Aggregatibacter segnis: NCTC10977_00023
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Entry
NCTC10977_00023 CDS
T06075
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
aseg
Aggregatibacter segnis
Brite
KEGG Orthology (KO) [BR:
aseg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aseg03009
]
NCTC10977_00023 (rlmC)
Enzymes [BR:
aseg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
NCTC10977_00023 (rlmC)
Ribosome biogenesis [BR:
aseg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC10977_00023 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
UPF0020
Methyltransf_12
Methyltransf_25
Methyltransf_32
Methyltransf_15
Cons_hypoth95
PALP
GFO_IDH_MocA
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
SQH63540
LinkDB
All DBs
Position
1:complement(22679..23854)
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AA seq
391 aa
AA seq
DB search
MMQCEHYQRGDCRSCQWLELPYAVQLEQKTAHLQQQLQGLETSHLIWFAPFQSAQEGFRN
KAKMVVSGAVERPILGILPNPLAPQSAVDLCDCPLYPQRFQAIFPLLKDFIARAGLVPYN
VAKQKGELKHLLLTESQHSHQLMLRFVLRSEAKLPLIQRELAGLRQKLPQLAVISVNIQP
QNAAILEGEKEIFLTEQHTLPERFNQIPLFIRPQGFFQTNPQVAEGLYGTAQQWIKDLPI
RQLWDLFCGVGGFGLHCLKALQMQNTEQQIHLTGIEISASAIAAAKLSAQQLGLEKQVHF
QSLDAANFALAQADKPDLVIVNPPRRGIGQSLAEFLNEMRPHFILYSSCNAETMGKDLQS
LTHYQMEKIQLFDMFPHTSHYEVLVLLRLTP
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaatgtgaacattatcaacgaggcgattgtcgttcttgtcaatggttggaattg
ccctatgccgttcaactggaacagaaaacggcacatttgcaacagcagttgcagggttta
gaaacgtctcatttgatttggtttgccccttttcaatctgcccaagaagggtttcgcaac
aaagccaaaatggtcgtcagtggcgcagttgaacgcccaatcctcgggatcttgccgaac
ccgttggcgccacaaagtgcggtggatttatgcgattgcccactttatccacaacgtttt
caagctatctttcctcttcttaaagatttcatcgcacgcgcaggccttgtgccgtataac
gtggcaaagcaaaaaggcgaattgaaacatcttttattgacagaaagccaacacagccac
caactcatgttgcgctttgtgttacgttcggaagccaaattgccgttgattcaacgtgaa
ctggcgggattgcgtcaaaaattgccgcaacttgccgtcattagcgtgaatatccagccg
caaaatgccgcaattctcgagggtgaaaaagagattttcctgacggaacaacacacctta
cccgaaaggtttaatcagattccgctttttattcgtccgcaggggttctttcaaactaac
ccgcaggttgctgaagggttatacggcacggcacaacaatggataaaagacctgcccatt
cgtcaactttgggatttgttctgtggtgtgggcggtttcgggttacattgcttgaaagcc
ttgcaaatgcagaacacggagcaacaaattcacctcaccggcattgaaatctccgcttct
gccattgccgccgcgaaactatcggcacagcaactcggattggagaagcaagttcatttt
caatctttagatgcggcaaattttgccttggctcaagcagacaaacccgatctggttatc
gtcaatccccctcgtcgcggcattggtcaatcgcttgctgaatttctcaatgaaatgcga
ccgcactttattttgtattccagttgcaatgccgaaaccatgggcaaagacttgcaatcc
cttacccattatcaaatggaaaaaatccaactgttcgatatgttcccacatacgtcgcat
tatgaggtgttagtgttgttgagattgacgccttaa
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