LSQSINAYRSLFDTTNQLLGELKSQILETEKKEAQLKNNLKRCQIDIPQMNALQYVDSLT
MQKRSEQERIMKIPRRMCAISNYPRSSQDVLGKISHLAQIEDNEVAKVISWHLASDMDCV
VTLTTSAARRIFDETQGRQQVLPLDSIYKKSLPDWNRPLPHLRNGKNCFRPMGRPVFARN
LLTFPEHTENCQTVFGMLLGDTIIIDNLDAANHYRTEVVKISHCPTLLTREGDRIRSNGK
FGGLQNKAPPMDKLRGMVFGEPLPQRYNTLSEHIDLLQQYRTSILRLHKVKTELENQEKT
MNTPEMQRKKEQLADQEKKLKSIEQELGMTSSAQCTTSSLPPEENDATDSPSPPKRMRRE
ATKGLYSPEEWVSSSPVKKQHQTVTVKVTPQKNTE
NT seq
6048 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggagggcaaggcggtcctgacggtcttcgtctacgaccgccgccgagacact
tcggacgagggcgagaaagttcttcgctgtcctgagggagactatgggcgcctccgggac
gccgcctgtcaggtgtttggcatttcttctgaagaaacttttataatcacaactactaac
agaaaagagatcacagtcgaaaattttggtgaaattgttaaggacaagatgacttgttac
ttgcttcactccattgatcagttgcttccctcagcagcaaaggaacgtattgatttcata
ccacattacgatacacttgtaaaaagtggaatatatgaatattatgctagtgaaggacaa
aatcctctgccatttgctcttgcagaattaattgataactcattatcagcaacttctcaa
aatacgggcgtacggagtatacagttaaagctgttgtttgacgacactcaaggaaaacca
gctgtcgttgtgattgataatggaagaggcatgacttctaaacaacttaataattgggct
gtgtatcgattgtcaaagtttacacgacaaggcgatatggaaagtgatcattcagcctat
gtacgacctccagcagtacatcgcagtttaaacagtgatatatcatattttggggttggt
ggtaaacaagcagtgttttttattggacaatctgctagaatgataagcaaaccggcagat
tctcaggatgttcatgagcttgttctttctaaagaagattttgaaaagaaagagaaaaac
aaagaatctgtgtacagcagctacattagaaacagaaagctatgtgactcttcccacatt
gttactgatgatgaaagatttctgcacaatcttataatagaagaagaagataaaaaatgt
ttcactacagtagttattactggtgttcagccagatcatgtgcactacttaaaaaataat
tttcatctttggataaggcaattggcacacatatatcattactatatccatggttcaaag
ggaaatgaaacaaatttgccaaaaaaagaaggaagaccttttagtaatatcaacattgag
atttcaatgtttgaaaaagggaagatacccaagattatgaaccttagagaaatcaaagat
gacatgcagactttgtatataaacactgcagcagatagttttgagttcaaggctaacgtt
gaaggagatggtatagtagaaggcattatacgttatcatcctttcttgtacgaaaaagaa
acctaccctgaagacccttgctttccttcaagaataaaagatgatgatgaagaagaagat
gatgatgatgaagcagactgttttgccgtggaaaggagagctagagggaaaagacctatt
tttgaatgtttttggaatggaagactaatcccatatacaactgtggaagaatttgagtgg
tgtgctgttcccaagaaaagaggacctacacccattgaatgttacaagagaatttctggt
gtattatttacaaatgacaaatttcaagtcagcaccaataaactgactttcatggatttg
gagataaggttgaaagacaaaaatacaatttttacaagaattgtcaatggacaggcacag
agaatgaaaattgacagagaatttgcattatggctcaaagagtgccatgaaaagtatgac
aaacagataaaattttctcacttcaaagaactaattacacgccctgaagtgacttccaaa
agaatgcagcgtccctgggctacatattcagcgatcgagtgggatggaaaaacatataaa
gttgaacagctagtaaaatcaattaaaacagctccaatataccatggaagtatacaaaac
ttttttctgtatggagatcatgatggagatgtatatgctccaggaggatttgttcaatta
gctttggaaccacaagcactatatgatgaaataaaggttattccaatacacaaacttgat
cgttcagcatctgacacagcactgaaaaaatacattgaagaagaaatggccagacttcct
gataggttgtcagtcacatggcctgaaggagatgaattgttaccagatgaaacaaaactt
gctggggcaactataggtgcattaaaagttgaaattttgaataaaaaaggagagcccatg
caaaaacttccaggttcaagacacggaggatcgaagaaattgcttgtggaactgaaggtt
attttgcattctcctactggaaataaggaaattatttctcatattagtcaacatggaaat
aaatggcctttctggttcaaaaaaatggaaaatattaacaaacttggggcctacacactg
aaacttcaagtagtgttgaacgaaagcaatgcagatatttacgcaggacgatctcttcca
tctaaaacttttaaatttactatcatagagggtaagcctcagaagttttcaataggtctt
ctggatcctccatttagagttgggcttccattcaacattcctctagatgtccaggatgaa
tttggtcattcgacgtatctgagagaagatattgtccctaacctagaggccagtggttta
acattacactatgaagaagtaaaaagaggaccaaactgtgccattaaaggaataacagct
agcggccttgtaaacagtttgcagggcaagaacttttctttgaagatcactcttccaggt
ctgaaggaagaatcccaggttttgaaaattaaacttcttccaggtcccccttgtaaatta
gaagtccaaccaaattctgacatcttgaaaactgagaatggagcagcatttccttttcat
gttaaagtgctggataaagcaggaaacctaaccgcacagcccaaactaattgtccattgc
aagttttcaggagctccagatcttcctgtatatactgtggactgcagcagtactggttcg
aatatcttaactgggaatgttctgcatgtacaaaatataaagaaggagcagatcattaat
gcaaagattgaaataccaagttgtaaaaatgtgctgccactggagaagacaattgaaata
cttcccagcagtcgtgttgcaaaactacagatatttagtgtcgagggagaaatagcaatt
catattaaggaccaggatgaaattaaacagattgcaggtcatgtgatgcaaaatcttatt
ttccgaatgtatgatgaaggggaaagagagattataataactcaaaatttggctgaaaag
attaaggtaaactggactccaacaattaatcgagaacaattacttaatggtttcttacct
gatgtgaaagtgccaatgtctgtaaaagagccgcactattaccaggtgacattccatgat
gaacatgtatcactgggaagtggttttacggtcagaccacatgctgatgaaccaaagcat
ataaaatgcacaatcaaaggctcagataaattacaaatgtgtgaaacattacaaggtcaa
atagaggtaatgattacagatcagcatggaaatcacgttcaaaacctgacatcatcttgt
gttacttcattgggaatttctgggaatgatctggataagtcagatctgaaaacaatttgg
caggaagatgcccaaactatttgtgtcacgggtatcagatttcagatatgtccacctgga
atcaaagaactgtgctttgcttggcataaattttctcattttgtgagattaaatttggtg
gcaggacctccagctaaattgctgcttatagattggacagacttagaagagcctgtgtca
gtgattaatggcaaagaactacacaaaccttttatactgcaagtctgtgatcattggaat
aacccatcttctgaacctaatgtcaaaatcaaccttttaaaagcttccagtgtaaagatt
acaccttcaaacctgcttcttaaaacagacgaaaatggtagagcaaattttggaactgtt
actattcatgccccaagaggagagcatgtgttgcagtttaaagccttgtataatagaaac
acattgaactgccctgtaattaaattaaatgttctgcctgatcctgagaaacctatatgt
ttgaatgtcaagtatgacaaggatgctacctttacagctggaagtacctttcctgatttc
attgttagtattatttctgaagctaacaacattattgtaaatataaatccaggaagaatt
tgcatgaaaatgtgggaaggacaaagtagtgcaactttatcgcaaaatattacaacattt
ggctgctcccaaaaaaaagatgtcaaggacgaaggctttttctacttcagggacaaaatt
gttccagaaaaagcgggcacatacagcatccagtttttgtttgccatcgacaaagcaaat
actcttaacagtgaacagattctaattgaagtggtgcctaatgaaccaacacagctgatc
ccaagaaatttgccaaatactcctgctgttactaatgtttgggctgttggcagtcggact
cttgtcaaggacttgaccctcattatgatggatgagtacaaaaactgcaccggtaatgat
ttagatggaaaaatcatagctaaaattaaaagttcaattgagaatgatacagacattccc
atgttccaaggaaaaacaaatacagttgaatttcctcttcacagagggattgttgaaatt
gaggctcttgtacttgcagaaaatagtccagggagagacagtacgaaatatattctggaa
tttgagccagcaataccaactttgaaaagacgtttgaaaccttactgtctctcttttttg
ttttacgatggttacaaaaagcaacagcagatggcaacacttactaaaaggagggacgaa
ctatctcagtcaataaatgcatatagaagtttgtttgacaccactaatcagcttctcggt
gaactaaagagtcaaatcctggaaacggaaaaaaaggaggctcagctgaagaacaatctg
aaaagatgtcagattgacatacctcaaatgaatgctctgcaatatgttgattctttaaca
atgcagaaaaggtctgagcaggaaagaataatgaaaatacctagaagaatgtgcgcaatt
agcaattatcccagaagtagtcaagatgtgttgggcaagatttcacacttggcgcagatt
gaagataatgaagtggcaaaggtcatctcttggcatctggcgagtgatatggactgtgtc
gtcactctcactacttctgctgcccgccgtatctttgatgaaacccaaggccggcagcaa
gtattgccacttgattctatttataagaaaagtctgccagactggaacaggcctttacct
cacctacgaaatggaaaaaactgtttcaggcctatgggaagacctgtatttgccaggaac
ttgctaacatttccagaacacacagagaactgccagacagtgtttgggatgctcttagga
gataccatcattattgacaatctggatgctgcaaatcattatagaacagaggttgtgaaa
atttcacattgcccaactttactgacaagagagggagacagaattcgcagcaatggcaag
tttggaggccttcaaaataaagcccctcccatggataaacttcgagggatggtttttgga
gaaccactcccacaacgttacaatactctctctgagcatatagatctccttcagcaatac
cgtacatctattttgagacttcataaagtaaaaacagaacttgaaaatcaagaaaaaacc
atgaatactccagaaatgcaaagaaagaaagaacagcttgctgatcaagagaagaagctc
aagtcaatagagcaggaattaggtatgacttcatcagctcagtgcaccacatcatcgctt
cccccagaagaaaatgatgcaacggacagtccaagtccaccaaaaagaatgcggagagaa
gcaacaaaaggattgtatagtccagaagaatgggtttcatcatctcctgtgaagaaacag
caccaaaccgtaactgttaaagtaacacctcaaaaaaacacagaataa
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integrated database retrieval system
