Achromobacter seleniivolatilans: RAS12_19455
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Entry
RAS12_19455 CDS
T09953
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
asel
Achromobacter seleniivolatilans
Pathway
asel00270
Cysteine and methionine metabolism
asel00450
Selenocompound metabolism
asel00670
One carbon pool by folate
asel01100
Metabolic pathways
asel01110
Biosynthesis of secondary metabolites
asel01230
Biosynthesis of amino acids
asel04980
Cobalamin transport and metabolism
asel04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RAS12_19455 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RAS12_19455 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RAS12_19455 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RAS12_19455 (metH)
04980 Cobalamin transport and metabolism
RAS12_19455 (metH)
Enzymes [BR:
asel01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
RAS12_19455 (metH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
WMD18792
LinkDB
All DBs
Position
complement(4315056..4318829)
Genome browser
AA seq
1257 aa
AA seq
DB search
MSYPRLPYPPEAYTQGSEFARLLGKRILILDGAMGTMIQRYKLGEADFRGQRFADHGKDV
KGNNELLSLVRPDVISEIHRQYLEAGADVIETNTFGATTIAQGDYDLPELAYELNLVSAQ
LAREACDLFSTPDKPRFVAGALGPQPKTASISPDVNDPGARNVTFNELRVAYIEQLNGLL
DGGIDIVLIETIFDTLNAKAAIFATEEVFEARGVRLPVMISGTVTDASGRILSGQTVEAF
WNSIRHARPITVGLNCALGAALMRPYVAELSKISDTYVCVYPNAGLPNPMAETGFDETPA
DTSALLEEFARAGLVNMSGGCCGTTPDHIRAIADKVTALTPRAVPDIPVKTRLSGLEPLN
IDEDTLYVNVGERTNVTGSKMFARLIREEKYDEALAVARQQVENGAQIIDINMDEAMLDS
VACMHRFLNLIASEPDIARVPVMIDSSKWDVIETGLKCVQGKPVVNSISMKEGLEPFRRQ
ARLCRRYGAAVVVMAFDELGQADTLERRKEICGRAYKILVEEEGFPPEDIIFDPNVFAVA
TGIDEHNHYAVDFIEGTRWIRDNLPHARISGGVSNVSFSFRGNEAMREAIHTVFLYYAVK
EGMTMGIVNAGQLGVYADLDPKLRDLVEDVVLDRPEPVGKTEADDERTPTERLVQFADTV
KGSGAKREEDLTWRNAEVEKRLSHALVHGITAFIVEDTEEVRQKIFDRGGRPIEVIEGPL
MDGMNVVGDLFGEGKMFLPQVVKSARVMKQAVAHLIPFIEEEKRQIAAAGGDVRAKGKIV
IATVKGDVHDIGKNIVSVVLQCNNFEVVNMGVMVPCAQILEKAKEEQADIVGLSGLITPS
LEEMAYVASEMQRDEYFRSRKVPLMIGGATTSRVHTAVKIAPHYDGPVIYVPDASRSVGV
ATNLMSDQSETWLADLAQEYEEVRRRHANRKATPILPLADARASRPVIDWDNYTPPRPKF
IGRRTFKSYDLAEIVKYVDWGPFFQTWSLFGPFPAILDDKVVGEQARKVYADGLAMMKRI
VEGRWLTANGVVGFYPANSVNDEDIEIYKDETRSEVLFTYRNLRQQGAKREGVSNKSLSD
FIAPKSSGKIDYIGMFAVTAGLGIEKKEAEFEKALDDYSSIMLKSLADRLAEGFAECLHA
RVRQDLWGYAPDEALSNEDMIAEKYVGIRPAPGYPACPEHVVKTDMFRVLDGADIGMMLT
DSYAMFPASSVSGFYFSHPDSQYFNVGVIGEDQVEDYAKRSGRTIEDLKRTLSPNLG
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtatccccgtctgccttacccgcccgaagcctatacccagggcagcgaattcgcc
cgtctattgggcaagcgcatcctgatcctggacggcgcgatgggcaccatgatccagcgc
tacaaattgggcgaggccgacttccgcggccagcgttttgccgatcacggcaaggacgtc
aaaggcaataacgaactgctgtcgctggtgcggcccgacgtgatctccgagatccatcgg
cagtacctggaagccggcgctgacgttattgagaccaacaccttcggcgccaccaccatt
gcgcagggcgactacgacctgccggaactggcctacgaattgaacctggtgtccgcgcag
ctggcgcgcgaggcctgtgacctgttcagcaccccggacaagccgcgttttgtggccgga
gccctgggcccgcaacccaagacggcatcgatctcgcctgacgtgaacgacccgggcgcc
cgcaacgtgacgttcaacgaactgcgtgttgcctatatagagcagctcaatggtttgctg
gacggcggcatcgacatcgtcctgatcgaaaccatttttgacaccctgaacgccaaagcc
gcgatcttcgccaccgaagaagtcttcgaagcgcggggcgtccgcctgcccgtgatgatc
tcgggcaccgtcaccgacgcatccggccgcattctgtcaggccagaccgtcgaagccttc
tggaattcaatacgccacgcgcgccccatcaccgtgggtctgaactgcgcgctgggcgcc
gcattgatgcgcccgtatgtggccgagctgtccaaaatcagcgacacctacgtttgcgtg
tatcccaacgccggcctgcccaaccccatggccgaaacgggctttgacgaaacgcccgcc
gatacgtccgcgctgctggaggaattcgcccgcgccggactggtgaacatgtcgggcggc
tgttgcggcaccacgcccgaccacatccgcgcgattgccgacaaggtcaccgcgctgacg
ccgcgcgccgtgccggacattccggtgaagacgcgcctgtccggcctggaaccgctcaac
atcgacgaagacacgctgtacgtcaacgtgggcgaacgcaccaacgtgacgggcagcaag
atgtttgcccgcctgatccgcgaagaaaaatacgacgaggcgctggccgttgcccgccag
caggtcgagaacggcgcgcagatcatcgacatcaacatggacgaggccatgctggattcg
gtggcgtgcatgcaccgcttcctgaacctgattgcgtccgaacccgacatcgctcgcgtg
cccgtcatgatcgacagttccaagtgggacgtgatcgagaccggcctgaagtgcgtgcag
ggcaagccggttgtgaactcgatttccatgaaggaagggcttgagcccttccgccgccag
gcgcgcctgtgccgccgctacggcgccgccgtggtggtcatggcattcgacgaactgggt
caggccgacacgcttgagcgccgcaaggaaatctgcggccgcgcctacaagattctggtc
gaagaagaaggcttcccgccggaagacatcattttcgatcccaacgtctttgccgtggca
accggtatcgacgagcataaccactacgcggtggacttcattgaaggcacccgctggata
cgcgacaacctgccgcatgcccgcatttcgggcggcgtgtccaacgtcagcttctcgttc
cgcggcaatgaggccatgcgcgaagccatccacaccgtcttcctgtactacgcggtcaag
gaaggcatgacgatgggcatcgtcaacgccggccagttgggcgtgtacgccgatctcgat
cccaagttgcgcgatctggtggaagacgtggtgctggaccggcccgaacccgtcggcaag
accgaagccgatgacgaacgcacgccgaccgaacgtctggtgcagttcgccgacacggta
aaaggctcgggcgccaaacgcgaagaagatctgacctggcgtaacgccgaagtcgaaaag
cgcctgtcgcacgcgctggtgcatggcatcaccgcctttatcgtcgaagacaccgaagaa
gtgcgccagaagatcttcgaccgcggcggccgcccgatcgaagtcattgaaggcccgctg
atggacggcatgaacgtcgtcggcgacctgttcggcgaaggcaagatgttcctgccgcag
gtggttaaatccgcgcgcgtcatgaagcaggccgtggcccacctgattcccttcattgaa
gaagaaaagcgtcagatcgcagctgccggcggcgatgtgcgcgccaagggcaagatcgtc
atcgccaccgtcaagggtgatgtgcacgacatcggcaagaacattgtgtcggtcgtcttg
cagtgcaataacttcgaagtcgtgaacatgggcgtgatggtgccctgcgcgcagatcctg
gaaaaggccaaggaagaacaggccgacatcgtcggcttgtccgggcttatcacgcccagc
ctggaagaaatggcgtacgtggcatccgagatgcagcgcgacgaatacttccgcagccgc
aaggtgccgctgatgatcggcggcgccaccaccagccgcgtgcacaccgccgtgaagatc
gcgccgcattacgacggcccggttatctatgtgccggacgccagccgttcggtgggcgtg
gctaccaacctgatgtcggatcaatcggaaacctggctggcggatctggcccaggagtac
gaagaagtgcgccgccgtcacgccaatcgcaaggccacgccgatcctgccgctggcagat
gcgcgcgcctcgcgtcccgtgatcgactgggacaactacaccccgccgcgccccaagttt
atcggccgccgcacgttcaagagctatgacctggccgaaatcgtgaagtacgtggactgg
ggtccgttcttccagacctggagcctgttcggcccgttccccgccatcctggacgacaag
gtcgtgggcgagcaggcccgcaaggtctacgccgacggtctggccatgatgaagcgcatc
gtcgaaggccgctggctgaccgccaacggcgtggtcggcttctatccggccaacagcgtc
aacgacgaagacatcgaaatctacaaggacgagacgcgcagcgaagtgctgtttacgtat
cgcaacctgcgccagcaaggcgccaaacgcgagggcgtcagcaacaagtccttgtccgac
ttcatcgcgcccaagtcctccggcaagatcgactacatcggcatgttcgccgttacggcc
ggcctgggtatcgagaagaaagaagccgagttcgaaaaggcgctggacgactattccagc
atcatgctgaagtccctggccgaccgcctggccgaaggtttcgctgaatgcctgcacgcc
cgcgtgcgccaggacttgtggggttatgcgcccgatgaagcgctttccaacgaagacatg
atcgccgagaaatacgtcggcatccgccccgcgccgggttatccggcttgcccggaacac
gtggtcaagaccgatatgttccgcgtgctggacggtgctgacatcggcatgatgctgacc
gacagctacgccatgttcccggcgtccagcgtctctggcttctacttcagccacccggat
tctcaatacttcaacgtgggcgtgatcggggaagatcaggtggaagattatgccaagcgc
agcggccgcacgattgaagacctgaagcgtacgctgtcgccgaatctgggctga
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