Actinoplanes sp. SE50/110: ACPL_7390
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Entry
ACPL_7390 CDS
T02044
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ase
Actinoplanes sp. SE50/110
Pathway
ase03030
DNA replication
ase03410
Base excision repair
ase03420
Nucleotide excision repair
ase03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ase00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACPL_7390 (ligA)
03410 Base excision repair
ACPL_7390 (ligA)
03420 Nucleotide excision repair
ACPL_7390 (ligA)
03430 Mismatch repair
ACPL_7390 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ase03032
]
ACPL_7390 (ligA)
03400 DNA repair and recombination proteins [BR:
ase03400
]
ACPL_7390 (ligA)
Enzymes [BR:
ase01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ACPL_7390 (ligA)
DNA replication proteins [BR:
ase03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACPL_7390 (ligA)
DNA repair and recombination proteins [BR:
ase03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ACPL_7390 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACPL_7390 (ligA)
MMR (mismatch excision repair)
DNA ligase
ACPL_7390 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACPL_7390 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
AEV88270
LinkDB
All DBs
Position
complement(8172948..8175389)
Genome browser
AA seq
813 aa
AA seq
DB search
MTTPSAEPTAVAAARHAELADEIRDHQYRYYVLDAPIISDGRFDTLLRELEALETEFPAL
RTPESPTQLVGGSFSSDFAPVRHAERMMSLDNVFSFDELSTWAERTVRDAGGPVAFLCEL
KVDGLAINLTYEKGRLVRGATRGDGRTGDDVTPNVRTIREIPERLAGDDVPDLLEVRGEI
YFPAEAFADLNASLVEQGKAPFANPRNAAAGSLRQKDPRVTASRGLRMVVHGIGAREGFH
PTSQSHAYEALRAWGLPTSSRWKLVDDMPAVREFIEYYGEHRHDVEHEIDGVVVKVDSVA
IQGRLGSTSRAPRWAIAFKYPPEEVTTRLLDIAVNVGRTGRVTPFAVLEPVLVAGSTVAQ
ATLHNAQEVARKGVLIGDTVVLRKAGDVIPEVLGPVIDLRPDDARAFVMPTECPSCGTTL
APAKENDVDIRCPNSESCPAQLLGRLATLASREVLDIEVLGEKSAAALLESGVLHNEGDL
FDLTEDDLLRVPFFVNKNGKLGTNAGKMLQSLAEAKGRPFARYLIALSIRHVGPTAATAL
AREYGSMDRLEEVLAQTAAQPAAVAASAEAASLAQAASAVEAASAAEAASTAEAAGTSAS
VAGSAASSGSVSSDASGSGAASPGTADPARGSDGADSADPTGEGDGADSADPTGEGDGVD
SAGAAVEQAKRKAKAIDPLAAVDGVGPIIADSLREWFTVPWHREIVRKWREAGVTMVDER
VEAGPRTLEGLTVVVTGTLAGFTRDQAAEAVTSRGGKVSGSVSKKTGFVVVGENPGGKHD
KAVSLKVPVLDEAGFEVLLKDGPEAAREVAELG
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacacccagcgcagagcccacggcggtggccgccgcccggcacgccgagctcgcc
gacgagatccgcgaccatcagtatcggtattacgtgctcgacgccccgatcatctccgac
ggccggttcgacacgctcctgcgcgagctggaggcgctggagaccgagttccccgcgctg
cgcacccccgaatcgccgacccagctcgtcggcggctcgttctccagcgacttcgccccg
gtgcggcacgccgagcggatgatgtcgctggacaacgtgttcagtttcgacgagctgagc
acctgggccgagcgcaccgtgcgggacgccggtggcccggtggcgttcctctgtgagctc
aaggtcgacggcctggcgatcaacctgacgtatgagaagggcaggctggtccgcggcgcc
acccggggcgacggccgcaccggcgacgacgtgacccccaacgtgcgcaccatccgcgag
atcccggagcggctggccggcgacgatgtgcccgacctgctcgaggtgcgcggcgagatc
tactttccggccgaggcgttcgccgatctgaacgcgtcgctggtcgagcagggcaaggcc
ccgttcgccaacccgcgcaacgccgccgccggcagcctccggcagaaggacccgcgggtc
accgcctcccgcggcctgcgcatggtggtgcacggcatcggcgcgcgcgagggtttccac
cccacctcgcagtcgcatgcctacgaggcactccgggcgtgggggctgcccaccagcagc
cggtggaaactcgtcgacgacatgcccgccgtccgagagttcatcgagtattacggcgag
caccggcacgacgtcgagcacgagatcgacggtgtcgtggtcaaggtcgactcggtggcg
atccagggccggctcggctccaccagccgggcgccgcgctgggcgatcgccttcaagtat
ccgcccgaggaggtcaccaccaggctcctcgacatcgcggtcaacgtcgggcgcaccggc
cgggtcaccccgttcgcggtgctggagccggtgctggtggccgggtccacggtcgcccag
gccaccctgcacaacgcgcaggaggtggcccgcaagggcgtgctgatcggcgacaccgtg
gtgctgcgcaaggccggcgacgtgatccccgaggtgctcggcccggtgatcgacctgcgc
ccggatgacgcccgggcgttcgtgatgcccaccgagtgcccgtcctgcggcaccaccctg
gccccggccaaggagaacgacgtcgacatccgctgccccaacagcgagtcctgcccggcc
cagctgctgggccggctggccaccctggcgagccgcgaggtgctcgacatcgaggtgctc
ggcgagaagtccgcggccgccctgctcgagtccggcgtcctgcacaacgagggcgacctg
ttcgacctgaccgaggacgacctgctgcgggtgccgttcttcgtcaacaagaacggcaag
ctcggtacgaatgccggcaagatgctgcagagcctggccgaggcgaagggccggccgttc
gcgcgctatctgatcgccctgtcgatccggcacgtgggaccgacggcggccaccgcgctg
gctcgggaatacgggtcgatggatcggctggaggaggtgctcgcccagaccgcggcgcag
ccggccgcggtcgcggccagcgctgaggccgcctccctcgcccaggccgcttccgccgtt
gaggccgcttccgccgctgaggccgcttccaccgccgaggccgccggcacctccgcctcg
gtcgccggatccgctgcctcttccgggtcggtctcctccgatgcgtccggctccggtgcg
gcttccccggggaccgcggacccggccaggggaagcgacggggcggattccgcggaccct
accggggagggcgacggggcggattccgcggacccgaccggagagggtgacggggtggat
tccgcgggggccgccgtcgagcaggcgaagcggaaggccaaggcgatcgatccactcgcc
gccgtcgacggggtcgggccgatcatcgcggacagtctgcgcgagtggttcaccgtgccg
tggcatcgggagatcgtccgcaagtggcgcgaggccggcgtgacgatggtcgacgagcgg
gtcgaggccggtccgcgcacgctggaggggctgaccgtggtggtcaccgggacgctggcc
ggcttcacccgggatcaggcggccgaggcggtcacctcccgcggcggcaaggtcagtggc
tcggtgtcgaagaagaccggcttcgtggtcgtcggggagaacccgggcggcaaacacgac
aaggccgtcagcctgaaggtgccggtgctcgacgaggccggcttcgaggtgctgctgaag
gacggtccggaggccgcgcgggaggttgccgagctgggctga
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