KEGG   Actinoplanes sp. SE50/110: ACPL_3138
Entry
ACPL_3138         CDS       T02044                                 
Symbol
ligA
Name
(GenBank) DNA ligase (NAD+)
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
ase  Actinoplanes sp. SE50/110
Pathway
ase03030  DNA replication
ase03410  Base excision repair
ase03420  Nucleotide excision repair
ase03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ase00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ACPL_3138 (ligA)
   03410 Base excision repair
    ACPL_3138 (ligA)
   03420 Nucleotide excision repair
    ACPL_3138 (ligA)
   03430 Mismatch repair
    ACPL_3138 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ase03032]
    ACPL_3138 (ligA)
   03400 DNA repair and recombination proteins [BR:ase03400]
    ACPL_3138 (ligA)
Enzymes [BR:ase01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     ACPL_3138 (ligA)
DNA replication proteins [BR:ase03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     ACPL_3138 (ligA)
DNA repair and recombination proteins [BR:ase03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     ACPL_3138 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ACPL_3138 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     ACPL_3138 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      ACPL_3138 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_5 HHH_2 BRCT PTCB-BRCT DUF7575 DNA_ligase_ZBD
Other DBs
NCBI-ProteinID: AEV84033
UniProt: G8SD23
LinkDB
Position
complement(3428528..3430636)
AA seq 702 aa
MPTEPEIAPVVDAAHAEPFDTAADYRAAIERIRAAAAAYYAGTDLAMDDATYDALLARVT
ATEAARPGWTVAESPSDTVGAGGGVTGDVQHSTPMLSLANVFDPDELLAWAARLDRVLGR
PAAGYTVEPKIDGMAIAARYTDGRLVQVATRGDGRAGEDVTAQARTVAGLPAELTRPVTV
EVRGEVFMTDEDFTRANELRTGHGGAPFANPRNAAAGTLRAQDRAYVAPLSFLAYAVHDL
PGGEGLTHSAAMAAIAELGVATTGGSAAGMAVCATADELVAAISRLGALRDKLGFDIDGV
VVKADSPADRDAAGSSSRAPRWAIAYKFPADTRTSRLTAIEVQVGRTGLITPVAVIEPVQ
VGGVVVTSATLHNFGDLVRRDVRVGDTVFVRRAGEVIPEITGAKLDERPEGAEPFAAPEH
CPRCGGDIDRSQKRWRCVQGRACGATESLAYFAARDSMDIEGLGDKVIRALVTAGLVTDP
ADLYDLDADTLARLERLGRTSAAKLVANIQASKQQPLSRVLTGLGVRMTGRSMSRRLARH
FGTMEALCAATVDQLQEVAAVGPERAATIAAELADLAPVIAKLTERGITMSEPGVTPYHE
RVVATAETGLPLQKEDGTPMTVVVTGSVPGLTRNEGNEAVERLGGKSSGSVSKRTDLVVV
GDGAGSKAAKAEELGVRIMASDRFAALLAAHDAGEAPALDDY
NT seq 2109 nt   +upstreamnt  +downstreamnt
atgcctaccgagcccgagatcgcccccgtcgtcgacgcggcgcacgccgagccgttcgac
accgccgcggactaccgcgcggcgatcgagcggatccgggcggccgccgcggcctactac
gcgggcaccgacctggccatggacgacgccacctacgacgcgctgctggcccgggtcacc
gccaccgaggccgcgcgacccgggtggacggtcgccgagtcgcccagcgacacggtcggc
gccggcggcggcgtcaccggcgacgtgcagcacagcaccccgatgctgagcctggccaac
gtcttcgaccccgacgagctgctcgcctgggcggcccggctggaccgggtcctcggccgg
cccgccgccggctacaccgtggagccgaagatcgacggcatggcgatcgccgcccgctac
accgacggccggctggtccaggtcgccacccgcggcgacgggcgggccggggaggacgtc
accgcccaggcccggacggtcgccggcctgccggccgagctgacccggccggtcaccgtc
gaggtgcgcggcgaggtgttcatgaccgatgaggacttcacccgggccaacgaactgcgt
accgggcacggcggcgcaccgttcgccaacccgcgcaacgcggcggccggcacgctgcgc
gcgcaggaccgggcgtacgtcgcgccactctccttcctagcgtacgcggtgcacgacctg
cccggcggcgagggcctcacgcacagcgcggcgatggcggcgatcgccgagctcggggtg
gccacgaccggtggctcggcggccggcatggcggtctgcgccaccgccgacgagctggtc
gcggcgatcagccgcctcggcgcgctccgcgacaaactcggcttcgacatcgacggcgtg
gtcgtcaaggccgactcccccgccgaccgggacgccgccgggtcgtccagccgggcgccg
cgctgggcgatcgcctacaagttcccggccgacacccgcaccagccggctcaccgcgatc
gaggtgcaggtcggccggaccgggctgatcaccccggtcgcggtgatcgagccggtccag
gtcggcggcgtggtggtcacctcggccaccctgcacaacttcggcgacctggtgcggcgc
gacgtgcgggtcggcgacacggtcttcgtccggcgggccggcgaggtgatcccggagatc
accggggccaaactcgacgagcggcccgagggcgccgagccgttcgccgcgccggagcac
tgcccgcgctgcggcggcgacatcgaccggtcgcagaaacgctggcgatgcgtgcagggc
cgggcgtgcggcgccaccgagtccctggcgtacttcgcggcccgcgactcgatggacatc
gagggtctcggcgacaaggtgatccgcgcgctggtcacggccggcctggtcaccgacccg
gccgatctgtacgacctggacgccgacacgctcgcccggctcgagcgcctcggccgcacc
tcggcggcgaaactggtcgccaacatccaggcctccaaacagcagccgctgtcccgggtg
ctgaccggcctcggcgtgcggatgaccgggcggtcgatgtcgcgccggctggcccggcac
ttcggcaccatggaggcgctctgcgcggcgaccgtcgaccagctgcaggaggtggcggcg
gtcgggccggaacgtgccgccaccatcgcggccgagctggccgacctggcgccggtcatc
gccaagctcaccgagcgcgggatcacgatgagcgagccgggagtgacgccctaccacgag
cgggtggtggcgacggcagagaccgggctgccgttgcagaaggaggacggcacgccgatg
acggtggtggtgaccggatcggtgccgggcctgacccgcaacgagggcaacgaggcggtg
gaacgcctcggcggcaagtcgtccgggtcggtgtcgaaacggaccgacctggtggtggtc
ggtgacggcgccgggtcgaaagcggcgaaagctgaggagctgggggtccggatcatggcg
tcggaccggttcgcggcgctgctcgccgcgcacgacgccggggaggcgccggcgctcgac
gactactga

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